RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 LAMB4A4D0S4 1761 aa26.52■■□□□ 1.84
PPP1R3F-203ENST00000466508 NWD2Q9ULI1 1742 aa26.52■■□□□ 1.84
PPP1R3F-203ENST00000466508 ANXA1P04083 346 aa26.51■■□□□ 1.83
PPP1R3F-203ENST00000466508 RPAP2Q8IXW5 612 aaPredicted RBP26.51■■□□□ 1.83
PPP1R3F-203ENST00000466508 ANKRD44Q8N8A2 993 aa26.51■■□□□ 1.83
PPP1R3F-203ENST00000466508 FMNL2Q96PY5 1086 aa26.51■■□□□ 1.83
PPP1R3F-203ENST00000466508 FAM161AQ3B820 660 aa26.51■■□□□ 1.83
PPP1R3F-203ENST00000466508 HYPKQ9NX55 129 aa26.51■■□□□ 1.83
PPP1R3F-203ENST00000466508 SNRPA1P09661 255 aaKnown RBP26.5■■□□□ 1.83
PPP1R3F-203ENST00000466508 NUCB1Q02818 461 aa26.5■■□□□ 1.83
PPP1R3F-203ENST00000466508 CEP85Q6P2H3 762 aa26.5■■□□□ 1.83
PPP1R3F-203ENST00000466508 DDX21Q9NR30 783 aaKnown RBP eCLIP26.5■■□□□ 1.83
PPP1R3F-203ENST00000466508 SOCS7O14512 581 aa26.49■■□□□ 1.83
PPP1R3F-203ENST00000466508 PROSER3Q2NL68 480 aa26.49■■□□□ 1.83
PPP1R3F-203ENST00000466508 PI4KAP2A4QPH2 592 aa26.48■■□□□ 1.83
PPP1R3F-203ENST00000466508 GNAI3P08754 354 aa26.48■■□□□ 1.83
PPP1R3F-203ENST00000466508 PI4KAP1Q8N8J0 262 aa26.48■■□□□ 1.83
PPP1R3F-203ENST00000466508 DNAAF4Q8WXU2 420 aa26.48■■□□□ 1.83
PPP1R3F-203ENST00000466508 ADCY9O60503 1353 aa26.48■■□□□ 1.83
PPP1R3F-203ENST00000466508 C8orf34Q49A92 452 aa26.47■■□□□ 1.83
PPP1R3F-203ENST00000466508 PDIA6Q15084 440 aa26.47■■□□□ 1.83
PPP1R3F-203ENST00000466508 GNAI2P04899 355 aa26.46■■□□□ 1.83
PPP1R3F-203ENST00000466508 CHD1LQ86WJ1 897 aa26.45■■□□□ 1.83
PPP1R3F-203ENST00000466508 SRCIN1Q9C0H9 1055 aa26.45■■□□□ 1.83
PPP1R3F-203ENST00000466508 KCPQ6ZWJ8 1503 aa26.45■■□□□ 1.82
PPP1R3F-203ENST00000466508 ITGB4P16144 1822 aa26.45■■□□□ 1.82
PPP1R3F-203ENST00000466508 FNBP4Q8N3X1 1017 aaPredicted RBP26.45■■□□□ 1.82
PPP1R3F-203ENST00000466508 USP21Q9UK80 565 aa26.45■■□□□ 1.82
PPP1R3F-203ENST00000466508 DCTPP1Q9H773 170 aa26.44■■□□□ 1.82
PPP1R3F-203ENST00000466508 SLIT2O94813 1529 aa26.44■■□□□ 1.82
PPP1R3F-203ENST00000466508 TNS2Q63HR2 1409 aa26.44■■□□□ 1.82
PPP1R3F-203ENST00000466508 BEND3Q5T5X7 828 aa26.43■■□□□ 1.82
PPP1R3F-203ENST00000466508 USP44Q9H0E7 712 aa26.43■■□□□ 1.82
PPP1R3F-203ENST00000466508 KSR2Q6VAB6 950 aa26.42■■□□□ 1.82
PPP1R3F-203ENST00000466508 QTRT2Q9H974 415 aaKnown RBP26.42■■□□□ 1.82
PPP1R3F-203ENST00000466508 USP16Q9Y5T5 823 aa26.42■■□□□ 1.82
PPP1R3F-203ENST00000466508 SPATA31A1Q5TZJ5 1347 aa26.42■■□□□ 1.82
PPP1R3F-203ENST00000466508 LNPKQ9C0E8 428 aa26.42■■□□□ 1.82
PPP1R3F-203ENST00000466508 THRAP3Q9Y2W1 955 aaKnown RBP26.42■■□□□ 1.82
PPP1R3F-203ENST00000466508 HMMRO75330 724 aa26.41■■□□□ 1.82
PPP1R3F-203ENST00000466508 DDX58O95786 925 aaKnown RBP26.41■■□□□ 1.82
PPP1R3F-203ENST00000466508 RXRBP28702 533 aa26.41■■□□□ 1.82
PPP1R3F-203ENST00000466508 ANKRD45Q5TZF3 282 aa26.41■■□□□ 1.82
PPP1R3F-203ENST00000466508 CDCA7Q9BWT1 371 aaPredicted RBP26.41■■□□□ 1.82
PPP1R3F-203ENST00000466508 TMOD3Q9NYL9 352 aa26.4■■□□□ 1.82
PPP1R3F-203ENST00000466508 MAP3K2Q9Y2U5 619 aa26.4■■□□□ 1.82
PPP1R3F-203ENST00000466508 EXOC5O00471 708 aa26.39■■□□□ 1.82
PPP1R3F-203ENST00000466508 UBTFL1P0CB47 393 aaPredicted RBP26.39■■□□□ 1.82
PPP1R3F-203ENST00000466508 KAT6BQ8WYB5 2073 aa26.37■■□□□ 1.81
PPP1R3F-203ENST00000466508 MYL6BP14649 208 aa26.37■■□□□ 1.81
PPP1R3F-203ENST00000466508 LRP10Q7Z4F1 713 aa26.37■■□□□ 1.81
PPP1R3F-203ENST00000466508 TRPC5Q9UL62 973 aaPredicted RBP26.37■■□□□ 1.81
PPP1R3F-203ENST00000466508 LRRFIP2Q9Y608 721 aaKnown RBP26.36■■□□□ 1.81
PPP1R3F-203ENST00000466508 ERBB4Q15303 1308 aa26.36■■□□□ 1.81
PPP1R3F-203ENST00000466508 SPATA31A5Q5VU36 1347 aa26.36■■□□□ 1.81
PPP1R3F-203ENST00000466508 SPATA31A7Q8IWB4 1347 aa26.36■■□□□ 1.81
PPP1R3F-203ENST00000466508 ALDH1L1O75891 902 aa26.36■■□□□ 1.81
PPP1R3F-203ENST00000466508 RBM6P78332 1123 aaKnown RBP26.36■■□□□ 1.81
PPP1R3F-203ENST00000466508 AIMP1Q12904 312 aaKnown RBP26.36■■□□□ 1.81
PPP1R3F-203ENST00000466508 BCL9LQ86UU0 1499 aa26.35■■□□□ 1.81
PPP1R3F-203ENST00000466508 XAGE3Q8WTP9 111 aa26.34■■□□□ 1.81
PPP1R3F-203ENST00000466508 PTCD1O75127 700 aaKnown RBP26.33■■□□□ 1.81
PPP1R3F-203ENST00000466508 ANP32AP39687 249 aaKnown RBP26.33■■□□□ 1.81
PPP1R3F-203ENST00000466508 ATP8B2P98198 1209 aa26.33■■□□□ 1.81
PPP1R3F-203ENST00000466508 COPS6Q7L5N1 327 aa26.33■■□□□ 1.81
PPP1R3F-203ENST00000466508 LINS1Q8NG48 757 aa26.33■■□□□ 1.81
PPP1R3F-203ENST00000466508 PIGBQ92521 554 aa26.33■■□□□ 1.81
PPP1R3F-203ENST00000466508 DOT1LQ8TEK3 1739 aa26.33■■□□□ 1.81
PPP1R3F-203ENST00000466508 NBPF7P0C2Y1 421 aaPredicted RBP26.32■■□□□ 1.8
PPP1R3F-203ENST00000466508 UNC5CLQ8IV45 518 aa26.32■■□□□ 1.8
PPP1R3F-203ENST00000466508 ARFGEF2Q9Y6D5 1785 aa26.32■■□□□ 1.8
PPP1R3F-203ENST00000466508 BCL9O00512 1426 aa26.32■■□□□ 1.8
PPP1R3F-203ENST00000466508 RIC3Q7Z5B4 369 aa26.32■■□□□ 1.8
PPP1R3F-203ENST00000466508 IBTKQ9P2D0 1353 aaPredicted RBP26.31■■□□□ 1.8
PPP1R3F-203ENST00000466508 PNMA6EA0A0J9YXQ4 647 aa26.3■■□□□ 1.8
PPP1R3F-203ENST00000466508 DDB1Q16531 1140 aa26.3■■□□□ 1.8
PPP1R3F-203ENST00000466508 BARGINQ6ZT62 677 aa26.3■■□□□ 1.8
PPP1R3F-203ENST00000466508 ZBTB47Q9UFB7 747 aaPredicted RBP26.3■■□□□ 1.8
PPP1R3F-203ENST00000466508 ATRNO75882 1429 aa26.3■■□□□ 1.8
PPP1R3F-203ENST00000466508 PIP4K2AP48426 406 aaPredicted RBP26.3■■□□□ 1.8
PPP1R3F-203ENST00000466508 CWF19L2Q2TBE0 894 aaKnown RBP26.29■■□□□ 1.8
PPP1R3F-203ENST00000466508 ASAP1Q9ULH1 1129 aa26.29■■□□□ 1.8
PPP1R3F-203ENST00000466508 ANKRD13DQ6ZTN6 518 aa26.28■■□□□ 1.8
PPP1R3F-203ENST00000466508 CCDC9Q9Y3X0 531 aaKnown RBP26.28■■□□□ 1.8
PPP1R3F-203ENST00000466508 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.28■■□□□ 1.8
PPP1R3F-203ENST00000466508 NBPF26B4DH59 902 aa26.28■■□□□ 1.8
PPP1R3F-203ENST00000466508 NEXNQ0ZGT2 675 aa26.28■■□□□ 1.8
PPP1R3F-203ENST00000466508 NBPF14Q5TI25 921 aa26.28■■□□□ 1.8
PPP1R3F-203ENST00000466508 NBPF10Q6P3W6 841 aaKnown RBP26.28■■□□□ 1.8
PPP1R3F-203ENST00000466508 VSIG10Q8N0Z9 540 aa26.28■■□□□ 1.8
PPP1R3F-203ENST00000466508 NBPF15Q8N660 670 aa26.28■■□□□ 1.8
PPP1R3F-203ENST00000466508 ATG3Q9NT62 314 aa26.28■■□□□ 1.8
PPP1R3F-203ENST00000466508 C9orf78Q9NZ63 289 aaPredicted RBP26.28■■□□□ 1.8
PPP1R3F-203ENST00000466508 AFDNP55196 1824 aaKnown RBP26.27■■□□□ 1.8
PPP1R3F-203ENST00000466508 METTL22Q9BUU2 404 aaPredicted RBP26.27■■□□□ 1.8
PPP1R3F-203ENST00000466508 NPM2Q86SE8 214 aaKnown RBP26.26■■□□□ 1.79
PPP1R3F-203ENST00000466508 SSH3Q8TE77 659 aa26.26■■□□□ 1.79
PPP1R3F-203ENST00000466508 HDAC5Q9UQL6 1122 aa26.26■■□□□ 1.79
PPP1R3F-203ENST00000466508 IGKV5-2P06315 115 aa26.25■■□□□ 1.79
PPP1R3F-203ENST00000466508 UTYO14607 1347 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms