RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 CANXP27824 592 aaKnown RBP15.48■□□□□ 0.07
APTX-213ENST00000465003 ZNF853P0CG23 659 aa15.47■□□□□ 0.07
APTX-213ENST00000465003 INTS5Q6P9B9 1019 aaKnown RBP15.47■□□□□ 0.07
APTX-213ENST00000465003 IFT57Q9NWB7 429 aa15.47■□□□□ 0.07
APTX-213ENST00000465003 CICQ96RK0 1608 aaPredicted RBP15.47■□□□□ 0.07
APTX-213ENST00000465003 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.47■□□□□ 0.07
APTX-213ENST00000465003 GIGYF1O75420 1035 aaPredicted RBP15.47■□□□□ 0.07
APTX-213ENST00000465003 ZBTB7AO95365 584 aa15.47■□□□□ 0.07
APTX-213ENST00000465003 SNRPA1P09661 255 aaKnown RBP15.47■□□□□ 0.07
APTX-213ENST00000465003 EIF2S2P20042 333 aaKnown RBP15.47■□□□□ 0.07
APTX-213ENST00000465003 CDCA7LQ96GN5 454 aa15.47■□□□□ 0.07
APTX-213ENST00000465003 ZNF521Q96K83 1311 aa15.46■□□□□ 0.07
APTX-213ENST00000465003 GNAI1P63096 354 aa15.46■□□□□ 0.07
APTX-213ENST00000465003 COL23A1Q86Y22 540 aaPredicted RBP15.46■□□□□ 0.07
APTX-213ENST00000465003 VSIG10Q8N0Z9 540 aa15.46■□□□□ 0.07
APTX-213ENST00000465003 FANCIQ9NVI1 1328 aa15.46■□□□□ 0.06
APTX-213ENST00000465003 ANXA1P04083 346 aa15.45■□□□□ 0.06
APTX-213ENST00000465003 MSL1Q68DK7 614 aa15.45■□□□□ 0.06
APTX-213ENST00000465003 TSPYL6Q8N831 410 aa15.45■□□□□ 0.06
APTX-213ENST00000465003 CCDC87Q9NVE4 849 aa15.45■□□□□ 0.06
APTX-213ENST00000465003 LAMB4A4D0S4 1761 aa15.45■□□□□ 0.06
APTX-213ENST00000465003 CASZ1Q86V15 1759 aa15.45■□□□□ 0.06
APTX-213ENST00000465003 CNTNAP4Q9C0A0 1308 aa15.45■□□□□ 0.06
APTX-213ENST00000465003 C8orf58Q8NAV2 365 aa15.45■□□□□ 0.06
APTX-213ENST00000465003 CALD1Q05682 793 aaKnown RBP15.44■□□□□ 0.06
APTX-213ENST00000465003 NGEFQ8N5V2 710 aa15.44■□□□□ 0.06
APTX-213ENST00000465003 C4AP0C0L4 1744 aa15.44■□□□□ 0.06
APTX-213ENST00000465003 TCERG1O14776 1098 aaKnown RBP15.44■□□□□ 0.06
APTX-213ENST00000465003 STARD3NLO95772 234 aa15.44■□□□□ 0.06
APTX-213ENST00000465003 YTHDC1Q96MU7 727 aaKnown RBP15.44■□□□□ 0.06
APTX-213ENST00000465003 ARXQ96QS3 562 aa15.44■□□□□ 0.06
APTX-213ENST00000465003 ATF5Q9Y2D1 282 aaPredicted RBP15.44■□□□□ 0.06
APTX-213ENST00000465003 RTCBQ9Y3I0 505 aaKnown RBP15.44■□□□□ 0.06
APTX-213ENST00000465003 NBPF26B4DH59 902 aa15.43■□□□□ 0.06
APTX-213ENST00000465003 MYL6BP14649 208 aa15.43■□□□□ 0.06
APTX-213ENST00000465003 NBPF10Q6P3W6 841 aaKnown RBP15.43■□□□□ 0.06
APTX-213ENST00000465003 WDR63Q8IWG1 891 aa15.43■□□□□ 0.06
APTX-213ENST00000465003 NBPF15Q8N660 670 aa15.43■□□□□ 0.06
APTX-213ENST00000465003 SRP68Q9UHB9 627 aaKnown RBP15.43■□□□□ 0.06
APTX-213ENST00000465003 UTRNP46939 3433 aa15.43■□□□□ 0.06
APTX-213ENST00000465003 PROSER3Q2NL68 480 aa15.42■□□□□ 0.06
APTX-213ENST00000465003 DUSP27Q5VZP5 1158 aa15.42■□□□□ 0.06
APTX-213ENST00000465003 ARHGEF1Q92888 912 aaKnown RBP15.42■□□□□ 0.06
APTX-213ENST00000465003 BABAM1Q9NWV8 329 aa15.42■□□□□ 0.06
APTX-213ENST00000465003 QSER1Q2KHR3 1735 aa15.41■□□□□ 0.06
APTX-213ENST00000465003 SOS1Q07889 1333 aaPredicted RBP15.41■□□□□ 0.06
APTX-213ENST00000465003 RPS6KA4O75676 772 aa15.41■□□□□ 0.06
APTX-213ENST00000465003 RC3H1Q5TC82 1133 aaKnown RBP15.41■□□□□ 0.06
APTX-213ENST00000465003 COL15A1P39059 1388 aa15.41■□□□□ 0.06
APTX-213ENST00000465003 EXOSC9Q06265 439 aaKnown RBP15.4■□□□□ 0.06
APTX-213ENST00000465003 GOLGA2Q08379 1002 aa15.4■□□□□ 0.06
APTX-213ENST00000465003 TBC1D2BQ9UPU7 963 aa15.4■□□□□ 0.06
APTX-213ENST00000465003 SSFA2P28290 1259 aa15.4■□□□□ 0.06
APTX-213ENST00000465003 TRAPPC3LQ5T215 181 aa15.4■□□□□ 0.06
APTX-213ENST00000465003 HDGFL1Q5TGJ6 251 aa15.4■□□□□ 0.06
APTX-213ENST00000465003 TEX13AQ9BXU3 409 aaPredicted RBP15.4■□□□□ 0.06
APTX-213ENST00000465003 IL16Q14005 1332 aa15.39■□□□□ 0.05
APTX-213ENST00000465003 NCBP3Q53F19 620 aaKnown RBP15.39■□□□□ 0.05
APTX-213ENST00000465003 CHPF2Q9P2E5 772 aa15.39■□□□□ 0.05
APTX-213ENST00000465003 RFC4P35249 363 aa15.38■□□□□ 0.05
APTX-213ENST00000465003 EIF5P55010 431 aaKnown RBP15.38■□□□□ 0.05
APTX-213ENST00000465003 PDIA6Q15084 440 aa15.38■□□□□ 0.05
APTX-213ENST00000465003 TWISTNBQ3B726 338 aaPredicted RBP15.37■□□□□ 0.05
APTX-213ENST00000465003 USPL1Q5W0Q7 1092 aa15.37■□□□□ 0.05
APTX-213ENST00000465003 SLFN5Q08AF3 891 aa15.36■□□□□ 0.05
APTX-213ENST00000465003 AIMP1Q12904 312 aaKnown RBP15.36■□□□□ 0.05
APTX-213ENST00000465003 ZNF428Q96B54 188 aa15.36■□□□□ 0.05
APTX-213ENST00000465003 MYH16Q9H6N6 1097 aa15.36■□□□□ 0.05
APTX-213ENST00000465003 TTLL7Q6ZT98 887 aa15.36■□□□□ 0.05
APTX-213ENST00000465003 USP42Q9H9J4 1324 aaKnown RBP15.36■□□□□ 0.05
APTX-213ENST00000465003 E9PSI1 815 aa15.35■□□□□ 0.05
APTX-213ENST00000465003 GYS1P13807 737 aa15.35■□□□□ 0.05
APTX-213ENST00000465003 IL6STP40189 918 aaPredicted RBP15.35■□□□□ 0.05
APTX-213ENST00000465003 FKBP8Q14318 412 aa15.35■□□□□ 0.05
APTX-213ENST00000465003 DZIP3Q86Y13 1208 aaKnown RBP15.35■□□□□ 0.05
APTX-213ENST00000465003 MTFR1LQ9H019 292 aa15.35■□□□□ 0.05
APTX-213ENST00000465003 ZPR1O75312 459 aa15.34■□□□□ 0.05
APTX-213ENST00000465003 BICDL1Q6ZP65 573 aa15.34■□□□□ 0.05
APTX-213ENST00000465003 LRP10Q7Z4F1 713 aa15.34■□□□□ 0.05
APTX-213ENST00000465003 NPM2Q86SE8 214 aaKnown RBP15.34■□□□□ 0.05
APTX-213ENST00000465003 FLAD1Q8NFF5 587 aa15.34■□□□□ 0.05
APTX-213ENST00000465003 ZBTB3Q9H5J0 574 aa15.34■□□□□ 0.05
APTX-213ENST00000465003 PHAXQ9H814 394 aaKnown RBP15.34■□□□□ 0.05
APTX-213ENST00000465003 BCL2L12Q9HB09 334 aa15.34■□□□□ 0.05
APTX-213ENST00000465003 ADRA2BP18089 450 aa15.33■□□□□ 0.05
APTX-213ENST00000465003 PTGER2P43116 358 aa15.33■□□□□ 0.05
APTX-213ENST00000465003 SCN7AQ01118 1682 aa15.33■□□□□ 0.04
APTX-213ENST00000465003 VAMP4O75379 141 aa15.33■□□□□ 0.04
APTX-213ENST00000465003 HLFQ16534 295 aa15.33■□□□□ 0.04
APTX-213ENST00000465003 XAGE3Q8WTP9 111 aa15.33■□□□□ 0.04
APTX-213ENST00000465003 BCL2L13Q9BXK5 485 aa15.33■□□□□ 0.04
APTX-213ENST00000465003 ZBED9Q6R2W3 1325 aa15.33■□□□□ 0.04
APTX-213ENST00000465003 CAMTA2O94983 1202 aa15.32■□□□□ 0.04
APTX-213ENST00000465003 HOXB7P09629 217 aa15.32■□□□□ 0.04
APTX-213ENST00000465003 COPS6Q7L5N1 327 aa15.32■□□□□ 0.04
APTX-213ENST00000465003 KLHL34Q8N239 644 aa15.32■□□□□ 0.04
APTX-213ENST00000465003 SPON1Q9HCB6 807 aa15.32■□□□□ 0.04
APTX-213ENST00000465003 NARFQ9UHQ1 456 aa15.32■□□□□ 0.04
APTX-213ENST00000465003 BCORQ6W2J9 1755 aa15.32■□□□□ 0.04
APTX-213ENST00000465003 DDX21Q9NR30 783 aaKnown RBP eCLIP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms