RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 MSH5O43196 834 aa30.48■■■□□ 2.47
SUMO3-205ENST00000466861 MIS18AQ9NYP9 233 aa30.48■■■□□ 2.47
SUMO3-205ENST00000466861 TSPYL4Q9UJ04 414 aa30.48■■■□□ 2.47
SUMO3-205ENST00000466861 CHL1O00533 1208 aa30.47■■■□□ 2.47
SUMO3-205ENST00000466861 PHF14O94880 888 aa30.47■■■□□ 2.47
SUMO3-205ENST00000466861 EIF4A1P60842 406 aaKnown RBP30.47■■■□□ 2.47
SUMO3-205ENST00000466861 FAM9BQ8IZU0 186 aa30.47■■■□□ 2.47
SUMO3-205ENST00000466861 SGIP1Q9BQI5 828 aa30.46■■■□□ 2.47
SUMO3-205ENST00000466861 PTGER2P43116 358 aa30.45■■■□□ 2.47
SUMO3-205ENST00000466861 CFAP44Q96MT7 982 aa30.45■■■□□ 2.47
SUMO3-205ENST00000466861 ATF5Q9Y2D1 282 aaPredicted RBP30.45■■■□□ 2.47
SUMO3-205ENST00000466861 SOS1Q07889 1333 aaPredicted RBP30.45■■■□□ 2.46
SUMO3-205ENST00000466861 ARHGEF1Q92888 912 aaKnown RBP30.44■■■□□ 2.46
SUMO3-205ENST00000466861 LAMB4A4D0S4 1761 aa30.43■■■□□ 2.46
SUMO3-205ENST00000466861 GIGYF1O75420 1035 aaPredicted RBP30.42■■■□□ 2.46
SUMO3-205ENST00000466861 RFC4P35249 363 aa30.42■■■□□ 2.46
SUMO3-205ENST00000466861 IFT57Q9NWB7 429 aa30.42■■■□□ 2.46
SUMO3-205ENST00000466861 ZBTB1Q9Y2K1 713 aa30.42■■■□□ 2.46
SUMO3-205ENST00000466861 C4AP0C0L4 1744 aa30.42■■■□□ 2.46
SUMO3-205ENST00000466861 POLD1P28340 1107 aa30.41■■■□□ 2.46
SUMO3-205ENST00000466861 USP16Q9Y5T5 823 aa30.41■■■□□ 2.46
SUMO3-205ENST00000466861 ZNF853P0CG23 659 aa30.4■■■□□ 2.46
SUMO3-205ENST00000466861 IL6STP40189 918 aaPredicted RBP30.4■■■□□ 2.46
SUMO3-205ENST00000466861 GNAI1P63096 354 aa30.4■■■□□ 2.46
SUMO3-205ENST00000466861 A0A087WZG4 1122 aa30.39■■■□□ 2.46
SUMO3-205ENST00000466861 EIF5P55010 431 aaKnown RBP30.39■■■□□ 2.46
SUMO3-205ENST00000466861 WWC1Q8IX03 1113 aa30.39■■■□□ 2.46
SUMO3-205ENST00000466861 SMIM5Q71RC9 77 aa30.38■■■□□ 2.45
SUMO3-205ENST00000466861 NLGN1Q8N2Q7 840 aa30.38■■■□□ 2.45
SUMO3-205ENST00000466861 PPP1R1BQ9UD71 204 aaPredicted RBP30.38■■■□□ 2.45
SUMO3-205ENST00000466861 COL15A1P39059 1388 aa30.38■■■□□ 2.45
SUMO3-205ENST00000466861 IL16Q14005 1332 aa30.37■■■□□ 2.45
SUMO3-205ENST00000466861 CANXP27824 592 aaKnown RBP30.36■■■□□ 2.45
SUMO3-205ENST00000466861 USP42Q9H9J4 1324 aaKnown RBP30.36■■■□□ 2.45
SUMO3-205ENST00000466861 PRAMEF22A3QJZ6 481 aa30.35■■■□□ 2.45
SUMO3-205ENST00000466861 A1BGP04217 495 aa30.35■■■□□ 2.45
SUMO3-205ENST00000466861 ARXQ96QS3 562 aa30.35■■■□□ 2.45
SUMO3-205ENST00000466861 LAS1LQ9Y4W2 734 aaKnown RBP30.35■■■□□ 2.45
SUMO3-205ENST00000466861 ERBB4Q15303 1308 aa30.35■■■□□ 2.45
SUMO3-205ENST00000466861 NPM2Q86SE8 214 aaKnown RBP30.34■■■□□ 2.45
SUMO3-205ENST00000466861 NARFQ9UHQ1 456 aa30.34■■■□□ 2.45
SUMO3-205ENST00000466861 ZPR1O75312 459 aa30.33■■■□□ 2.45
SUMO3-205ENST00000466861 HOXB7P09629 217 aa30.33■■■□□ 2.45
SUMO3-205ENST00000466861 GYS1P13807 737 aa30.33■■■□□ 2.45
SUMO3-205ENST00000466861 WDR63Q8IWG1 891 aa30.33■■■□□ 2.45
SUMO3-205ENST00000466861 MIER1Q8N108 512 aa30.32■■■□□ 2.44
SUMO3-205ENST00000466861 MBIPQ9NS73 344 aa30.32■■■□□ 2.44
SUMO3-205ENST00000466861 MSL1Q68DK7 614 aa30.31■■■□□ 2.44
SUMO3-205ENST00000466861 SRCAPQ6ZRS2 3230 aa30.3■■■□□ 2.44
SUMO3-205ENST00000466861 RGL2O15211 777 aa30.29■■■□□ 2.44
SUMO3-205ENST00000466861 NBPF26B4DH59 902 aa30.27■■■□□ 2.44
SUMO3-205ENST00000466861 NBPF10Q6P3W6 841 aaKnown RBP30.27■■■□□ 2.44
SUMO3-205ENST00000466861 NBPF15Q8N660 670 aa30.27■■■□□ 2.44
SUMO3-205ENST00000466861 CHMP4AQ9BY43 222 aa30.27■■■□□ 2.44
SUMO3-205ENST00000466861 SRP68Q9UHB9 627 aaKnown RBP30.26■■■□□ 2.43
SUMO3-205ENST00000466861 USPL1Q5W0Q7 1092 aa30.25■■■□□ 2.43
SUMO3-205ENST00000466861 SCN7AQ01118 1682 aa30.24■■■□□ 2.43
SUMO3-205ENST00000466861 MMP10P09238 476 aa30.23■■■□□ 2.43
SUMO3-205ENST00000466861 DZIP3Q86Y13 1208 aaKnown RBP30.23■■■□□ 2.43
SUMO3-205ENST00000466861 FKBP8Q14318 412 aa30.22■■■□□ 2.43
SUMO3-205ENST00000466861 ZNF330Q9Y3S2 320 aaPredicted RBP30.22■■■□□ 2.43
SUMO3-205ENST00000466861 BCORQ6W2J9 1755 aa30.21■■■□□ 2.43
SUMO3-205ENST00000466861 TM4SF1P30408 202 aa30.21■■■□□ 2.43
SUMO3-205ENST00000466861 DUSP27Q5VZP5 1158 aa30.21■■■□□ 2.43
SUMO3-205ENST00000466861 CLEC4GQ6UXB4 293 aa30.21■■■□□ 2.43
SUMO3-205ENST00000466861 FHDC1Q9C0D6 1143 aaPredicted RBP30.21■■■□□ 2.43
SUMO3-205ENST00000466861 ZNF521Q96K83 1311 aa30.21■■■□□ 2.43
SUMO3-205ENST00000466861 CAMTA2O94983 1202 aa30.2■■■□□ 2.43
SUMO3-205ENST00000466861 EIF2S2P20042 333 aaKnown RBP30.2■■■□□ 2.43
SUMO3-205ENST00000466861 KRT24Q2M2I5 525 aa30.2■■■□□ 2.43
SUMO3-205ENST00000466861 BCL2L12Q9HB09 334 aa30.2■■■□□ 2.43
SUMO3-205ENST00000466861 TBC1D2BQ9UPU7 963 aa30.2■■■□□ 2.43
SUMO3-205ENST00000466861 SALL2Q9Y467 1007 aaPredicted RBP30.2■■■□□ 2.43
SUMO3-205ENST00000466861 CD2APQ9Y5K6 639 aa30.2■■■□□ 2.43
SUMO3-205ENST00000466861 PIP4K2AP48426 406 aaPredicted RBP30.19■■■□□ 2.42
SUMO3-205ENST00000466861 SYT17Q9BSW7 474 aa30.19■■■□□ 2.42
SUMO3-205ENST00000466861 PARP3Q9Y6F1 533 aa30.19■■■□□ 2.42
SUMO3-205ENST00000466861 PDIA6Q15084 440 aa30.18■■■□□ 2.42
SUMO3-205ENST00000466861 DDX21Q9NR30 783 aaKnown RBP eCLIP30.18■■■□□ 2.42
SUMO3-205ENST00000466861 SENP3-EIF4A1A0A087X0R7 540 aa30.17■■■□□ 2.42
SUMO3-205ENST00000466861 HDGFL1Q5TGJ6 251 aa30.17■■■□□ 2.42
SUMO3-205ENST00000466861 ZNF652Q9Y2D9 606 aa30.17■■■□□ 2.42
SUMO3-205ENST00000466861 ERVV-1B6SEH8 477 aa30.16■■■□□ 2.42
SUMO3-205ENST00000466861 LRP10Q7Z4F1 713 aa30.16■■■□□ 2.42
SUMO3-205ENST00000466861 MYH16Q9H6N6 1097 aa30.16■■■□□ 2.42
SUMO3-205ENST00000466861 DBF4Q9UBU7 674 aaPredicted RBP30.15■■■□□ 2.42
SUMO3-205ENST00000466861 KIF13BQ9NQT8 1826 aa30.15■■■□□ 2.42
SUMO3-205ENST00000466861 MYL6BP14649 208 aa30.14■■■□□ 2.42
SUMO3-205ENST00000466861 NFIXQ14938 502 aa30.14■■■□□ 2.42
SUMO3-205ENST00000466861 POLRMTO00411 1230 aaKnown RBP30.13■■■□□ 2.41
SUMO3-205ENST00000466861 GOLGA2Q08379 1002 aa30.13■■■□□ 2.41
SUMO3-205ENST00000466861 C8orf58Q8NAV2 365 aa30.13■■■□□ 2.41
SUMO3-205ENST00000466861 TSR2Q969E8 191 aaKnown RBP30.13■■■□□ 2.41
SUMO3-205ENST00000466861 FANCIQ9NVI1 1328 aa30.13■■■□□ 2.41
SUMO3-205ENST00000466861 DDR1Q08345 913 aa30.12■■■□□ 2.41
SUMO3-205ENST00000466861 KIF6Q6ZMV9 814 aa30.12■■■□□ 2.41
SUMO3-205ENST00000466861 MAP3K15Q6ZN16 1313 aa30.12■■■□□ 2.41
SUMO3-205ENST00000466861 NRXN2Q9P2S2 1712 aa30.11■■■□□ 2.41
SUMO3-205ENST00000466861 CCDC30Q5VVM6 783 aa30.1■■■□□ 2.41
SUMO3-205ENST00000466861 HYPKQ9NX55 129 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms