RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 NRXN2Q9P2S2 1712 aa19.19■□□□□ 0.66
ATG4B-214ENST00000465399 SIPA1L3O60292 1781 aaPredicted RBP19.19■□□□□ 0.66
ATG4B-214ENST00000465399 COL15A1P39059 1388 aa19.19■□□□□ 0.66
ATG4B-214ENST00000465399 COL3A1P02461 1466 aaPredicted RBP19.17■□□□□ 0.66
ATG4B-214ENST00000465399 TM4SF1P30408 202 aa19.17■□□□□ 0.66
ATG4B-214ENST00000465399 VSIG10Q8N0Z9 540 aa19.17■□□□□ 0.66
ATG4B-214ENST00000465399 NPC1L1Q9UHC9 1359 aa19.17■□□□□ 0.66
ATG4B-214ENST00000465399 TTC5Q8N0Z6 440 aa19.16■□□□□ 0.66
ATG4B-214ENST00000465399 NARFQ9UHQ1 456 aa19.16■□□□□ 0.66
ATG4B-214ENST00000465399 ZBTB1Q9Y2K1 713 aa19.16■□□□□ 0.66
ATG4B-214ENST00000465399 TOMM70O94826 608 aa19.15■□□□□ 0.66
ATG4B-214ENST00000465399 CHRNA5P30532 468 aa19.15■□□□□ 0.66
ATG4B-214ENST00000465399 CNGB1Q14028 1251 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-214ENST00000465399 C9orf131Q5VYM1 1079 aa19.15■□□□□ 0.66
ATG4B-214ENST00000465399 TNRC6CQ9HCJ0 1690 aaKnown RBP19.14■□□□□ 0.66
ATG4B-214ENST00000465399 U2SURPO15042 1029 aaKnown RBP19.14■□□□□ 0.65
ATG4B-214ENST00000465399 NFIXQ14938 502 aa19.13■□□□□ 0.65
ATG4B-214ENST00000465399 NMRK2Q9NPI5 230 aa19.13■□□□□ 0.65
ATG4B-214ENST00000465399 SCN7AQ01118 1682 aa19.13■□□□□ 0.65
ATG4B-214ENST00000465399 CCDC88AQ3V6T2 1871 aa19.13■□□□□ 0.65
ATG4B-214ENST00000465399 STARD3NLO95772 234 aa19.12■□□□□ 0.65
ATG4B-214ENST00000465399 CANXP27824 592 aaKnown RBP19.12■□□□□ 0.65
ATG4B-214ENST00000465399 TEFQ10587 303 aa19.12■□□□□ 0.65
ATG4B-214ENST00000465399 GAS2L2Q8NHY3 880 aa19.12■□□□□ 0.65
ATG4B-214ENST00000465399 RNF181Q9P0P0 153 aa19.12■□□□□ 0.65
ATG4B-214ENST00000465399 KDM2BQ8NHM5 1336 aa19.11■□□□□ 0.65
ATG4B-214ENST00000465399 GNAT3A8MTJ3 354 aa19.11■□□□□ 0.65
ATG4B-214ENST00000465399 APLP1P51693 650 aa19.11■□□□□ 0.65
ATG4B-214ENST00000465399 C16orf71Q8IYS4 520 aaPredicted RBP19.11■□□□□ 0.65
ATG4B-214ENST00000465399 WDR90Q96KV7 1748 aa19.11■□□□□ 0.65
ATG4B-214ENST00000465399 SERPINB2P05120 415 aa19.1■□□□□ 0.65
ATG4B-214ENST00000465399 A0A087WZG4 1122 aa19.09■□□□□ 0.65
ATG4B-214ENST00000465399 TEX13AQ9BXU3 409 aaPredicted RBP19.09■□□□□ 0.65
ATG4B-214ENST00000465399 BCL2L12Q9HB09 334 aa19.09■□□□□ 0.65
ATG4B-214ENST00000465399 ANKRD31Q8N7Z5 1873 aa19.09■□□□□ 0.65
ATG4B-214ENST00000465399 TIAM2Q8IVF5 1701 aa19.08■□□□□ 0.65
ATG4B-214ENST00000465399 HEG1Q9ULI3 1381 aa19.08■□□□□ 0.65
ATG4B-214ENST00000465399 EIF5P55010 431 aaKnown RBP19.08■□□□□ 0.64
ATG4B-214ENST00000465399 ZNF790Q6PG37 636 aa19.08■□□□□ 0.64
ATG4B-214ENST00000465399 IL17REQ8NFR9 667 aa19.08■□□□□ 0.64
ATG4B-214ENST00000465399 ZNF496Q96IT1 587 aaPredicted RBP19.08■□□□□ 0.64
ATG4B-214ENST00000465399 RBM46Q8TBY0 533 aaKnown RBP19.07■□□□□ 0.64
ATG4B-214ENST00000465399 CFAP53Q96M91 514 aa19.07■□□□□ 0.64
ATG4B-214ENST00000465399 BCORQ6W2J9 1755 aa19.06■□□□□ 0.64
ATG4B-214ENST00000465399 CACNA1SQ13698 1873 aa19.06■□□□□ 0.64
ATG4B-214ENST00000465399 IFFO2Q5TF58 517 aa19.06■□□□□ 0.64
ATG4B-214ENST00000465399 BICDL1Q6ZP65 573 aa19.06■□□□□ 0.64
ATG4B-214ENST00000465399 FMNL2Q96PY5 1086 aa19.06■□□□□ 0.64
ATG4B-214ENST00000465399 ZNF330Q9Y3S2 320 aaPredicted RBP19.06■□□□□ 0.64
ATG4B-214ENST00000465399 ZC3H4Q9UPT8 1303 aaKnown RBP19.05■□□□□ 0.64
ATG4B-214ENST00000465399 H0YIN7 160 aa19.05■□□□□ 0.64
ATG4B-214ENST00000465399 NPM2Q86SE8 214 aaKnown RBP19.05■□□□□ 0.64
ATG4B-214ENST00000465399 C2CD5Q86YS7 1000 aa19.05■□□□□ 0.64
ATG4B-214ENST00000465399 TTLL6Q8N841 843 aa19.05■□□□□ 0.64
ATG4B-214ENST00000465399 COL11A2P13942 1736 aaPredicted RBP19.05■□□□□ 0.64
ATG4B-214ENST00000465399 CARMIL3Q8ND23 1372 aa19.05■□□□□ 0.64
ATG4B-214ENST00000465399 PRKAR2BP31323 418 aa19.04■□□□□ 0.64
ATG4B-214ENST00000465399 RASSF7Q02833 373 aa19.04■□□□□ 0.64
ATG4B-214ENST00000465399 CEMIPQ8WUJ3 1361 aa19.04■□□□□ 0.64
ATG4B-214ENST00000465399 LMNB1P20700 586 aa19.03■□□□□ 0.64
ATG4B-214ENST00000465399 IL6STP40189 918 aaPredicted RBP19.03■□□□□ 0.64
ATG4B-214ENST00000465399 DICER1Q9UPY3 1922 aaKnown RBP19.03■□□□□ 0.64
ATG4B-214ENST00000465399 BTBD11A6QL63 1104 aa19.02■□□□□ 0.64
ATG4B-214ENST00000465399 FSTL1Q12841 308 aa19.02■□□□□ 0.64
ATG4B-214ENST00000465399 TBC1D9BQ66K14 1250 aa19.02■□□□□ 0.64
ATG4B-214ENST00000465399 RSPH6AQ9H0K4 717 aa19.02■□□□□ 0.64
ATG4B-214ENST00000465399 RRAGCQ9HB90 399 aa19.02■□□□□ 0.64
ATG4B-214ENST00000465399 TBC1D2BQ9UPU7 963 aa19.02■□□□□ 0.64
ATG4B-214ENST00000465399 NUDCQ9Y266 331 aa19.02■□□□□ 0.64
ATG4B-214ENST00000465399 FER1L6Q2WGJ9 1857 aa19.02■□□□□ 0.64
ATG4B-214ENST00000465399 PHACTR3Q96KR7 559 aa19.01■□□□□ 0.63
ATG4B-214ENST00000465399 PDZRN3Q9UPQ7 1066 aa19.01■□□□□ 0.63
ATG4B-214ENST00000465399 ARFGEF2Q9Y6D5 1785 aa19.01■□□□□ 0.63
ATG4B-214ENST00000465399 PDE6BP35913 854 aa19■□□□□ 0.63
ATG4B-214ENST00000465399 BRIP1Q9BX63 1249 aa19■□□□□ 0.63
ATG4B-214ENST00000465399 NPHP1O15259 732 aa18.99■□□□□ 0.63
ATG4B-214ENST00000465399 RTF1Q92541 710 aaKnown RBP18.99■□□□□ 0.63
ATG4B-214ENST00000465399 ZNF622Q969S3 477 aaKnown RBP eCLIP18.99■□□□□ 0.631e-6■■□□□ 12.8
ATG4B-214ENST00000465399 A1BGP04217 495 aa18.98■□□□□ 0.63
ATG4B-214ENST00000465399 U2AF1L5P0DN76 240 aaPredicted RBP18.98■□□□□ 0.63
ATG4B-214ENST00000465399 U2AF1Q01081 240 aaKnown RBP eCLIP18.98■□□□□ 0.63
ATG4B-214ENST00000465399 PRR5LQ6MZQ0 368 aa18.98■□□□□ 0.63
ATG4B-214ENST00000465399 DNAJC5GQ8N7S2 189 aa18.98■□□□□ 0.63
ATG4B-214ENST00000465399 SETDB2Q96T68 719 aa18.98■□□□□ 0.63
ATG4B-214ENST00000465399 GLTPD2A6NH11 291 aa18.97■□□□□ 0.63
ATG4B-214ENST00000465399 CNBD1Q8NA66 436 aa18.97■□□□□ 0.63
ATG4B-214ENST00000465399 SMC1BQ8NDV3 1235 aa18.97■□□□□ 0.63
ATG4B-214ENST00000465399 DLG5Q8TDM6 1919 aa18.96■□□□□ 0.63
ATG4B-214ENST00000465399 NFKBIEO00221 500 aa18.96■□□□□ 0.63
ATG4B-214ENST00000465399 KCNQ3O43525 872 aa18.96■□□□□ 0.63
ATG4B-214ENST00000465399 CAMTA2O94983 1202 aa18.96■□□□□ 0.63
ATG4B-214ENST00000465399 PPP2R1AP30153 589 aa18.96■□□□□ 0.63
ATG4B-214ENST00000465399 PRELPP51888 382 aa18.96■□□□□ 0.63
ATG4B-214ENST00000465399 ST5P78524 1137 aa18.96■□□□□ 0.63
ATG4B-214ENST00000465399 DZIP3Q86Y13 1208 aaKnown RBP18.96■□□□□ 0.63
ATG4B-214ENST00000465399 LAMB4A4D0S4 1761 aa18.96■□□□□ 0.63
ATG4B-214ENST00000465399 SLX4Q8IY92 1834 aa18.95■□□□□ 0.62
ATG4B-214ENST00000465399 CCDC24Q8N4L8 307 aa18.95■□□□□ 0.62
ATG4B-214ENST00000465399 SNRPA1P09661 255 aaKnown RBP18.94■□□□□ 0.62
ATG4B-214ENST00000465399 VEGFAP15692 232 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms