RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 RIPK4P57078 832 aa20.31■□□□□ 0.84
FDPS-208ENST00000470171 KLHL34Q8N239 644 aa20.31■□□□□ 0.84
FDPS-208ENST00000470171 ANP32CO43423 234 aa20.3■□□□□ 0.84
FDPS-208ENST00000470171 TMPOP42166 694 aaKnown RBP20.3■□□□□ 0.84
FDPS-208ENST00000470171 TGFB2P61812 414 aa20.3■□□□□ 0.84
FDPS-208ENST00000470171 UBR3Q6ZT12 1888 aa20.29■□□□□ 0.84
FDPS-208ENST00000470171 GPR162Q16538 588 aa20.29■□□□□ 0.84
FDPS-208ENST00000470171 ZBTB1Q9Y2K1 713 aa20.29■□□□□ 0.84
FDPS-208ENST00000470171 DCTN1Q14203 1278 aa20.28■□□□□ 0.84
FDPS-208ENST00000470171 ADAMTS8Q9UP79 889 aa20.28■□□□□ 0.84
FDPS-208ENST00000470171 COL15A1P39059 1388 aa20.28■□□□□ 0.84
FDPS-208ENST00000470171 COL5A3P25940 1745 aaPredicted RBP20.27■□□□□ 0.84
FDPS-208ENST00000470171 CANXP27824 592 aaKnown RBP20.27■□□□□ 0.84
FDPS-208ENST00000470171 SMIM5Q71RC9 77 aa20.27■□□□□ 0.84
FDPS-208ENST00000470171 TUBGCP6Q96RT7 1819 aa20.27■□□□□ 0.84
FDPS-208ENST00000470171 CALD1Q05682 793 aaKnown RBP20.26■□□□□ 0.83
FDPS-208ENST00000470171 TM4SF1P30408 202 aa20.25■□□□□ 0.83
FDPS-208ENST00000470171 FKBP8Q14318 412 aa20.24■□□□□ 0.83
FDPS-208ENST00000470171 USPL1Q5W0Q7 1092 aa20.24■□□□□ 0.83
FDPS-208ENST00000470171 CLEC4GQ6UXB4 293 aa20.24■□□□□ 0.83
FDPS-208ENST00000470171 KCNQ3O43525 872 aa20.23■□□□□ 0.83
FDPS-208ENST00000470171 EIF4A1P60842 406 aaKnown RBP20.23■□□□□ 0.83
FDPS-208ENST00000470171 TJP1Q07157 1748 aa20.23■□□□□ 0.83
FDPS-208ENST00000470171 NCBP3Q53F19 620 aaKnown RBP20.23■□□□□ 0.83
FDPS-208ENST00000470171 NLGN2Q8NFZ4 835 aa20.23■□□□□ 0.83
FDPS-208ENST00000470171 PDZRN3Q9UPQ7 1066 aa20.23■□□□□ 0.83
FDPS-208ENST00000470171 USP16Q9Y5T5 823 aa20.23■□□□□ 0.83
FDPS-208ENST00000470171 UBR2Q8IWV8 1755 aa20.23■□□□□ 0.83
FDPS-208ENST00000470171 ERBB4Q15303 1308 aa20.23■□□□□ 0.83
FDPS-208ENST00000470171 GIGYF1O75420 1035 aaPredicted RBP20.22■□□□□ 0.83
FDPS-208ENST00000470171 SRP68Q9UHB9 627 aaKnown RBP20.22■□□□□ 0.83
FDPS-208ENST00000470171 TSPYL4Q9UJ04 414 aa20.22■□□□□ 0.83
FDPS-208ENST00000470171 ZNF652Q9Y2D9 606 aa20.22■□□□□ 0.83
FDPS-208ENST00000470171 YY1P25490 414 aa20.21■□□□□ 0.83
FDPS-208ENST00000470171 CHMP4AQ9BY43 222 aa20.21■□□□□ 0.83
FDPS-208ENST00000470171 A1BGP04217 495 aa20.2■□□□□ 0.82
FDPS-208ENST00000470171 SIPA1L3O60292 1781 aaPredicted RBP20.19■□□□□ 0.82
FDPS-208ENST00000470171 POLRMTO00411 1230 aaKnown RBP20.19■□□□□ 0.82
FDPS-208ENST00000470171 CCDC146Q8IYE0 955 aa20.19■□□□□ 0.82
FDPS-208ENST00000470171 C10orf71Q711Q0 1435 aa20.19■□□□□ 0.82
FDPS-208ENST00000470171 CHL1O00533 1208 aa20.18■□□□□ 0.82
FDPS-208ENST00000470171 NFIXQ14938 502 aa20.18■□□□□ 0.82
FDPS-208ENST00000470171 DZIP3Q86Y13 1208 aaKnown RBP20.18■□□□□ 0.82
FDPS-208ENST00000470171 MIS18AQ9NYP9 233 aa20.18■□□□□ 0.82
FDPS-208ENST00000470171 HOXB7P09629 217 aa20.17■□□□□ 0.82
FDPS-208ENST00000470171 THUMPD2Q9BTF0 503 aaKnown RBP20.17■□□□□ 0.82
FDPS-208ENST00000470171 DDR1Q08345 913 aa20.16■□□□□ 0.82
FDPS-208ENST00000470171 NEUROD2Q15784 382 aa20.16■□□□□ 0.82
FDPS-208ENST00000470171 PELP1Q8IZL8 1130 aaKnown RBP20.16■□□□□ 0.82
FDPS-208ENST00000470171 CFAP44Q96MT7 982 aa20.16■□□□□ 0.82
FDPS-208ENST00000470171 SETDB2Q96T68 719 aa20.16■□□□□ 0.82
FDPS-208ENST00000470171 BCL2L12Q9HB09 334 aa20.16■□□□□ 0.82
FDPS-208ENST00000470171 TRIM35Q9UPQ4 493 aa20.16■□□□□ 0.82
FDPS-208ENST00000470171 ZNF330Q9Y3S2 320 aaPredicted RBP20.16■□□□□ 0.82
FDPS-208ENST00000470171 MYH14Q7Z406 1995 aaKnown RBP20.15■□□□□ 0.82
FDPS-208ENST00000470171 ERVV-1B6SEH8 477 aa20.15■□□□□ 0.82
FDPS-208ENST00000470171 CAMTA2O94983 1202 aa20.15■□□□□ 0.82
FDPS-208ENST00000470171 SERPINB2P05120 415 aa20.15■□□□□ 0.82
FDPS-208ENST00000470171 TBC1D2BQ9UPU7 963 aa20.15■□□□□ 0.82
FDPS-208ENST00000470171 CARMIL3Q8ND23 1372 aa20.14■□□□□ 0.81
FDPS-208ENST00000470171 CCDC27Q2M243 656 aa20.14■□□□□ 0.81
FDPS-208ENST00000470171 NGEFQ8N5V2 710 aa20.14■□□□□ 0.81
FDPS-208ENST00000470171 PIM2Q9P1W9 311 aa20.14■□□□□ 0.81
FDPS-208ENST00000470171 RRP7AQ9Y3A4 280 aaKnown RBP20.14■□□□□ 0.81
FDPS-208ENST00000470171 APAF1O14727 1248 aa20.13■□□□□ 0.81
FDPS-208ENST00000470171 MRS2Q9HD23 443 aa20.13■□□□□ 0.81
FDPS-208ENST00000470171 PRAMEF22A3QJZ6 481 aa20.12■□□□□ 0.81
FDPS-208ENST00000470171 NBPF26B4DH59 902 aa20.12■□□□□ 0.81
FDPS-208ENST00000470171 GNAI1P63096 354 aa20.12■□□□□ 0.81
FDPS-208ENST00000470171 NBPF10Q6P3W6 841 aaKnown RBP20.12■□□□□ 0.81
FDPS-208ENST00000470171 NBPF15Q8N660 670 aa20.12■□□□□ 0.81
FDPS-208ENST00000470171 IFT57Q9NWB7 429 aa20.12■□□□□ 0.81
FDPS-208ENST00000470171 C4AP0C0L4 1744 aa20.12■□□□□ 0.81
FDPS-208ENST00000470171 YBX3P16989 372 aaKnown RBP eCLIP20.11■□□□□ 0.81
FDPS-208ENST00000470171 PDE6BP35913 854 aa20.11■□□□□ 0.81
FDPS-208ENST00000470171 KIF6Q6ZMV9 814 aa20.11■□□□□ 0.81
FDPS-208ENST00000470171 BRIP1Q9BX63 1249 aa20.11■□□□□ 0.81
FDPS-208ENST00000470171 PXDNLA1KZ92 1463 aa20.11■□□□□ 0.81
FDPS-208ENST00000470171 A0A0G2JLW4 131 aa20.1■□□□□ 0.81
FDPS-208ENST00000470171 DPEP1P16444 411 aa20.1■□□□□ 0.81
FDPS-208ENST00000470171 TBC1D9BQ66K14 1250 aa20.1■□□□□ 0.81
FDPS-208ENST00000470171 VIRMAQ69YN4 1812 aaKnown RBP20.09■□□□□ 0.81
FDPS-208ENST00000470171 ST5P78524 1137 aa20.09■□□□□ 0.81
FDPS-208ENST00000470171 DALRD3Q5D0E6 543 aaKnown RBP20.09■□□□□ 0.81
FDPS-208ENST00000470171 TPTE2Q6XPS3 522 aa20.09■□□□□ 0.81
FDPS-208ENST00000470171 H0YIN7 160 aa20.08■□□□□ 0.81
FDPS-208ENST00000470171 NPHP1O15259 732 aa20.08■□□□□ 0.81
FDPS-208ENST00000470171 ZNF853P0CG23 659 aa20.08■□□□□ 0.81
FDPS-208ENST00000470171 CNBD1Q8NA66 436 aa20.08■□□□□ 0.81
FDPS-208ENST00000470171 KCNA3P22001 575 aa20.07■□□□□ 0.8
FDPS-208ENST00000470171 BICDL1Q6ZP65 573 aa20.07■□□□□ 0.8
FDPS-208ENST00000470171 NYXQ9GZU5 481 aa20.07■□□□□ 0.8
FDPS-208ENST00000470171 MAP3K15Q6ZN16 1313 aa20.06■□□□□ 0.8
FDPS-208ENST00000470171 NBPF5PQ86XG9 351 aaPredicted RBP20.06■□□□□ 0.8
FDPS-208ENST00000470171 BCS1LQ9Y276 419 aa20.06■□□□□ 0.8
FDPS-208ENST00000470171 LAS1LQ9Y4W2 734 aaKnown RBP20.06■□□□□ 0.8
FDPS-208ENST00000470171 DDX21Q9NR30 783 aaKnown RBP eCLIP20.05■□□□□ 0.8
FDPS-208ENST00000470171 IL16Q14005 1332 aa20.04■□□□□ 0.8
FDPS-208ENST00000470171 EIF2S2P20042 333 aaKnown RBP20.04■□□□□ 0.8
FDPS-208ENST00000470171 HSP90AB3PQ58FF7 597 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms