RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 ANKRD44Q8N8A2 993 aa11.7□□□□□ -0.54
SMC1A-205ENST00000469129 NECTIN2Q92692 538 aa11.7□□□□□ -0.54
SMC1A-205ENST00000469129 FMNL2Q96PY5 1086 aa11.7□□□□□ -0.54
SMC1A-205ENST00000469129 HYPKQ9NX55 129 aa11.7□□□□□ -0.54
SMC1A-205ENST00000469129 BTG4Q9NY30 223 aa11.7□□□□□ -0.54
SMC1A-205ENST00000469129 CHPF2Q9P2E5 772 aa11.7□□□□□ -0.54
SMC1A-205ENST00000469129 CICQ96RK0 1608 aaPredicted RBP11.7□□□□□ -0.54
SMC1A-205ENST00000469129 IBTKQ9P2D0 1353 aaPredicted RBP11.69□□□□□ -0.54
SMC1A-205ENST00000469129 KCNQ3O43525 872 aa11.69□□□□□ -0.54
SMC1A-205ENST00000469129 DDX58O95786 925 aaKnown RBP11.69□□□□□ -0.54
SMC1A-205ENST00000469129 C1orf115Q9H7X2 142 aa11.69□□□□□ -0.54
SMC1A-205ENST00000469129 ZBTB47Q9UFB7 747 aaPredicted RBP11.69□□□□□ -0.54
SMC1A-205ENST00000469129 AK9Q5TCS8 1911 aa11.68□□□□□ -0.54
SMC1A-205ENST00000469129 ERBB4Q15303 1308 aa11.68□□□□□ -0.54
SMC1A-205ENST00000469129 TUBGCP6Q96RT7 1819 aa11.68□□□□□ -0.54
SMC1A-205ENST00000469129 F6X3S4 739 aa11.68□□□□□ -0.54
SMC1A-205ENST00000469129 GNAI2P04899 355 aa11.68□□□□□ -0.54
SMC1A-205ENST00000469129 NUCB1Q02818 461 aa11.68□□□□□ -0.54
SMC1A-205ENST00000469129 SKAP1Q86WV1 359 aa11.68□□□□□ -0.54
SMC1A-205ENST00000469129 NFATC2IPQ8NCF5 419 aa11.68□□□□□ -0.54
SMC1A-205ENST00000469129 DNAAF4Q8WXU2 420 aa11.68□□□□□ -0.54
SMC1A-205ENST00000469129 MEIS3Q99687 375 aa11.68□□□□□ -0.54
SMC1A-205ENST00000469129 CDCA7Q9BWT1 371 aaPredicted RBP11.68□□□□□ -0.54
SMC1A-205ENST00000469129 SRCIN1Q9C0H9 1055 aa11.68□□□□□ -0.54
SMC1A-205ENST00000469129 DDX21Q9NR30 783 aaKnown RBP eCLIP11.68□□□□□ -0.54
SMC1A-205ENST00000469129 ANKRD36CQ5JPF3 1778 aa11.67□□□□□ -0.54
SMC1A-205ENST00000469129 SNRPA1P09661 255 aaKnown RBP11.67□□□□□ -0.54
SMC1A-205ENST00000469129 CEP85Q6P2H3 762 aa11.67□□□□□ -0.54
SMC1A-205ENST00000469129 CHD1LQ86WJ1 897 aa11.67□□□□□ -0.54
SMC1A-205ENST00000469129 FNBP4Q8N3X1 1017 aaPredicted RBP11.67□□□□□ -0.54
SMC1A-205ENST00000469129 USP21Q9UK80 565 aa11.67□□□□□ -0.54
SMC1A-205ENST00000469129 HDAC5Q9UQL6 1122 aa11.67□□□□□ -0.54
SMC1A-205ENST00000469129 ADCY9O60503 1353 aa11.67□□□□□ -0.54
SMC1A-205ENST00000469129 SLIT2O94813 1529 aa11.66□□□□□ -0.54
SMC1A-205ENST00000469129 UBTFL1P0CB47 393 aaPredicted RBP11.66□□□□□ -0.54
SMC1A-205ENST00000469129 RXRBP28702 533 aa11.66□□□□□ -0.54
SMC1A-205ENST00000469129 C8orf34Q49A92 452 aa11.66□□□□□ -0.54
SMC1A-205ENST00000469129 PHAXQ9H814 394 aaKnown RBP11.66□□□□□ -0.54
SMC1A-205ENST00000469129 QTRT2Q9H974 415 aaKnown RBP11.66□□□□□ -0.54
SMC1A-205ENST00000469129 THRAP3Q9Y2W1 955 aaKnown RBP11.66□□□□□ -0.54
SMC1A-205ENST00000469129 TJP1Q07157 1748 aa11.66□□□□□ -0.54
SMC1A-205ENST00000469129 ALDH1L1O75891 902 aa11.65□□□□□ -0.54
SMC1A-205ENST00000469129 KSR2Q6VAB6 950 aa11.65□□□□□ -0.54
SMC1A-205ENST00000469129 ZNF496Q96IT1 587 aaPredicted RBP11.65□□□□□ -0.54
SMC1A-205ENST00000469129 DCTPP1Q9H773 170 aa11.65□□□□□ -0.54
SMC1A-205ENST00000469129 BCL9LQ86UU0 1499 aa11.64□□□□□ -0.55
SMC1A-205ENST00000469129 ATRNO75882 1429 aa11.64□□□□□ -0.55
SMC1A-205ENST00000469129 SLC39A6Q13433 755 aa11.64□□□□□ -0.55
SMC1A-205ENST00000469129 SIRT2Q8IXJ6 389 aa11.64□□□□□ -0.55
SMC1A-205ENST00000469129 TRPC5Q9UL62 973 aaPredicted RBP11.64□□□□□ -0.55
SMC1A-205ENST00000469129 ZNF831Q5JPB2 1677 aa11.64□□□□□ -0.55
SMC1A-205ENST00000469129 KAT6BQ8WYB5 2073 aa11.64□□□□□ -0.55
SMC1A-205ENST00000469129 PI4KAP2A4QPH2 592 aa11.63□□□□□ -0.55
SMC1A-205ENST00000469129 EIF5BO60841 1220 aaKnown RBP11.63□□□□□ -0.55
SMC1A-205ENST00000469129 RBM6P78332 1123 aaKnown RBP11.63□□□□□ -0.55
SMC1A-205ENST00000469129 ANKRD45Q5TZF3 282 aa11.63□□□□□ -0.55
SMC1A-205ENST00000469129 PI4KAP1Q8N8J0 262 aa11.63□□□□□ -0.55
SMC1A-205ENST00000469129 DDX54Q8TDD1 881 aaKnown RBP11.63□□□□□ -0.55
SMC1A-205ENST00000469129 LNPKQ9C0E8 428 aa11.63□□□□□ -0.55
SMC1A-205ENST00000469129 UPF2Q9HAU5 1272 aaKnown RBP11.63□□□□□ -0.55
SMC1A-205ENST00000469129 TMOD3Q9NYL9 352 aa11.63□□□□□ -0.55
SMC1A-205ENST00000469129 NEXNQ0ZGT2 675 aa11.62□□□□□ -0.55
SMC1A-205ENST00000469129 BEND3Q5T5X7 828 aa11.62□□□□□ -0.55
SMC1A-205ENST00000469129 DDRGK1Q96HY6 314 aa11.62□□□□□ -0.55
SMC1A-205ENST00000469129 USP35Q9P2H5 1018 aa11.62□□□□□ -0.55
SMC1A-205ENST00000469129 MAP3K2Q9Y2U5 619 aa11.62□□□□□ -0.55
SMC1A-205ENST00000469129 RREB1Q92766 1687 aa11.62□□□□□ -0.55
SMC1A-205ENST00000469129 SPATA31A1Q5TZJ5 1347 aa11.61□□□□□ -0.55
SMC1A-205ENST00000469129 ANXA1P04083 346 aa11.61□□□□□ -0.55
SMC1A-205ENST00000469129 UNC5CLQ8IV45 518 aa11.61□□□□□ -0.55
SMC1A-205ENST00000469129 LINS1Q8NG48 757 aa11.61□□□□□ -0.55
SMC1A-205ENST00000469129 BCL9O00512 1426 aa11.6□□□□□ -0.55
SMC1A-205ENST00000469129 COL5A3P25940 1745 aaPredicted RBP11.6□□□□□ -0.55
SMC1A-205ENST00000469129 THSD7AQ9UPZ6 1657 aa11.6□□□□□ -0.55
SMC1A-205ENST00000469129 PRAMEF22A3QJZ6 481 aa11.6□□□□□ -0.55
SMC1A-205ENST00000469129 EXOC5O00471 708 aa11.6□□□□□ -0.55
SMC1A-205ENST00000469129 ATP8B2P98198 1209 aa11.6□□□□□ -0.55
SMC1A-205ENST00000469129 PDIA6Q15084 440 aa11.6□□□□□ -0.55
SMC1A-205ENST00000469129 PROSER3Q2NL68 480 aa11.6□□□□□ -0.55
SMC1A-205ENST00000469129 BMP2KLQ5H9B9 411 aa11.6□□□□□ -0.55
SMC1A-205ENST00000469129 RIC3Q7Z5B4 369 aa11.6□□□□□ -0.55
SMC1A-205ENST00000469129 NPM2Q86SE8 214 aaKnown RBP11.6□□□□□ -0.55
SMC1A-205ENST00000469129 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
SMC1A-205ENST00000469129 TEX13AQ9BXU3 409 aaPredicted RBP11.6□□□□□ -0.55
SMC1A-205ENST00000469129 USP44Q9H0E7 712 aa11.6□□□□□ -0.55
SMC1A-205ENST00000469129 LRRFIP2Q9Y608 721 aaKnown RBP11.6□□□□□ -0.55
SMC1A-205ENST00000469129 MYH3P11055 1940 aa11.6□□□□□ -0.55
SMC1A-205ENST00000469129 IPO9Q96P70 1041 aaKnown RBP11.59□□□□□ -0.55
SMC1A-205ENST00000469129 C9orf78Q9NZ63 289 aaPredicted RBP11.59□□□□□ -0.55
SMC1A-205ENST00000469129 SPATA31A5Q5VU36 1347 aa11.59□□□□□ -0.55
SMC1A-205ENST00000469129 SPATA31A7Q8IWB4 1347 aa11.59□□□□□ -0.55
SMC1A-205ENST00000469129 NHSQ6T4R5 1651 aa11.59□□□□□ -0.55
SMC1A-205ENST00000469129 NUP98P52948 1817 aa11.58□□□□□ -0.56
SMC1A-205ENST00000469129 MYL6BP14649 208 aa11.58□□□□□ -0.56
SMC1A-205ENST00000469129 HSP90AB4PQ58FF6 505 aa11.58□□□□□ -0.56
SMC1A-205ENST00000469129 BARGINQ6ZT62 677 aa11.58□□□□□ -0.56
SMC1A-205ENST00000469129 XAGE3Q8WTP9 111 aa11.58□□□□□ -0.56
SMC1A-205ENST00000469129 GJD4Q96KN9 370 aaPredicted RBP11.58□□□□□ -0.56
SMC1A-205ENST00000469129 UTYO14607 1347 aa11.58□□□□□ -0.56
SMC1A-205ENST00000469129 COL15A1P39059 1388 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms