RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 LGR6Q9HBX8 967 aa21.82■■□□□ 1.08
SNAPC3-205ENST00000467062 PHF8Q9UPP1 1060 aa21.82■■□□□ 1.08
SNAPC3-205ENST00000467062 CCT4P50991 539 aaKnown RBP21.82■■□□□ 1.08
SNAPC3-205ENST00000467062 NBPF6Q5VWK0 638 aa21.82■■□□□ 1.08
SNAPC3-205ENST00000467062 ZNF771Q7L3S4 317 aaPredicted RBP21.82■■□□□ 1.08
SNAPC3-205ENST00000467062 PIBF1Q8WXW3 757 aa21.82■■□□□ 1.08
SNAPC3-205ENST00000467062 NBPF4Q96M43 638 aa21.82■■□□□ 1.08
SNAPC3-205ENST00000467062 ZNF830Q96NB3 372 aaPredicted RBP21.82■■□□□ 1.08
SNAPC3-205ENST00000467062 USP26Q9BXU7 913 aa21.82■■□□□ 1.08
SNAPC3-205ENST00000467062 GNAI2P04899 355 aa21.81■■□□□ 1.08
SNAPC3-205ENST00000467062 CCDC30Q5VVM6 783 aa21.81■■□□□ 1.08
SNAPC3-205ENST00000467062 JARID2Q92833 1246 aaPredicted RBP21.81■■□□□ 1.08
SNAPC3-205ENST00000467062 LRRC59Q96AG4 307 aaKnown RBP21.81■■□□□ 1.08
SNAPC3-205ENST00000467062 LMOD2Q6P5Q4 547 aa21.81■■□□□ 1.08
SNAPC3-205ENST00000467062 NALCNQ8IZF0 1738 aa21.8■■□□□ 1.08
SNAPC3-205ENST00000467062 VGLL3A8MV65 326 aa21.8■■□□□ 1.08
SNAPC3-205ENST00000467062 TAF7Q15545 349 aaPredicted RBP21.8■■□□□ 1.08
SNAPC3-205ENST00000467062 SPDYE4A6NLX3 237 aa21.8■■□□□ 1.08
SNAPC3-205ENST00000467062 ANXA1P04083 346 aa21.8■■□□□ 1.08
SNAPC3-205ENST00000467062 NOLC1Q14978 699 aaKnown RBP eCLIP21.8■■□□□ 1.08
SNAPC3-205ENST00000467062 FEZ1Q99689 392 aa21.8■■□□□ 1.08
SNAPC3-205ENST00000467062 PIK3C2AO00443 1686 aa21.8■■□□□ 1.08
SNAPC3-205ENST00000467062 KCNQ3O43525 872 aa21.79■■□□□ 1.08
SNAPC3-205ENST00000467062 PSME1Q06323 249 aa21.79■■□□□ 1.08
SNAPC3-205ENST00000467062 BCL2L12Q9HB09 334 aa21.79■■□□□ 1.08
SNAPC3-205ENST00000467062 HMMRO75330 724 aa21.79■■□□□ 1.08
SNAPC3-205ENST00000467062 LRRFIP2Q9Y608 721 aaKnown RBP21.79■■□□□ 1.08
SNAPC3-205ENST00000467062 PDE1AP54750 535 aa21.78■■□□□ 1.08
SNAPC3-205ENST00000467062 PRPF40AO75400 957 aaKnown RBP21.78■■□□□ 1.08
SNAPC3-205ENST00000467062 CYP2E1P05181 493 aaPredicted RBP21.78■■□□□ 1.08
SNAPC3-205ENST00000467062 HDGFL1Q5TGJ6 251 aa21.77■■□□□ 1.08
SNAPC3-205ENST00000467062 GPT2Q8TD30 523 aa21.77■■□□□ 1.08
SNAPC3-205ENST00000467062 RBM27Q9P2N5 1060 aaKnown RBP21.77■■□□□ 1.08
SNAPC3-205ENST00000467062 SYCE3A1L190 88 aa21.77■■□□□ 1.08
SNAPC3-205ENST00000467062 MAP3K5Q99683 1374 aa21.76■■□□□ 1.07
SNAPC3-205ENST00000467062 ORAI2Q96SN7 254 aa21.75■■□□□ 1.07
SNAPC3-205ENST00000467062 IL1RAPL2Q9NP60 686 aa21.75■■□□□ 1.07
SNAPC3-205ENST00000467062 SETD1BQ9UPS6 1966 aaKnown RBP21.75■■□□□ 1.07
SNAPC3-205ENST00000467062 GABPB1Q06547 395 aaPredicted RBP21.75■■□□□ 1.07
SNAPC3-205ENST00000467062 MPRIPQ6WCQ1 1025 aa21.75■■□□□ 1.07
SNAPC3-205ENST00000467062 USP44Q9H0E7 712 aa21.75■■□□□ 1.07
SNAPC3-205ENST00000467062 CWC22Q9HCG8 908 aaKnown RBP21.75■■□□□ 1.07
SNAPC3-205ENST00000467062 HTATSF1O43719 755 aaKnown RBP21.74■■□□□ 1.07
SNAPC3-205ENST00000467062 AK9Q5TCS8 1911 aa21.74■■□□□ 1.07
SNAPC3-205ENST00000467062 ANKLE2Q86XL3 938 aa21.74■■□□□ 1.07
SNAPC3-205ENST00000467062 RILPL2Q969X0 211 aa21.74■■□□□ 1.07
SNAPC3-205ENST00000467062 DIAPH3Q9NSV4 1193 aa21.74■■□□□ 1.07
SNAPC3-205ENST00000467062 OGFRQ9NZT2 677 aa21.74■■□□□ 1.07
SNAPC3-205ENST00000467062 TMEM63CQ9P1W3 806 aa21.74■■□□□ 1.07
SNAPC3-205ENST00000467062 PKP1Q13835 747 aa21.73■■□□□ 1.07
SNAPC3-205ENST00000467062 MBD3O95983 291 aa21.73■■□□□ 1.07
SNAPC3-205ENST00000467062 LRRCC1Q9C099 1032 aa21.73■■□□□ 1.07
SNAPC3-205ENST00000467062 CASC1Q6TDU7 716 aa21.72■■□□□ 1.07
SNAPC3-205ENST00000467062 RNF214Q8ND24 703 aa21.72■■□□□ 1.07
SNAPC3-205ENST00000467062 ANKRD7Q92527 254 aa21.72■■□□□ 1.07
SNAPC3-205ENST00000467062 TRIM6-TRIM34B2RNG4 842 aa21.72■■□□□ 1.07
SNAPC3-205ENST00000467062 U2AF2P26368 475 aaKnown RBP eCLIP21.72■■□□□ 1.07
SNAPC3-205ENST00000467062 IP6K1Q92551 441 aa21.72■■□□□ 1.07
SNAPC3-205ENST00000467062 TSPY26PQ9H489 355 aa21.72■■□□□ 1.07
SNAPC3-205ENST00000467062 SPTLC3Q9NUV7 552 aa21.72■■□□□ 1.07
SNAPC3-205ENST00000467062 CHAF1AQ13111 956 aaPredicted RBP21.71■■□□□ 1.07
SNAPC3-205ENST00000467062 CCDC66A2RUB6 948 aa21.71■■□□□ 1.07
SNAPC3-205ENST00000467062 IGSF3O75054 1194 aa21.71■■□□□ 1.07
SNAPC3-205ENST00000467062 MAP4K4O95819 1239 aaPredicted RBP21.71■■□□□ 1.07
SNAPC3-205ENST00000467062 GNAI3P08754 354 aa21.71■■□□□ 1.07
SNAPC3-205ENST00000467062 ATP8B2P98198 1209 aa21.71■■□□□ 1.07
SNAPC3-205ENST00000467062 SLC20A2Q08357 652 aa21.71■■□□□ 1.07
SNAPC3-205ENST00000467062 RABEP1Q15276 862 aa21.71■■□□□ 1.07
SNAPC3-205ENST00000467062 UNC5CLQ8IV45 518 aa21.71■■□□□ 1.07
SNAPC3-205ENST00000467062 PLCD3Q8N3E9 789 aa21.71■■□□□ 1.07
SNAPC3-205ENST00000467062 CHPF2Q9P2E5 772 aa21.71■■□□□ 1.07
SNAPC3-205ENST00000467062 NWD1Q149M9 1564 aa21.71■■□□□ 1.07
SNAPC3-205ENST00000467062 ZGPATQ8N5A5 531 aaKnown RBP21.7■■□□□ 1.06
SNAPC3-205ENST00000467062 UBTFL1P0CB47 393 aaPredicted RBP21.7■■□□□ 1.06
SNAPC3-205ENST00000467062 NUTM1Q86Y26 1132 aa21.7■■□□□ 1.06
SNAPC3-205ENST00000467062 FMN2Q9NZ56 1722 aa21.7■■□□□ 1.06
SNAPC3-205ENST00000467062 FAM177BA6PVY3 158 aa21.69■■□□□ 1.06
SNAPC3-205ENST00000467062 DNAJC2Q99543 621 aaKnown RBP21.69■■□□□ 1.06
SNAPC3-205ENST00000467062 ANKARQ7Z5J8 1434 aa21.69■■□□□ 1.06
SNAPC3-205ENST00000467062 NBPF7P0C2Y1 421 aaPredicted RBP21.69■■□□□ 1.06
SNAPC3-205ENST00000467062 MX1P20591 662 aa21.69■■□□□ 1.06
SNAPC3-205ENST00000467062 IRX5P78411 483 aaPredicted RBP21.69■■□□□ 1.06
SNAPC3-205ENST00000467062 CHAMP1Q96JM3 812 aa21.69■■□□□ 1.06
SNAPC3-205ENST00000467062 FER1L4A9Z1Z3 1794 aa21.69■■□□□ 1.06
SNAPC3-205ENST00000467062 ERC2O15083 957 aa21.68■■□□□ 1.06
SNAPC3-205ENST00000467062 ZBTB22O15209 634 aa21.68■■□□□ 1.06
SNAPC3-205ENST00000467062 NOL8Q76FK4 1167 aaKnown RBP21.68■■□□□ 1.06
SNAPC3-205ENST00000467062 PI4KAP2A4QPH2 592 aa21.68■■□□□ 1.06
SNAPC3-205ENST00000467062 EIF4A1P60842 406 aaKnown RBP21.68■■□□□ 1.06
SNAPC3-205ENST00000467062 PI4KAP1Q8N8J0 262 aa21.68■■□□□ 1.06
SNAPC3-205ENST00000467062 UVSSAQ2YD98 709 aa21.67■■□□□ 1.06
SNAPC3-205ENST00000467062 ZNF530Q6P9A1 599 aaPredicted RBP21.67■■□□□ 1.06
SNAPC3-205ENST00000467062 PRAMEF22A3QJZ6 481 aa21.67■■□□□ 1.06
SNAPC3-205ENST00000467062 KCNJ4P48050 445 aa21.67■■□□□ 1.06
SNAPC3-205ENST00000467062 PPP1R42Q7Z4L9 355 aa21.67■■□□□ 1.06
SNAPC3-205ENST00000467062 FOXD4L5Q5VV16 416 aaPredicted RBP21.66■■□□□ 1.06
SNAPC3-205ENST00000467062 FOXD4L4Q8WXT5 416 aaPredicted RBP21.66■■□□□ 1.06
SNAPC3-205ENST00000467062 SYAP1Q96A49 352 aaPredicted RBP21.66■■□□□ 1.06
SNAPC3-205ENST00000467062 OSBPL3Q9H4L5 887 aa21.66■■□□□ 1.06
SNAPC3-205ENST00000467062 SURF6O75683 361 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms