RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 PRAG1Q86YV5 1406 aa8.69□□□□□ -1.02
CDKN3-205ENST00000458126 INO80Q9ULG1 1556 aaPredicted RBP8.69□□□□□ -1.02
CDKN3-205ENST00000458126 AMHR2Q16671 573 aa8.68□□□□□ -1.02
CDKN3-205ENST00000458126 NUTM1Q86Y26 1132 aa8.68□□□□□ -1.02
CDKN3-205ENST00000458126 NMRK2Q9NPI5 230 aa8.68□□□□□ -1.02
CDKN3-205ENST00000458126 PKD2L1Q9P0L9 805 aa8.68□□□□□ -1.02
CDKN3-205ENST00000458126 RPRD2Q5VT52 1461 aaKnown RBP8.68□□□□□ -1.02
CDKN3-205ENST00000458126 ZBTB24O43167 697 aaPredicted RBP8.67□□□□□ -1.02
CDKN3-205ENST00000458126 SSTR3P32745 418 aaPredicted RBP8.67□□□□□ -1.02
CDKN3-205ENST00000458126 CDC42BPBQ9Y5S2 1711 aa8.67□□□□□ -1.02
CDKN3-205ENST00000458126 COL6A3P12111 3177 aa8.67□□□□□ -1.02
CDKN3-205ENST00000458126 RGPD3A6NKT7 1758 aaPredicted RBP8.66□□□□□ -1.02
CDKN3-205ENST00000458126 RGPD4Q7Z3J3 1758 aa8.66□□□□□ -1.02
CDKN3-205ENST00000458126 NWD2Q9ULI1 1742 aa8.66□□□□□ -1.02
CDKN3-205ENST00000458126 THSD7AQ9UPZ6 1657 aa8.66□□□□□ -1.02
CDKN3-205ENST00000458126 TNFRSF10AO00220 468 aa8.66□□□□□ -1.02
CDKN3-205ENST00000458126 DXOO77932 396 aaKnown RBP8.66□□□□□ -1.02
CDKN3-205ENST00000458126 C16orf71Q8IYS4 520 aaPredicted RBP8.66□□□□□ -1.02
CDKN3-205ENST00000458126 REPIN1Q9BWE0 567 aaKnown RBP8.66□□□□□ -1.02
CDKN3-205ENST00000458126 HSPA8P11142 646 aaKnown RBP8.65□□□□□ -1.02
CDKN3-205ENST00000458126 CICQ96RK0 1608 aaPredicted RBP8.63□□□□□ -1.03
CDKN3-205ENST00000458126 FAM187AA6NFU0 413 aa8.63□□□□□ -1.03
CDKN3-205ENST00000458126 PLA2G5P39877 138 aa8.63□□□□□ -1.03
CDKN3-205ENST00000458126 FOXC1Q12948 553 aa8.63□□□□□ -1.03
CDKN3-205ENST00000458126 TTLL12Q14166 644 aaPredicted RBP8.63□□□□□ -1.03
CDKN3-205ENST00000458126 HLA-CQ95604 372 aa8.63□□□□□ -1.03
CDKN3-205ENST00000458126 ZNF787Q6DD87 383 aa8.62□□□□□ -1.03
CDKN3-205ENST00000458126 RETREG3Q86VR2 466 aa8.62□□□□□ -1.03
CDKN3-205ENST00000458126 TOR4AQ9NXH8 423 aa8.62□□□□□ -1.03
CDKN3-205ENST00000458126 ABCA3Q99758 1704 aa8.62□□□□□ -1.03
CDKN3-205ENST00000458126 PLCH1Q4KWH8 1693 aa8.62□□□□□ -1.03
CDKN3-205ENST00000458126 PLSCR1O15162 318 aa8.61□□□□□ -1.03
CDKN3-205ENST00000458126 GUCA2AQ02747 115 aa8.61□□□□□ -1.03
CDKN3-205ENST00000458126 SMC1BQ8NDV3 1235 aa8.61□□□□□ -1.03
CDKN3-205ENST00000458126 SPIRE2Q8WWL2 714 aa8.61□□□□□ -1.03
CDKN3-205ENST00000458126 PRDM6Q9NQX0 595 aa8.61□□□□□ -1.03
CDKN3-205ENST00000458126 NOS1P29475 1434 aa8.61□□□□□ -1.03
CDKN3-205ENST00000458126 C10orf71Q711Q0 1435 aa8.61□□□□□ -1.03
CDKN3-205ENST00000458126 WNT7AO00755 349 aa8.6□□□□□ -1.03
CDKN3-205ENST00000458126 FDX1P10109 184 aa8.6□□□□□ -1.03
CDKN3-205ENST00000458126 JUNDP17535 347 aa8.6□□□□□ -1.03
CDKN3-205ENST00000458126 TRIM32Q13049 653 aa8.6□□□□□ -1.03
CDKN3-205ENST00000458126 SLC15A2Q16348 729 aa8.6□□□□□ -1.03
CDKN3-205ENST00000458126 CYP4X1Q8N118 509 aa8.6□□□□□ -1.03
CDKN3-205ENST00000458126 STK32BQ9NY57 414 aa8.6□□□□□ -1.03
CDKN3-205ENST00000458126 ADGRL3Q9HAR2 1447 aa8.6□□□□□ -1.03
CDKN3-205ENST00000458126 UNC79Q9P2D8 2635 aa8.6□□□□□ -1.03
CDKN3-205ENST00000458126 PREX2Q70Z35 1606 aa8.59□□□□□ -1.03
CDKN3-205ENST00000458126 PTPN23Q9H3S7 1636 aa8.59□□□□□ -1.03
CDKN3-205ENST00000458126 GIGYF2Q6Y7W6 1299 aaKnown RBP8.59□□□□□ -1.03
CDKN3-205ENST00000458126 AK7Q96M32 723 aa8.59□□□□□ -1.03
CDKN3-205ENST00000458126 DHX29Q7Z478 1369 aaKnown RBP8.59□□□□□ -1.03
CDKN3-205ENST00000458126 PXDNLA1KZ92 1463 aa8.58□□□□□ -1.04
CDKN3-205ENST00000458126 C1orf167Q5SNV9 1468 aa8.58□□□□□ -1.04
CDKN3-205ENST00000458126 TRIM66O15016 1216 aa8.58□□□□□ -1.04
CDKN3-205ENST00000458126 KIF3BO15066 747 aa8.58□□□□□ -1.04
CDKN3-205ENST00000458126 AVPP01185 164 aa8.58□□□□□ -1.04
CDKN3-205ENST00000458126 GJA5P36382 358 aa8.58□□□□□ -1.04
CDKN3-205ENST00000458126 DIXDC1Q155Q3 683 aa8.58□□□□□ -1.04
CDKN3-205ENST00000458126 CRIPAKQ8N1N5 446 aa8.58□□□□□ -1.04
CDKN3-205ENST00000458126 SYMPKQ92797 1274 aaKnown RBP8.58□□□□□ -1.04
CDKN3-205ENST00000458126 COL26A1Q96A83 441 aa8.58□□□□□ -1.04
CDKN3-205ENST00000458126 COL25A1Q9BXS0 654 aaPredicted RBP8.58□□□□□ -1.04
CDKN3-205ENST00000458126 PCDHGC3Q9UN70 934 aa8.58□□□□□ -1.04
CDKN3-205ENST00000458126 TRPM2O94759 1503 aa8.58□□□□□ -1.04
CDKN3-205ENST00000458126 TBX22Q9Y458 520 aa8.57□□□□□ -1.04
CDKN3-205ENST00000458126 PIK3C2BO00750 1634 aa8.57□□□□□ -1.04
CDKN3-205ENST00000458126 C6orf229H3BNL8 230 aa8.56□□□□□ -1.04
CDKN3-205ENST00000458126 WNT7BP56706 349 aa8.56□□□□□ -1.04
CDKN3-205ENST00000458126 CCDC24Q8N4L8 307 aa8.56□□□□□ -1.04
CDKN3-205ENST00000458126 SNIP1Q8TAD8 396 aaKnown RBP8.56□□□□□ -1.04
CDKN3-205ENST00000458126 BEGAINQ9BUH8 593 aa8.56□□□□□ -1.04
CDKN3-205ENST00000458126 MCOLN1Q9GZU1 580 aa8.56□□□□□ -1.04
CDKN3-205ENST00000458126 AAASQ9NRG9 546 aa8.56□□□□□ -1.04
CDKN3-205ENST00000458126 MKRN1Q9UHC7 482 aaKnown RBP8.56□□□□□ -1.04
CDKN3-205ENST00000458126 COL24A1Q17RW2 1714 aa8.55□□□□□ -1.04
CDKN3-205ENST00000458126 TTC24A2A3L6 582 aaPredicted RBP8.55□□□□□ -1.04
CDKN3-205ENST00000458126 SPDYE5A6NIY4 337 aa8.55□□□□□ -1.04
CDKN3-205ENST00000458126 POLD1P28340 1107 aa8.55□□□□□ -1.04
CDKN3-205ENST00000458126 CTC1Q2NKJ3 1217 aa8.55□□□□□ -1.04
CDKN3-205ENST00000458126 PARP9Q8IXQ6 854 aa8.55□□□□□ -1.04
CDKN3-205ENST00000458126 NBPF15Q8N660 670 aa8.55□□□□□ -1.04
CDKN3-205ENST00000458126 FAM122AQ96E09 287 aa8.55□□□□□ -1.04
CDKN3-205ENST00000458126 PIK3R4Q99570 1358 aa8.55□□□□□ -1.04
CDKN3-205ENST00000458126 PLEKHG1Q9ULL1 1385 aa8.55□□□□□ -1.04
CDKN3-205ENST00000458126 ADGRL2O95490 1459 aa8.55□□□□□ -1.04
CDKN3-205ENST00000458126 NRAPQ86VF7 1730 aa8.54□□□□□ -1.04
CDKN3-205ENST00000458126 MOXD2PA6NHM9 499 aa8.54□□□□□ -1.04
CDKN3-205ENST00000458126 NDUFV2P19404 249 aa8.54□□□□□ -1.04
CDKN3-205ENST00000458126 SMCPP49901 116 aaPredicted RBP8.54□□□□□ -1.04
CDKN3-205ENST00000458126 NUDT12Q9BQG2 462 aa8.54□□□□□ -1.04
CDKN3-205ENST00000458126 SPATA31A5Q5VU36 1347 aa8.54□□□□□ -1.04
CDKN3-205ENST00000458126 SPATA31A7Q8IWB4 1347 aa8.54□□□□□ -1.04
CDKN3-205ENST00000458126 PXDNQ92626 1479 aa8.53□□□□□ -1.04
CDKN3-205ENST00000458126 FYCO1Q9BQS8 1478 aa8.53□□□□□ -1.04
CDKN3-205ENST00000458126 MS4A1P11836 297 aa8.53□□□□□ -1.04
CDKN3-205ENST00000458126 SOX10P56693 466 aa8.53□□□□□ -1.04
CDKN3-205ENST00000458126 DESI1Q6ICB0 168 aa8.53□□□□□ -1.04
CDKN3-205ENST00000458126 TBC1D2Q9BYX2 928 aa8.53□□□□□ -1.04
CDKN3-205ENST00000458126 UNC80Q8N2C7 3258 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms