RNA–Protein interactions for RNA: ENST00000466243.1

SLC6A8-207, Transcript of solute carrier family 6 member 8, humanhuman

TSL 2

Gene SLC6A8, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-207ENST00000466243 USPL1Q5W0Q7 1092 aa18.05■□□□□ 0.48
SLC6A8-207ENST00000466243 COL15A1P39059 1388 aa18.04■□□□□ 0.48
SLC6A8-207ENST00000466243 COL5A3P25940 1745 aaPredicted RBP18.04■□□□□ 0.48
SLC6A8-207ENST00000466243 TJP1Q07157 1748 aa18.04■□□□□ 0.48
SLC6A8-207ENST00000466243 ZNF330Q9Y3S2 320 aaPredicted RBP18.04■□□□□ 0.48
SLC6A8-207ENST00000466243 THUMPD2Q9BTF0 503 aaKnown RBP18.03■□□□□ 0.48
SLC6A8-207ENST00000466243 MIS18AQ9NYP9 233 aa18.03■□□□□ 0.48
SLC6A8-207ENST00000466243 NARFQ9UHQ1 456 aa18.03■□□□□ 0.48
SLC6A8-207ENST00000466243 CICQ96RK0 1608 aaPredicted RBP18.02■□□□□ 0.48
SLC6A8-207ENST00000466243 A0A087WZG4 1122 aa18.02■□□□□ 0.48
SLC6A8-207ENST00000466243 A1BGP04217 495 aa18.02■□□□□ 0.48
SLC6A8-207ENST00000466243 SNRPA1P09661 255 aaKnown RBP18.02■□□□□ 0.48
SLC6A8-207ENST00000466243 YBX3P16989 372 aaKnown RBP eCLIP18.02■□□□□ 0.481e-10■□□□□ 11
SLC6A8-207ENST00000466243 NPM2Q86SE8 214 aaKnown RBP18.02■□□□□ 0.48
SLC6A8-207ENST00000466243 PNISRQ8TF01 805 aaKnown RBP18.02■□□□□ 0.48
SLC6A8-207ENST00000466243 UTRNP46939 3433 aa18.01■□□□□ 0.47
SLC6A8-207ENST00000466243 ZNF316A6NFI3 1004 aaPredicted RBP18.01■□□□□ 0.47
SLC6A8-207ENST00000466243 GRIN3BO60391 1043 aa18.01■□□□□ 0.47
SLC6A8-207ENST00000466243 EIF5P55010 431 aaKnown RBP18.01■□□□□ 0.47
SLC6A8-207ENST00000466243 RIPK4P57078 832 aa18.01■□□□□ 0.47
SLC6A8-207ENST00000466243 CCDC146Q8IYE0 955 aa18.01■□□□□ 0.47
SLC6A8-207ENST00000466243 WWC3Q9ULE0 1092 aa18.01■□□□□ 0.47
SLC6A8-207ENST00000466243 USP16Q9Y5T5 823 aa18.01■□□□□ 0.47
SLC6A8-207ENST00000466243 PRAMEF22A3QJZ6 481 aa18■□□□□ 0.47
SLC6A8-207ENST00000466243 IL6STP40189 918 aaPredicted RBP18■□□□□ 0.47
SLC6A8-207ENST00000466243 DDR1Q08345 913 aa18■□□□□ 0.47
SLC6A8-207ENST00000466243 TMPOP42166 694 aaKnown RBP17.99■□□□□ 0.47
SLC6A8-207ENST00000466243 MYH14Q7Z406 1995 aaKnown RBP17.99■□□□□ 0.47
SLC6A8-207ENST00000466243 POLRMTO00411 1230 aaKnown RBP17.98■□□□□ 0.47
SLC6A8-207ENST00000466243 TM4SF1P30408 202 aa17.98■□□□□ 0.47
SLC6A8-207ENST00000466243 TGFB2P61812 414 aa17.98■□□□□ 0.47
SLC6A8-207ENST00000466243 LMOD3Q0VAK6 560 aa17.98■□□□□ 0.47
SLC6A8-207ENST00000466243 NFIXQ14938 502 aa17.98■□□□□ 0.47
SLC6A8-207ENST00000466243 BCL2L12Q9HB09 334 aa17.98■□□□□ 0.47
SLC6A8-207ENST00000466243 ADAMTS8Q9UP79 889 aa17.98■□□□□ 0.47
SLC6A8-207ENST00000466243 RRP7AQ9Y3A4 280 aaKnown RBP17.98■□□□□ 0.47
SLC6A8-207ENST00000466243 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
SLC6A8-207ENST00000466243 PIP4K2AP48426 406 aaPredicted RBP17.97■□□□□ 0.47
SLC6A8-207ENST00000466243 NEUROD2Q15784 382 aa17.97■□□□□ 0.47
SLC6A8-207ENST00000466243 RUNDC1Q96C34 613 aa17.97■□□□□ 0.47
SLC6A8-207ENST00000466243 TBC1D2BQ9UPU7 963 aa17.97■□□□□ 0.47
SLC6A8-207ENST00000466243 UBR2Q8IWV8 1755 aa17.96■□□□□ 0.47
SLC6A8-207ENST00000466243 A0A0G2JLW4 131 aa17.96■□□□□ 0.47
SLC6A8-207ENST00000466243 DPEP1P16444 411 aa17.95■□□□□ 0.46
SLC6A8-207ENST00000466243 EIF4A1P60842 406 aaKnown RBP17.95■□□□□ 0.46
SLC6A8-207ENST00000466243 BICDL1Q6ZP65 573 aa17.95■□□□□ 0.46
SLC6A8-207ENST00000466243 TSPYL4Q9UJ04 414 aa17.95■□□□□ 0.46
SLC6A8-207ENST00000466243 PXDNLA1KZ92 1463 aa17.95■□□□□ 0.46
SLC6A8-207ENST00000466243 DZIP3Q86Y13 1208 aaKnown RBP17.94■□□□□ 0.46
SLC6A8-207ENST00000466243 SIPA1L3O60292 1781 aaPredicted RBP17.94■□□□□ 0.46
SLC6A8-207ENST00000466243 C4AP0C0L4 1744 aa17.93■□□□□ 0.46
SLC6A8-207ENST00000466243 GIGYF1O75420 1035 aaPredicted RBP17.93■□□□□ 0.46
SLC6A8-207ENST00000466243 SERPINB2P05120 415 aa17.93■□□□□ 0.46
SLC6A8-207ENST00000466243 GOLGB1Q14789 3259 aaKnown RBP17.92■□□□□ 0.46
SLC6A8-207ENST00000466243 CAMTA2O94983 1202 aa17.92■□□□□ 0.46
SLC6A8-207ENST00000466243 TBC1D9BQ66K14 1250 aa17.92■□□□□ 0.46
SLC6A8-207ENST00000466243 BCS1LQ9Y276 419 aa17.92■□□□□ 0.46
SLC6A8-207ENST00000466243 NBPF26B4DH59 902 aa17.91■□□□□ 0.46
SLC6A8-207ENST00000466243 NBPF10Q6P3W6 841 aaKnown RBP17.91■□□□□ 0.46
SLC6A8-207ENST00000466243 NBPF15Q8N660 670 aa17.91■□□□□ 0.46
SLC6A8-207ENST00000466243 ZNF784Q8NCA9 323 aaPredicted RBP17.91■□□□□ 0.46
SLC6A8-207ENST00000466243 ANP32CO43423 234 aa17.9■□□□□ 0.46
SLC6A8-207ENST00000466243 BABAM1Q9NWV8 329 aa17.9■□□□□ 0.46
SLC6A8-207ENST00000466243 VIRMAQ69YN4 1812 aaKnown RBP17.9■□□□□ 0.46
SLC6A8-207ENST00000466243 CHRNA5P30532 468 aa17.89■□□□□ 0.45
SLC6A8-207ENST00000466243 SETDB2Q96T68 719 aa17.89■□□□□ 0.45
SLC6A8-207ENST00000466243 PIM2Q9P1W9 311 aa17.89■□□□□ 0.45
SLC6A8-207ENST00000466243 TRIM35Q9UPQ4 493 aa17.89■□□□□ 0.45
SLC6A8-207ENST00000466243 ZNF652Q9Y2D9 606 aa17.89■□□□□ 0.45
SLC6A8-207ENST00000466243 LAS1LQ9Y4W2 734 aaKnown RBP17.89■□□□□ 0.45
SLC6A8-207ENST00000466243 KCNA3P22001 575 aa17.88■□□□□ 0.45
SLC6A8-207ENST00000466243 NGEFQ8N5V2 710 aa17.88■□□□□ 0.45
SLC6A8-207ENST00000466243 CARMIL3Q8ND23 1372 aa17.88■□□□□ 0.45
SLC6A8-207ENST00000466243 APAF1O14727 1248 aa17.87■□□□□ 0.45
SLC6A8-207ENST00000466243 NPHP1O15259 732 aa17.87■□□□□ 0.45
SLC6A8-207ENST00000466243 CCDC184Q52MB2 194 aa17.87■□□□□ 0.45
SLC6A8-207ENST00000466243 DALRD3Q5D0E6 543 aaKnown RBP17.86■□□□□ 0.45
SLC6A8-207ENST00000466243 CLEC4GQ6UXB4 293 aa17.86■□□□□ 0.45
SLC6A8-207ENST00000466243 CHL1O00533 1208 aa17.85■□□□□ 0.45
SLC6A8-207ENST00000466243 MYL6BP14649 208 aa17.85■□□□□ 0.45
SLC6A8-207ENST00000466243 EIF2S2P20042 333 aaKnown RBP17.85■□□□□ 0.45
SLC6A8-207ENST00000466243 PRR5LQ6MZQ0 368 aa17.84■□□□□ 0.45
SLC6A8-207ENST00000466243 KIF6Q6ZMV9 814 aa17.84■□□□□ 0.45
SLC6A8-207ENST00000466243 ARHGAP27Q6ZUM4 889 aa17.84■□□□□ 0.45
SLC6A8-207ENST00000466243 C2CD5Q86YS7 1000 aa17.84■□□□□ 0.45
SLC6A8-207ENST00000466243 CCDC24Q8N4L8 307 aa17.84■□□□□ 0.45
SLC6A8-207ENST00000466243 CNBD1Q8NA66 436 aa17.84■□□□□ 0.45
SLC6A8-207ENST00000466243 ERBB4Q15303 1308 aa17.83■□□□□ 0.44
SLC6A8-207ENST00000466243 H0YIN7 160 aa17.83■□□□□ 0.44
SLC6A8-207ENST00000466243 RGL2O15211 777 aa17.83■□□□□ 0.44
SLC6A8-207ENST00000466243 ST5P78524 1137 aa17.83■□□□□ 0.44
SLC6A8-207ENST00000466243 NBPF5PQ86XG9 351 aaPredicted RBP17.83■□□□□ 0.44
SLC6A8-207ENST00000466243 MRS2Q9HD23 443 aa17.83■□□□□ 0.44
SLC6A8-207ENST00000466243 NIP7Q9Y221 180 aaKnown RBP eCLIP17.83■□□□□ 0.44
SLC6A8-207ENST00000466243 HLFQ16534 295 aa17.82■□□□□ 0.44
SLC6A8-207ENST00000466243 BRIP1Q9BX63 1249 aa17.82■□□□□ 0.44
SLC6A8-207ENST00000466243 PDE6BP35913 854 aa17.81■□□□□ 0.44
SLC6A8-207ENST00000466243 KRT24Q2M2I5 525 aa17.81■□□□□ 0.44
SLC6A8-207ENST00000466243 TTLL7Q6ZT98 887 aa17.81■□□□□ 0.44
SLC6A8-207ENST00000466243 NECTIN2Q92692 538 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms