RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 IRX5P78411 483 aaPredicted RBP14.91□□□□□ -0.02
USP11-206ENST00000469080 MAP3K2Q9Y2U5 619 aa14.91□□□□□ -0.02
USP11-206ENST00000469080 KIAA1210Q9ULL0 1709 aa14.91□□□□□ -0.02
USP11-206ENST00000469080 TTC21AQ8NDW8 1320 aa14.91□□□□□ -0.02
USP11-206ENST00000469080 PLEKHG1Q9ULL1 1385 aa14.91□□□□□ -0.02
USP11-206ENST00000469080 LRRCC1Q9C099 1032 aa14.91□□□□□ -0.02
USP11-206ENST00000469080 CCDC8Q9H0W5 538 aaPredicted RBP14.91□□□□□ -0.02
USP11-206ENST00000469080 NDUFB9Q9Y6M9 179 aa14.91□□□□□ -0.02
USP11-206ENST00000469080 PPFIA3O75145 1194 aa14.9□□□□□ -0.02
USP11-206ENST00000469080 GSPT1P15170 499 aaKnown RBP14.9□□□□□ -0.02
USP11-206ENST00000469080 NASPP49321 788 aaPredicted RBP14.9□□□□□ -0.02
USP11-206ENST00000469080 CWC27Q6UX04 472 aaKnown RBP14.9□□□□□ -0.02
USP11-206ENST00000469080 HDAC5Q9UQL6 1122 aa14.9□□□□□ -0.02
USP11-206ENST00000469080 NLRP1Q9C000 1473 aa14.9□□□□□ -0.02
USP11-206ENST00000469080 NUTM2BA6NNL0 878 aaPredicted RBP14.9□□□□□ -0.02
USP11-206ENST00000469080 NUTM2EB1AL46 878 aaPredicted RBP14.9□□□□□ -0.02
USP11-206ENST00000469080 NUTM2AQ8IVF1 878 aaPredicted RBP14.9□□□□□ -0.02
USP11-206ENST00000469080 PNPLA6Q8IY17 1366 aa14.89□□□□□ -0.03
USP11-206ENST00000469080 RIMS1Q86UR5 1692 aaKnown RBP14.89□□□□□ -0.03
USP11-206ENST00000469080 PATL2C9JE40 543 aaKnown RBP14.89□□□□□ -0.03
USP11-206ENST00000469080 CCT4P50991 539 aaKnown RBP14.89□□□□□ -0.03
USP11-206ENST00000469080 ANKRD44Q8N8A2 993 aa14.89□□□□□ -0.03
USP11-206ENST00000469080 CPSF1Q10570 1443 aaKnown RBP14.89□□□□□ -0.03
USP11-206ENST00000469080 GNAI3P08754 354 aa14.89□□□□□ -0.03
USP11-206ENST00000469080 TATP17735 454 aaPredicted RBP14.89□□□□□ -0.03
USP11-206ENST00000469080 FOSBP53539 338 aa14.89□□□□□ -0.03
USP11-206ENST00000469080 KCNG1Q9UIX4 513 aa14.89□□□□□ -0.03
USP11-206ENST00000469080 SPG7Q9UQ90 795 aa14.89□□□□□ -0.03
USP11-206ENST00000469080 FER1L4A9Z1Z3 1794 aa14.88□□□□□ -0.03
USP11-206ENST00000469080 INTS3Q68E01 1043 aaKnown RBP14.88□□□□□ -0.03
USP11-206ENST00000469080 RPAP2Q8IXW5 612 aaPredicted RBP14.88□□□□□ -0.03
USP11-206ENST00000469080 IP6K1Q92551 441 aa14.88□□□□□ -0.03
USP11-206ENST00000469080 PLCB2Q00722 1185 aa14.88□□□□□ -0.03
USP11-206ENST00000469080 NEUROD6Q96NK8 337 aa14.88□□□□□ -0.03
USP11-206ENST00000469080 SBNO1A3KN83 1393 aa14.88□□□□□ -0.03
USP11-206ENST00000469080 ATP7BP35670 1465 aa14.88□□□□□ -0.03
USP11-206ENST00000469080 IFT172Q9UG01 1749 aa14.87□□□□□ -0.03
USP11-206ENST00000469080 KCNH5Q8NCM2 988 aa14.87□□□□□ -0.03
USP11-206ENST00000469080 MYD88Q99836 296 aa14.87□□□□□ -0.03
USP11-206ENST00000469080 RNF216Q9NWF9 866 aaPredicted RBP14.87□□□□□ -0.03
USP11-206ENST00000469080 C3P01024 1663 aa14.87□□□□□ -0.03
USP11-206ENST00000469080 IQSEC2Q5JU85 1478 aa14.87□□□□□ -0.03
USP11-206ENST00000469080 MYCNP04198 464 aaPredicted RBP14.87□□□□□ -0.03
USP11-206ENST00000469080 CABP4P57796 275 aa14.87□□□□□ -0.03
USP11-206ENST00000469080 SASS6Q6UVJ0 657 aa14.87□□□□□ -0.03
USP11-206ENST00000469080 DNAAF4Q8WXU2 420 aa14.87□□□□□ -0.03
USP11-206ENST00000469080 ANTXR1Q9H6X2 564 aa14.87□□□□□ -0.03
USP11-206ENST00000469080 ADAMTS2O95450 1211 aa14.87□□□□□ -0.03
USP11-206ENST00000469080 IFIT2P09913 472 aaKnown RBP14.87□□□□□ -0.03
USP11-206ENST00000469080 ATP2B3Q16720 1220 aa14.87□□□□□ -0.03
USP11-206ENST00000469080 MCTP1Q6DN14 999 aa14.87□□□□□ -0.03
USP11-206ENST00000469080 DNAJC2Q99543 621 aaKnown RBP14.87□□□□□ -0.03
USP11-206ENST00000469080 ZBTB3Q9H5J0 574 aa14.87□□□□□ -0.03
USP11-206ENST00000469080 KDM4FA0A1W2PPD8 638 aa14.86□□□□□ -0.03
USP11-206ENST00000469080 ARHGAP45Q92619 1136 aa14.86□□□□□ -0.03
USP11-206ENST00000469080 DCTPP1Q9H773 170 aa14.86□□□□□ -0.03
USP11-206ENST00000469080 CHMP5Q9NZZ3 219 aa14.86□□□□□ -0.03
USP11-206ENST00000469080 ISY1Q9ULR0 285 aaKnown RBP14.86□□□□□ -0.03
USP11-206ENST00000469080 KDM4AO75164 1064 aa14.86□□□□□ -0.03
USP11-206ENST00000469080 CPA1P15085 419 aa14.86□□□□□ -0.03
USP11-206ENST00000469080 SSFA2P28290 1259 aa14.86□□□□□ -0.03
USP11-206ENST00000469080 BMP2KLQ5H9B9 411 aa14.86□□□□□ -0.03
USP11-206ENST00000469080 TCEANC2Q96MN5 208 aa14.86□□□□□ -0.03
USP11-206ENST00000469080 MX1P20591 662 aa14.85□□□□□ -0.03
USP11-206ENST00000469080 PIP4K2BP78356 416 aa14.85□□□□□ -0.03
USP11-206ENST00000469080 TTC22Q5TAA0 569 aa14.85□□□□□ -0.03
USP11-206ENST00000469080 TRERF1Q96PN7 1200 aa14.85□□□□□ -0.03
USP11-206ENST00000469080 TRIM34Q9BYJ4 488 aa14.85□□□□□ -0.03
USP11-206ENST00000469080 ABCC4O15439 1325 aa14.85□□□□□ -0.03
USP11-206ENST00000469080 DDX11L8A8MPP1 907 aa14.85□□□□□ -0.03
USP11-206ENST00000469080 BOLA2Q9H3K6 86 aa14.85□□□□□ -0.03
USP11-206ENST00000469080 TULP1O00294 542 aaPredicted RBP14.85□□□□□ -0.03
USP11-206ENST00000469080 NEXNQ0ZGT2 675 aa14.85□□□□□ -0.03
USP11-206ENST00000469080 COPS6Q7L5N1 327 aa14.85□□□□□ -0.03
USP11-206ENST00000469080 MPNDQ8N594 471 aa14.85□□□□□ -0.03
USP11-206ENST00000469080 PDE1AP54750 535 aa14.84□□□□□ -0.03
USP11-206ENST00000469080 CSPP1Q1MSJ5 1256 aa14.84□□□□□ -0.03
USP11-206ENST00000469080 UNC5CLQ8IV45 518 aa14.84□□□□□ -0.03
USP11-206ENST00000469080 MAP3K5Q99683 1374 aa14.84□□□□□ -0.03
USP11-206ENST00000469080 G3BP1Q13283 466 aaKnown RBP eCLIP14.84□□□□□ -0.032e-6■■■□□ 15.2
USP11-206ENST00000469080 AACSQ86V21 672 aa14.84□□□□□ -0.03
USP11-206ENST00000469080 XAGE3Q8WTP9 111 aa14.83□□□□□ -0.03
USP11-206ENST00000469080 C19orf44Q9H6X5 657 aa14.83□□□□□ -0.03
USP11-206ENST00000469080 DIAPH3Q9NSV4 1193 aa14.83□□□□□ -0.03
USP11-206ENST00000469080 BCCIPQ9P287 314 aaKnown RBP eCLIP14.83□□□□□ -0.03
USP11-206ENST00000469080 DDX49Q9Y6V7 483 aaKnown RBP14.83□□□□□ -0.03
USP11-206ENST00000469080 USP44Q9H0E7 712 aa14.83□□□□□ -0.04
USP11-206ENST00000469080 SHPRHQ149N8 1683 aa14.83□□□□□ -0.04
USP11-206ENST00000469080 AATKQ6ZMQ8 1374 aa14.83□□□□□ -0.04
USP11-206ENST00000469080 UBE3BQ7Z3V4 1068 aa14.83□□□□□ -0.04
USP11-206ENST00000469080 ZGPATQ8N5A5 531 aaKnown RBP14.83□□□□□ -0.04
USP11-206ENST00000469080 GDPD2Q9HCC8 539 aa14.82□□□□□ -0.04
USP11-206ENST00000469080 USP16Q9Y5T5 823 aa14.82□□□□□ -0.04
USP11-206ENST00000469080 IGSF1Q8N6C5 1336 aa14.82□□□□□ -0.04
USP11-206ENST00000469080 GOLGA6L22H0YM25 854 aa14.82□□□□□ -0.04
USP11-206ENST00000469080 RNMTO43148 476 aaKnown RBP14.82□□□□□ -0.04
USP11-206ENST00000469080 ST18O60284 1047 aa14.82□□□□□ -0.04
USP11-206ENST00000469080 NEURL4Q96JN8 1562 aa14.82□□□□□ -0.04
USP11-206ENST00000469080 PTPRCP08575 1304 aa14.82□□□□□ -0.04
USP11-206ENST00000469080 CLASRPQ8N2M8 674 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms