RNA–Protein interactions for RNA: ENST00000462391.5

NPM3-202, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 3

Gene NPM3, Length 481 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-202ENST00000462391 KIF13BQ9NQT8 1826 aa28.18■■■□□ 2.1
NPM3-202ENST00000462391 ZPR1O75312 459 aa28.18■■■□□ 2.1
NPM3-202ENST00000462391 SRP68Q9UHB9 627 aaKnown RBP28.18■■■□□ 2.1
NPM3-202ENST00000462391 PARP3Q9Y6F1 533 aa28.18■■■□□ 2.1
NPM3-202ENST00000462391 COL15A1P39059 1388 aa28.18■■■□□ 2.1
NPM3-202ENST00000462391 MAPK8IP3Q9UPT6 1336 aa28.18■■■□□ 2.1
NPM3-202ENST00000462391 C10orf71Q711Q0 1435 aa28.16■■■□□ 2.1
NPM3-202ENST00000462391 DLG5Q8TDM6 1919 aa28.16■■■□□ 2.1
NPM3-202ENST00000462391 YBX3P16989 372 aaKnown RBP eCLIP28.15■■■□□ 2.1
NPM3-202ENST00000462391 FKBP8Q14318 412 aa28.15■■■□□ 2.1
NPM3-202ENST00000462391 NFE2L2Q16236 605 aa28.15■■■□□ 2.1
NPM3-202ENST00000462391 NARFQ9UHQ1 456 aa28.15■■■□□ 2.1
NPM3-202ENST00000462391 DCTN1Q14203 1278 aa28.14■■■□□ 2.1
NPM3-202ENST00000462391 A0A087WZG4 1122 aa28.13■■■□□ 2.09
NPM3-202ENST00000462391 KCNQ3O43525 872 aa28.13■■■□□ 2.09
NPM3-202ENST00000462391 CANXP27824 592 aaKnown RBP28.13■■■□□ 2.09
NPM3-202ENST00000462391 TGFB2P61812 414 aa28.13■■■□□ 2.09
NPM3-202ENST00000462391 TAF7Q15545 349 aaPredicted RBP28.13■■■□□ 2.09
NPM3-202ENST00000462391 EIF5P55010 431 aaKnown RBP28.12■■■□□ 2.09
NPM3-202ENST00000462391 USPL1Q5W0Q7 1092 aa28.12■■■□□ 2.09
NPM3-202ENST00000462391 IL6STP40189 918 aaPredicted RBP28.1■■■□□ 2.09
NPM3-202ENST00000462391 PNISRQ8TF01 805 aaKnown RBP28.1■■■□□ 2.09
NPM3-202ENST00000462391 PXDNLA1KZ92 1463 aa28.09■■■□□ 2.09
NPM3-202ENST00000462391 SNRPA1P09661 255 aaKnown RBP28.09■■■□□ 2.09
NPM3-202ENST00000462391 TM4SF1P30408 202 aa28.09■■■□□ 2.09
NPM3-202ENST00000462391 DDR1Q08345 913 aa28.09■■■□□ 2.09
NPM3-202ENST00000462391 PRKRIP1Q9H875 184 aaPredicted RBP28.08■■■□□ 2.09
NPM3-202ENST00000462391 KIAA1551Q9HCM1 1747 aa28.08■■■□□ 2.09
NPM3-202ENST00000462391 POLRMTO00411 1230 aaKnown RBP28.06■■■□□ 2.08
NPM3-202ENST00000462391 NPM2Q86SE8 214 aaKnown RBP28.06■■■□□ 2.08
NPM3-202ENST00000462391 A1BGP04217 495 aa28.04■■■□□ 2.08
NPM3-202ENST00000462391 NFIXQ14938 502 aa28.04■■■□□ 2.08
NPM3-202ENST00000462391 BCL2L12Q9HB09 334 aa28.04■■■□□ 2.08
NPM3-202ENST00000462391 KDM3BQ7LBC6 1761 aa28.04■■■□□ 2.08
NPM3-202ENST00000462391 WDR43Q15061 677 aaKnown RBP eCLIP28.03■■■□□ 2.08
NPM3-202ENST00000462391 USP16Q9Y5T5 823 aa28.03■■■□□ 2.08
NPM3-202ENST00000462391 N4BP2Q86UW6 1770 aaPredicted RBP28.03■■■□□ 2.08
NPM3-202ENST00000462391 SCN7AQ01118 1682 aa28.03■■■□□ 2.08
NPM3-202ENST00000462391 LMOD3Q0VAK6 560 aa28.02■■■□□ 2.08
NPM3-202ENST00000462391 ZNF784Q8NCA9 323 aaPredicted RBP28.02■■■□□ 2.08
NPM3-202ENST00000462391 ZNF330Q9Y3S2 320 aaPredicted RBP28.02■■■□□ 2.08
NPM3-202ENST00000462391 A0A0G2JLW4 131 aa28.01■■■□□ 2.07
NPM3-202ENST00000462391 DPEP1P16444 411 aa28■■■□□ 2.07
NPM3-202ENST00000462391 RIPK4P57078 832 aa28■■■□□ 2.07
NPM3-202ENST00000462391 MIS18AQ9NYP9 233 aa28■■■□□ 2.07
NPM3-202ENST00000462391 NRXN2Q9P2S2 1712 aa28■■■□□ 2.07
NPM3-202ENST00000462391 PRAMEF22A3QJZ6 481 aa27.99■■■□□ 2.07
NPM3-202ENST00000462391 TMPOP42166 694 aaKnown RBP27.99■■■□□ 2.07
NPM3-202ENST00000462391 THUMPD2Q9BTF0 503 aaKnown RBP27.99■■■□□ 2.07
NPM3-202ENST00000462391 LAMB4A4D0S4 1761 aa27.99■■■□□ 2.07
NPM3-202ENST00000462391 BRCA1P38398 1863 aaKnown RBP27.98■■■□□ 2.07
NPM3-202ENST00000462391 AFDNP55196 1824 aaKnown RBP27.98■■■□□ 2.07
NPM3-202ENST00000462391 WWC3Q9ULE0 1092 aa27.98■■■□□ 2.07
NPM3-202ENST00000462391 TBC1D2BQ9UPU7 963 aa27.98■■■□□ 2.07
NPM3-202ENST00000462391 SERPINB2P05120 415 aa27.97■■■□□ 2.07
NPM3-202ENST00000462391 RUNDC1Q96C34 613 aa27.97■■■□□ 2.07
NPM3-202ENST00000462391 DZIP3Q86Y13 1208 aaKnown RBP27.96■■■□□ 2.07
NPM3-202ENST00000462391 BABAM1Q9NWV8 329 aa27.96■■■□□ 2.07
NPM3-202ENST00000462391 CAMTA2O94983 1202 aa27.95■■■□□ 2.06
NPM3-202ENST00000462391 EIF4A1P60842 406 aaKnown RBP27.95■■■□□ 2.06
NPM3-202ENST00000462391 PIM2Q9P1W9 311 aa27.95■■■□□ 2.06
NPM3-202ENST00000462391 BCS1LQ9Y276 419 aa27.95■■■□□ 2.06
NPM3-202ENST00000462391 BCORQ6W2J9 1755 aa27.95■■■□□ 2.06
NPM3-202ENST00000462391 GIGYF1O75420 1035 aaPredicted RBP27.94■■■□□ 2.06
NPM3-202ENST00000462391 KCNA3P22001 575 aa27.94■■■□□ 2.06
NPM3-202ENST00000462391 ADAMTS8Q9UP79 889 aa27.94■■■□□ 2.06
NPM3-202ENST00000462391 RGL2O15211 777 aa27.93■■■□□ 2.06
NPM3-202ENST00000462391 TBC1D9BQ66K14 1250 aa27.93■■■□□ 2.06
NPM3-202ENST00000462391 CCDC146Q8IYE0 955 aa27.93■■■□□ 2.06
NPM3-202ENST00000462391 CARMIL3Q8ND23 1372 aa27.92■■■□□ 2.06
NPM3-202ENST00000462391 NBPF26B4DH59 902 aa27.92■■■□□ 2.06
NPM3-202ENST00000462391 NBPF10Q6P3W6 841 aaKnown RBP27.92■■■□□ 2.06
NPM3-202ENST00000462391 BICDL1Q6ZP65 573 aa27.92■■■□□ 2.06
NPM3-202ENST00000462391 NBPF15Q8N660 670 aa27.92■■■□□ 2.06
NPM3-202ENST00000462391 ARFGEF1Q9Y6D6 1849 aa27.91■■■□□ 2.06
NPM3-202ENST00000462391 PIP4K2AP48426 406 aaPredicted RBP27.91■■■□□ 2.06
NPM3-202ENST00000462391 CLEC4GQ6UXB4 293 aa27.91■■■□□ 2.06
NPM3-202ENST00000462391 TSPYL4Q9UJ04 414 aa27.91■■■□□ 2.06
NPM3-202ENST00000462391 ZNF652Q9Y2D9 606 aa27.91■■■□□ 2.06
NPM3-202ENST00000462391 ZNF316A6NFI3 1004 aaPredicted RBP27.9■■■□□ 2.06
NPM3-202ENST00000462391 DALRD3Q5D0E6 543 aaKnown RBP27.9■■■□□ 2.06
NPM3-202ENST00000462391 SETDB2Q96T68 719 aa27.89■■■□□ 2.06
NPM3-202ENST00000462391 RRP7AQ9Y3A4 280 aaKnown RBP27.89■■■□□ 2.06
NPM3-202ENST00000462391 CHRNA5P30532 468 aa27.88■■■□□ 2.05
NPM3-202ENST00000462391 NEUROD2Q15784 382 aa27.87■■■□□ 2.05
NPM3-202ENST00000462391 PDZRN3Q9UPQ7 1066 aa27.87■■■□□ 2.05
NPM3-202ENST00000462391 ADCY9O60503 1353 aa27.86■■■□□ 2.05
NPM3-202ENST00000462391 ERBB4Q15303 1308 aa27.86■■■□□ 2.05
NPM3-202ENST00000462391 DLEC1Q9Y238 1755 aa27.86■■■□□ 2.05
NPM3-202ENST00000462391 ARHGAP27Q6ZUM4 889 aa27.84■■■□□ 2.05
NPM3-202ENST00000462391 BRIP1Q9BX63 1249 aa27.84■■■□□ 2.05
NPM3-202ENST00000462391 TRIM35Q9UPQ4 493 aa27.84■■■□□ 2.05
NPM3-202ENST00000462391 ATP10DQ9P241 1426 aa27.84■■■□□ 2.05
NPM3-202ENST00000462391 H0YIN7 160 aa27.83■■■□□ 2.05
NPM3-202ENST00000462391 PRR5LQ6MZQ0 368 aa27.83■■■□□ 2.05
NPM3-202ENST00000462391 CNBD1Q8NA66 436 aa27.83■■■□□ 2.05
NPM3-202ENST00000462391 NPHP1O15259 732 aa27.82■■■□□ 2.04
NPM3-202ENST00000462391 PDE6BP35913 854 aa27.82■■■□□ 2.04
NPM3-202ENST00000462391 C2CD5Q86YS7 1000 aa27.82■■■□□ 2.04
NPM3-202ENST00000462391 ANKRD31Q8N7Z5 1873 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms