RNA–Protein interactions for RNA: ENST00000467997.6

PACRGL-204, Transcript of parkin coregulated like, humanhuman

TSL 5

Gene PACRGL, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-204ENST00000467997 RFC4P35249 363 aa29.27■■■□□ 2.28
PACRGL-204ENST00000467997 ARHGEF1Q92888 912 aaKnown RBP29.27■■■□□ 2.28
PACRGL-204ENST00000467997 MIS18AQ9NYP9 233 aa29.26■■■□□ 2.27
PACRGL-204ENST00000467997 ZBTB1Q9Y2K1 713 aa29.26■■■□□ 2.27
PACRGL-204ENST00000467997 SOS1Q07889 1333 aaPredicted RBP29.25■■■□□ 2.27
PACRGL-204ENST00000467997 SNRPA1P09661 255 aaKnown RBP29.25■■■□□ 2.27
PACRGL-204ENST00000467997 FHDC1Q9C0D6 1143 aaPredicted RBP29.23■■■□□ 2.27
PACRGL-204ENST00000467997 KDM3BQ7LBC6 1761 aa29.23■■■□□ 2.27
PACRGL-204ENST00000467997 C4AP0C0L4 1744 aa29.22■■■□□ 2.27
PACRGL-204ENST00000467997 BABAM1Q9NWV8 329 aa29.22■■■□□ 2.27
PACRGL-204ENST00000467997 APAF1O14727 1248 aa29.21■■■□□ 2.27
PACRGL-204ENST00000467997 TSPYL4Q9UJ04 414 aa29.21■■■□□ 2.27
PACRGL-204ENST00000467997 TRIM35Q9UPQ4 493 aa29.21■■■□□ 2.27
PACRGL-204ENST00000467997 COL15A1P39059 1388 aa29.21■■■□□ 2.27
PACRGL-204ENST00000467997 CANXP27824 592 aaKnown RBP29.2■■■□□ 2.26
PACRGL-204ENST00000467997 NLGN1Q8N2Q7 840 aa29.2■■■□□ 2.26
PACRGL-204ENST00000467997 USP42Q9H9J4 1324 aaKnown RBP29.2■■■□□ 2.26
PACRGL-204ENST00000467997 GYS1P13807 737 aa29.18■■■□□ 2.26
PACRGL-204ENST00000467997 ZPR1O75312 459 aa29.17■■■□□ 2.26
PACRGL-204ENST00000467997 EIF4A1P60842 406 aaKnown RBP29.17■■■□□ 2.26
PACRGL-204ENST00000467997 SYT17Q9BSW7 474 aa29.17■■■□□ 2.26
PACRGL-204ENST00000467997 USP16Q9Y5T5 823 aa29.17■■■□□ 2.26
PACRGL-204ENST00000467997 NPM2Q86SE8 214 aaKnown RBP29.16■■■□□ 2.26
PACRGL-204ENST00000467997 KLHL34Q8N239 644 aa29.16■■■□□ 2.26
PACRGL-204ENST00000467997 SRP68Q9UHB9 627 aaKnown RBP29.16■■■□□ 2.26
PACRGL-204ENST00000467997 A0A087WZG4 1122 aa29.15■■■□□ 2.26
PACRGL-204ENST00000467997 PRAMEF22A3QJZ6 481 aa29.15■■■□□ 2.26
PACRGL-204ENST00000467997 IL6STP40189 918 aaPredicted RBP29.15■■■□□ 2.26
PACRGL-204ENST00000467997 EIF5P55010 431 aaKnown RBP29.15■■■□□ 2.26
PACRGL-204ENST00000467997 A1BGP04217 495 aa29.14■■■□□ 2.26
PACRGL-204ENST00000467997 MMP10P09238 476 aa29.14■■■□□ 2.26
PACRGL-204ENST00000467997 GIGYF1O75420 1035 aaPredicted RBP29.13■■■□□ 2.25
PACRGL-204ENST00000467997 NARFQ9UHQ1 456 aa29.13■■■□□ 2.25
PACRGL-204ENST00000467997 CALD1Q05682 793 aaKnown RBP29.13■■■□□ 2.25
PACRGL-204ENST00000467997 ZNF330Q9Y3S2 320 aaPredicted RBP29.13■■■□□ 2.25
PACRGL-204ENST00000467997 LAMB4A4D0S4 1761 aa29.12■■■□□ 2.25
PACRGL-204ENST00000467997 USPL1Q5W0Q7 1092 aa29.11■■■□□ 2.25
PACRGL-204ENST00000467997 LAS1LQ9Y4W2 734 aaKnown RBP29.11■■■□□ 2.25
PACRGL-204ENST00000467997 CHL1O00533 1208 aa29.1■■■□□ 2.25
PACRGL-204ENST00000467997 FKBP8Q14318 412 aa29.09■■■□□ 2.25
PACRGL-204ENST00000467997 CD2APQ9Y5K6 639 aa29.09■■■□□ 2.25
PACRGL-204ENST00000467997 DCAF8L1A6NGE4 600 aa29.08■■■□□ 2.25
PACRGL-204ENST00000467997 CFAP44Q96MT7 982 aa29.08■■■□□ 2.25
PACRGL-204ENST00000467997 PARP3Q9Y6F1 533 aa29.08■■■□□ 2.25
PACRGL-204ENST00000467997 FAM9BQ8IZU0 186 aa29.06■■■□□ 2.24
PACRGL-204ENST00000467997 PIP4K2AP48426 406 aaPredicted RBP29.05■■■□□ 2.24
PACRGL-204ENST00000467997 CCDC27Q2M243 656 aa29.05■■■□□ 2.24
PACRGL-204ENST00000467997 NCBP3Q53F19 620 aaKnown RBP29.04■■■□□ 2.24
PACRGL-204ENST00000467997 IFT57Q9NWB7 429 aa29.04■■■□□ 2.24
PACRGL-204ENST00000467997 TBC1D2BQ9UPU7 963 aa29.04■■■□□ 2.24
PACRGL-204ENST00000467997 SCN7AQ01118 1682 aa29.04■■■□□ 2.24
PACRGL-204ENST00000467997 NBPF26B4DH59 902 aa29.03■■■□□ 2.24
PACRGL-204ENST00000467997 NBPF10Q6P3W6 841 aaKnown RBP29.03■■■□□ 2.24
PACRGL-204ENST00000467997 NBPF15Q8N660 670 aa29.03■■■□□ 2.24
PACRGL-204ENST00000467997 ERBB4Q15303 1308 aa29.03■■■□□ 2.24
PACRGL-204ENST00000467997 GNAI1P63096 354 aa29.02■■■□□ 2.24
PACRGL-204ENST00000467997 DZIP3Q86Y13 1208 aaKnown RBP29.02■■■□□ 2.24
PACRGL-204ENST00000467997 NLGN2Q8NFZ4 835 aa29.02■■■□□ 2.24
PACRGL-204ENST00000467997 BCL2L12Q9HB09 334 aa29.02■■■□□ 2.24
PACRGL-204ENST00000467997 ZNF853P0CG23 659 aa29.01■■■□□ 2.23
PACRGL-204ENST00000467997 TM4SF1P30408 202 aa29.01■■■□□ 2.23
PACRGL-204ENST00000467997 DDR1Q08345 913 aa29.01■■■□□ 2.23
PACRGL-204ENST00000467997 MBIPQ9NS73 344 aa29.01■■■□□ 2.23
PACRGL-204ENST00000467997 C10orf71Q711Q0 1435 aa29■■■□□ 2.23
PACRGL-204ENST00000467997 CAMTA2O94983 1202 aa29■■■□□ 2.23
PACRGL-204ENST00000467997 POLRMTO00411 1230 aaKnown RBP28.99■■■□□ 2.23
PACRGL-204ENST00000467997 NFIXQ14938 502 aa28.99■■■□□ 2.23
PACRGL-204ENST00000467997 WWC1Q8IX03 1113 aa28.98■■■□□ 2.23
PACRGL-204ENST00000467997 SENP3-EIF4A1A0A087X0R7 540 aa28.97■■■□□ 2.23
PACRGL-204ENST00000467997 CCER2I3L3R5 266 aa28.97■■■□□ 2.23
PACRGL-204ENST00000467997 HOXB7P09629 217 aa28.97■■■□□ 2.23
PACRGL-204ENST00000467997 EIF2S2P20042 333 aaKnown RBP28.97■■■□□ 2.23
PACRGL-204ENST00000467997 ZNF652Q9Y2D9 606 aa28.97■■■□□ 2.23
PACRGL-204ENST00000467997 BCORQ6W2J9 1755 aa28.96■■■□□ 2.23
PACRGL-204ENST00000467997 RGL2O15211 777 aa28.95■■■□□ 2.22
PACRGL-204ENST00000467997 KRT24Q2M2I5 525 aa28.95■■■□□ 2.22
PACRGL-204ENST00000467997 NGEFQ8N5V2 710 aa28.95■■■□□ 2.22
PACRGL-204ENST00000467997 MYL6BP14649 208 aa28.94■■■□□ 2.22
PACRGL-204ENST00000467997 CLEC4GQ6UXB4 293 aa28.94■■■□□ 2.22
PACRGL-204ENST00000467997 KIF13BQ9NQT8 1826 aa28.94■■■□□ 2.22
PACRGL-204ENST00000467997 TBC1D9BQ66K14 1250 aa28.93■■■□□ 2.22
PACRGL-204ENST00000467997 DIEXFQ68CQ4 756 aaKnown RBP28.93■■■□□ 2.22
PACRGL-204ENST00000467997 BICDL1Q6ZP65 573 aa28.93■■■□□ 2.22
PACRGL-204ENST00000467997 IL16Q14005 1332 aa28.93■■■□□ 2.22
PACRGL-204ENST00000467997 CARMIL3Q8ND23 1372 aa28.92■■■□□ 2.22
PACRGL-204ENST00000467997 GPR162Q16538 588 aa28.92■■■□□ 2.22
PACRGL-204ENST00000467997 GOLGB1Q14789 3259 aaKnown RBP28.92■■■□□ 2.22
PACRGL-204ENST00000467997 SERPINB2P05120 415 aa28.91■■■□□ 2.22
PACRGL-204ENST00000467997 TGFB2P61812 414 aa28.91■■■□□ 2.22
PACRGL-204ENST00000467997 KIF6Q6ZMV9 814 aa28.91■■■□□ 2.22
PACRGL-204ENST00000467997 HDGFL1Q5TGJ6 251 aa28.9■■■□□ 2.22
PACRGL-204ENST00000467997 DUSP27Q5VZP5 1158 aa28.9■■■□□ 2.22
PACRGL-204ENST00000467997 PELP1Q8IZL8 1130 aaKnown RBP28.9■■■□□ 2.22
PACRGL-204ENST00000467997 SETDB2Q96T68 719 aa28.9■■■□□ 2.22
PACRGL-204ENST00000467997 SALL2Q9Y467 1007 aaPredicted RBP28.9■■■□□ 2.22
PACRGL-204ENST00000467997 PXDNLA1KZ92 1463 aa28.9■■■□□ 2.22
PACRGL-204ENST00000467997 PDIA6Q15084 440 aa28.89■■■□□ 2.22
PACRGL-204ENST00000467997 NECTIN2Q92692 538 aa28.89■■■□□ 2.22
PACRGL-204ENST00000467997 ERVV-1B6SEH8 477 aa28.88■■■□□ 2.21
PACRGL-204ENST00000467997 WDR63Q8IWG1 891 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms