RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 TRIM35Q9UPQ4 493 aa19.39■□□□□ 0.69
TMEM39A-205ENST00000468676 COL24A1Q17RW2 1714 aa19.38■□□□□ 0.69
TMEM39A-205ENST00000468676 RFC4P35249 363 aa19.37■□□□□ 0.69
TMEM39A-205ENST00000468676 CALD1Q05682 793 aaKnown RBP19.37■□□□□ 0.69
TMEM39A-205ENST00000468676 ARHGEF1Q92888 912 aaKnown RBP19.37■□□□□ 0.69
TMEM39A-205ENST00000468676 MIS18AQ9NYP9 233 aa19.37■□□□□ 0.69
TMEM39A-205ENST00000468676 KDM3BQ7LBC6 1761 aa19.37■□□□□ 0.69
TMEM39A-205ENST00000468676 TSPYL4Q9UJ04 414 aa19.36■□□□□ 0.69
TMEM39A-205ENST00000468676 NCBP3Q53F19 620 aaKnown RBP19.35■□□□□ 0.69
TMEM39A-205ENST00000468676 SMIM5Q71RC9 77 aa19.35■□□□□ 0.69
TMEM39A-205ENST00000468676 ARXQ96QS3 562 aa19.35■□□□□ 0.69
TMEM39A-205ENST00000468676 SOS1Q07889 1333 aaPredicted RBP19.34■□□□□ 0.69
TMEM39A-205ENST00000468676 EIF4A1P60842 406 aaKnown RBP19.34■□□□□ 0.69
TMEM39A-205ENST00000468676 NLGN1Q8N2Q7 840 aa19.34■□□□□ 0.69
TMEM39A-205ENST00000468676 ZBTB1Q9Y2K1 713 aa19.33■□□□□ 0.68
TMEM39A-205ENST00000468676 A0A087WZG4 1122 aa19.32■□□□□ 0.68
TMEM39A-205ENST00000468676 CCER2I3L3R5 266 aa19.32■□□□□ 0.68
TMEM39A-205ENST00000468676 CHL1O00533 1208 aa19.32■□□□□ 0.68
TMEM39A-205ENST00000468676 CANXP27824 592 aaKnown RBP19.32■□□□□ 0.68
TMEM39A-205ENST00000468676 CCDC27Q2M243 656 aa19.32■□□□□ 0.68
TMEM39A-205ENST00000468676 MSL1Q68DK7 614 aa19.32■□□□□ 0.68
TMEM39A-205ENST00000468676 NPM2Q86SE8 214 aaKnown RBP19.32■□□□□ 0.68
TMEM39A-205ENST00000468676 USP16Q9Y5T5 823 aa19.32■□□□□ 0.68
TMEM39A-205ENST00000468676 ZPR1O75312 459 aa19.31■□□□□ 0.68
TMEM39A-205ENST00000468676 GIGYF1O75420 1035 aaPredicted RBP19.31■□□□□ 0.68
TMEM39A-205ENST00000468676 IL6STP40189 918 aaPredicted RBP19.31■□□□□ 0.68
TMEM39A-205ENST00000468676 EIF5P55010 431 aaKnown RBP19.31■□□□□ 0.68
TMEM39A-205ENST00000468676 DIEXFQ68CQ4 756 aaKnown RBP19.31■□□□□ 0.68
TMEM39A-205ENST00000468676 FAM9BQ8IZU0 186 aa19.31■□□□□ 0.68
TMEM39A-205ENST00000468676 CFAP44Q96MT7 982 aa19.31■□□□□ 0.68
TMEM39A-205ENST00000468676 COL15A1P39059 1388 aa19.31■□□□□ 0.68
TMEM39A-205ENST00000468676 USP42Q9H9J4 1324 aaKnown RBP19.3■□□□□ 0.68
TMEM39A-205ENST00000468676 NGEFQ8N5V2 710 aa19.3■□□□□ 0.68
TMEM39A-205ENST00000468676 LAS1LQ9Y4W2 734 aaKnown RBP19.3■□□□□ 0.68
TMEM39A-205ENST00000468676 C4AP0C0L4 1744 aa19.3■□□□□ 0.68
TMEM39A-205ENST00000468676 A1BGP04217 495 aa19.29■□□□□ 0.68
TMEM39A-205ENST00000468676 GYS1P13807 737 aa19.29■□□□□ 0.68
TMEM39A-205ENST00000468676 IFT57Q9NWB7 429 aa19.29■□□□□ 0.68
TMEM39A-205ENST00000468676 NARFQ9UHQ1 456 aa19.29■□□□□ 0.68
TMEM39A-205ENST00000468676 PRAMEF22A3QJZ6 481 aa19.28■□□□□ 0.68
TMEM39A-205ENST00000468676 GNAI1P63096 354 aa19.28■□□□□ 0.68
TMEM39A-205ENST00000468676 LAMB4A4D0S4 1761 aa19.27■□□□□ 0.68
TMEM39A-205ENST00000468676 FHDC1Q9C0D6 1143 aaPredicted RBP19.27■□□□□ 0.68
TMEM39A-205ENST00000468676 MMP10P09238 476 aa19.26■□□□□ 0.67
TMEM39A-205ENST00000468676 ZNF853P0CG23 659 aa19.26■□□□□ 0.67
TMEM39A-205ENST00000468676 WWC1Q8IX03 1113 aa19.26■□□□□ 0.67
TMEM39A-205ENST00000468676 SRP68Q9UHB9 627 aaKnown RBP19.26■□□□□ 0.67
TMEM39A-205ENST00000468676 USPL1Q5W0Q7 1092 aa19.25■□□□□ 0.67
TMEM39A-205ENST00000468676 SYT17Q9BSW7 474 aa19.25■□□□□ 0.67
TMEM39A-205ENST00000468676 ZNF330Q9Y3S2 320 aaPredicted RBP19.25■□□□□ 0.67
TMEM39A-205ENST00000468676 ERBB4Q15303 1308 aa19.25■□□□□ 0.67
TMEM39A-205ENST00000468676 CD2APQ9Y5K6 639 aa19.24■□□□□ 0.67
TMEM39A-205ENST00000468676 IL16Q14005 1332 aa19.24■□□□□ 0.67
TMEM39A-205ENST00000468676 HOXB7P09629 217 aa19.23■□□□□ 0.67
TMEM39A-205ENST00000468676 FKBP8Q14318 412 aa19.23■□□□□ 0.67
TMEM39A-205ENST00000468676 MBIPQ9NS73 344 aa19.23■□□□□ 0.67
TMEM39A-205ENST00000468676 PARP3Q9Y6F1 533 aa19.23■□□□□ 0.67
TMEM39A-205ENST00000468676 NBPF26B4DH59 902 aa19.22■□□□□ 0.67
TMEM39A-205ENST00000468676 NBPF10Q6P3W6 841 aaKnown RBP19.22■□□□□ 0.67
TMEM39A-205ENST00000468676 DZIP3Q86Y13 1208 aaKnown RBP19.22■□□□□ 0.67
TMEM39A-205ENST00000468676 NBPF15Q8N660 670 aa19.22■□□□□ 0.67
TMEM39A-205ENST00000468676 TBC1D2BQ9UPU7 963 aa19.22■□□□□ 0.67
TMEM39A-205ENST00000468676 DCAF8L1A6NGE4 600 aa19.21■□□□□ 0.67
TMEM39A-205ENST00000468676 RGL2O15211 777 aa19.21■□□□□ 0.67
TMEM39A-205ENST00000468676 WDR63Q8IWG1 891 aa19.21■□□□□ 0.67
TMEM39A-205ENST00000468676 KLHL34Q8N239 644 aa19.21■□□□□ 0.67
TMEM39A-205ENST00000468676 CHMP4AQ9BY43 222 aa19.21■□□□□ 0.67
TMEM39A-205ENST00000468676 EIF2S2P20042 333 aaKnown RBP19.2■□□□□ 0.66
TMEM39A-205ENST00000468676 TM4SF1P30408 202 aa19.2■□□□□ 0.66
TMEM39A-205ENST00000468676 PIP4K2AP48426 406 aaPredicted RBP19.2■□□□□ 0.66
TMEM39A-205ENST00000468676 CAMTA2O94983 1202 aa19.19■□□□□ 0.66
TMEM39A-205ENST00000468676 CLEC4GQ6UXB4 293 aa19.19■□□□□ 0.66
TMEM39A-205ENST00000468676 BCL2L12Q9HB09 334 aa19.19■□□□□ 0.66
TMEM39A-205ENST00000468676 ZNF652Q9Y2D9 606 aa19.19■□□□□ 0.66
TMEM39A-205ENST00000468676 SCN7AQ01118 1682 aa19.17■□□□□ 0.66
TMEM39A-205ENST00000468676 NFIXQ14938 502 aa19.17■□□□□ 0.66
TMEM39A-205ENST00000468676 KRT24Q2M2I5 525 aa19.17■□□□□ 0.66
TMEM39A-205ENST00000468676 DUSP27Q5VZP5 1158 aa19.17■□□□□ 0.66
TMEM39A-205ENST00000468676 SALL2Q9Y467 1007 aaPredicted RBP19.17■□□□□ 0.66
TMEM39A-205ENST00000468676 SENP3-EIF4A1A0A087X0R7 540 aa19.16■□□□□ 0.66
TMEM39A-205ENST00000468676 POLRMTO00411 1230 aaKnown RBP19.16■□□□□ 0.66
TMEM39A-205ENST00000468676 MYL6BP14649 208 aa19.16■□□□□ 0.66
TMEM39A-205ENST00000468676 DDR1Q08345 913 aa19.16■□□□□ 0.66
TMEM39A-205ENST00000468676 HDGFL1Q5TGJ6 251 aa19.16■□□□□ 0.66
TMEM39A-205ENST00000468676 MIER1Q8N108 512 aa19.16■□□□□ 0.66
TMEM39A-205ENST00000468676 BCORQ6W2J9 1755 aa19.15■□□□□ 0.66
TMEM39A-205ENST00000468676 ERVV-1B6SEH8 477 aa19.15■□□□□ 0.66
TMEM39A-205ENST00000468676 PDIA6Q15084 440 aa19.15■□□□□ 0.66
TMEM39A-205ENST00000468676 KIF6Q6ZMV9 814 aa19.15■□□□□ 0.66
TMEM39A-205ENST00000468676 DDX21Q9NR30 783 aaKnown RBP eCLIP19.15■□□□□ 0.66
TMEM39A-205ENST00000468676 KIF13BQ9NQT8 1826 aa19.14■□□□□ 0.65
TMEM39A-205ENST00000468676 TBC1D9BQ66K14 1250 aa19.14■□□□□ 0.65
TMEM39A-205ENST00000468676 SETDB2Q96T68 719 aa19.14■□□□□ 0.65
TMEM39A-205ENST00000468676 DBF4Q9UBU7 674 aaPredicted RBP19.14■□□□□ 0.65
TMEM39A-205ENST00000468676 SERPINB2P05120 415 aa19.13■□□□□ 0.65
TMEM39A-205ENST00000468676 TGFB2P61812 414 aa19.13■□□□□ 0.65
TMEM39A-205ENST00000468676 NLGN2Q8NFZ4 835 aa19.13■□□□□ 0.65
TMEM39A-205ENST00000468676 NECTIN2Q92692 538 aa19.13■□□□□ 0.65
TMEM39A-205ENST00000468676 MAP3K15Q6ZN16 1313 aa19.13■□□□□ 0.65
TMEM39A-205ENST00000468676 CARMIL3Q8ND23 1372 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms