RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 GDPD2Q9HCC8 539 aa13.73□□□□□ -0.21
SMARCAD1-204ENST00000457823 EXOC5O00471 708 aa13.73□□□□□ -0.21
SMARCAD1-204ENST00000457823 DENND4BO75064 1496 aaPredicted RBP13.73□□□□□ -0.21
SMARCAD1-204ENST00000457823 IL16Q14005 1332 aa13.73□□□□□ -0.21
SMARCAD1-204ENST00000457823 LUC7LQ9NQ29 371 aaKnown RBP13.73□□□□□ -0.21
SMARCAD1-204ENST00000457823 URB2Q14146 1524 aaKnown RBP13.73□□□□□ -0.21
SMARCAD1-204ENST00000457823 PTPRKQ15262 1439 aa13.72□□□□□ -0.21
SMARCAD1-204ENST00000457823 CUL7Q14999 1698 aa13.72□□□□□ -0.21
SMARCAD1-204ENST00000457823 RANBP6O60518 1105 aaKnown RBP13.72□□□□□ -0.21
SMARCAD1-204ENST00000457823 CCT2P78371 535 aaKnown RBP13.72□□□□□ -0.21
SMARCAD1-204ENST00000457823 HSP90AB3PQ58FF7 597 aa13.72□□□□□ -0.21
SMARCAD1-204ENST00000457823 MEIS3Q99687 375 aa13.72□□□□□ -0.21
SMARCAD1-204ENST00000457823 TFIP11Q9UBB9 837 aaKnown RBP13.72□□□□□ -0.21
SMARCAD1-204ENST00000457823 SMTNL1A8MU46 457 aa13.72□□□□□ -0.21
SMARCAD1-204ENST00000457823 GOLIM4O00461 696 aa13.72□□□□□ -0.21
SMARCAD1-204ENST00000457823 POLR3DP05423 398 aaPredicted RBP13.72□□□□□ -0.21
SMARCAD1-204ENST00000457823 EVI5LQ96CN4 794 aa13.72□□□□□ -0.21
SMARCAD1-204ENST00000457823 FAM135AQ9P2D6 1515 aa13.72□□□□□ -0.21
SMARCAD1-204ENST00000457823 CCDC196A0A1B0GTZ2 297 aa13.72□□□□□ -0.21
SMARCAD1-204ENST00000457823 ANKRD18BA2A2Z9 1011 aa13.72□□□□□ -0.21
SMARCAD1-204ENST00000457823 HMGB1P09429 215 aaKnown RBP13.72□□□□□ -0.21
SMARCAD1-204ENST00000457823 AXDND1Q5T1B0 1012 aaPredicted RBP13.72□□□□□ -0.21
SMARCAD1-204ENST00000457823 ANKRD24Q8TF21 1146 aa13.71□□□□□ -0.21
SMARCAD1-204ENST00000457823 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.71□□□□□ -0.21
SMARCAD1-204ENST00000457823 ANKIB1Q9P2G1 1089 aa13.71□□□□□ -0.21
SMARCAD1-204ENST00000457823 ZNF76P36508 570 aa13.71□□□□□ -0.22
SMARCAD1-204ENST00000457823 ZSCAN30Q86W11 494 aa13.71□□□□□ -0.22
SMARCAD1-204ENST00000457823 CTCFLQ8NI51 663 aaPredicted RBP13.71□□□□□ -0.22
SMARCAD1-204ENST00000457823 IQCA1Q86XH1 822 aa13.7□□□□□ -0.22
SMARCAD1-204ENST00000457823 ANKRD13DQ6ZTN6 518 aa13.7□□□□□ -0.22
SMARCAD1-204ENST00000457823 ARHGAP45Q92619 1136 aa13.7□□□□□ -0.22
SMARCAD1-204ENST00000457823 ZNF287Q9HBT7 754 aa13.7□□□□□ -0.22
SMARCAD1-204ENST00000457823 CEP131Q9UPN4 1083 aa13.7□□□□□ -0.22
SMARCAD1-204ENST00000457823 IFIT3O14879 490 aaKnown RBP13.7□□□□□ -0.22
SMARCAD1-204ENST00000457823 PPFIA3O75145 1194 aa13.7□□□□□ -0.22
SMARCAD1-204ENST00000457823 SLC5A1P13866 664 aa13.7□□□□□ -0.22
SMARCAD1-204ENST00000457823 EIF5P55010 431 aaKnown RBP13.7□□□□□ -0.22
SMARCAD1-204ENST00000457823 KLHL10Q6JEL2 608 aa13.7□□□□□ -0.22
SMARCAD1-204ENST00000457823 DZIP1Q86YF9 867 aaKnown RBP13.7□□□□□ -0.22
SMARCAD1-204ENST00000457823 CKAP2LQ8IYA6 745 aa13.7□□□□□ -0.22
SMARCAD1-204ENST00000457823 MYO6Q9UM54 1294 aa13.7□□□□□ -0.22
SMARCAD1-204ENST00000457823 ANKRD36BQ8N2N9 1353 aa13.7□□□□□ -0.22
SMARCAD1-204ENST00000457823 RHPN1Q8TCX5 695 aa13.7□□□□□ -0.22
SMARCAD1-204ENST00000457823 MPHOSPH10O00566 681 aaKnown RBP13.69□□□□□ -0.22
SMARCAD1-204ENST00000457823 CCDC183Q5T5S1 534 aa13.69□□□□□ -0.22
SMARCAD1-204ENST00000457823 TTC22Q5TAA0 569 aa13.69□□□□□ -0.22
SMARCAD1-204ENST00000457823 CCDC181Q5TID7 509 aa13.69□□□□□ -0.22
SMARCAD1-204ENST00000457823 C8orf58Q8NAV2 365 aa13.69□□□□□ -0.22
SMARCAD1-204ENST00000457823 TBC1D32Q96NH3 1257 aa13.69□□□□□ -0.22
SMARCAD1-204ENST00000457823 SLC12A7Q9Y666 1083 aa13.69□□□□□ -0.22
SMARCAD1-204ENST00000457823 RDXP35241 583 aaKnown RBP13.69□□□□□ -0.22
SMARCAD1-204ENST00000457823 NGLY1Q96IV0 654 aa13.69□□□□□ -0.22
SMARCAD1-204ENST00000457823 TMOD2Q9NZR1 351 aa13.69□□□□□ -0.22
SMARCAD1-204ENST00000457823 SNRPA1P09661 255 aaKnown RBP13.69□□□□□ -0.22
SMARCAD1-204ENST00000457823 CWC25Q9NXE8 425 aaPredicted RBP13.69□□□□□ -0.22
SMARCAD1-204ENST00000457823 GOLGA8BA8MQT2 603 aa13.68□□□□□ -0.22
SMARCAD1-204ENST00000457823 HAND2P61296 217 aa13.68□□□□□ -0.22
SMARCAD1-204ENST00000457823 HDAC1Q13547 482 aaPredicted RBP13.68□□□□□ -0.22
SMARCAD1-204ENST00000457823 ANO10Q9NW15 660 aa13.68□□□□□ -0.22
SMARCAD1-204ENST00000457823 ZRANB1Q9UGI0 708 aa13.68□□□□□ -0.22
SMARCAD1-204ENST00000457823 THOC2Q8NI27 1593 aaKnown RBP13.68□□□□□ -0.22
SMARCAD1-204ENST00000457823 SFPQP23246 707 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMARCAD1-204ENST00000457823 PIK3R4Q99570 1358 aa13.68□□□□□ -0.22
SMARCAD1-204ENST00000457823 EPB41L2O43491 1005 aaKnown RBP13.68□□□□□ -0.22
SMARCAD1-204ENST00000457823 SDSP20132 328 aa13.68□□□□□ -0.22
SMARCAD1-204ENST00000457823 ARHGAP29Q52LW3 1261 aa13.68□□□□□ -0.22
SMARCAD1-204ENST00000457823 ZNF444Q8N0Y2 327 aaPredicted RBP13.68□□□□□ -0.22
SMARCAD1-204ENST00000457823 CRACR2BQ8N4Y2 399 aaPredicted RBP13.68□□□□□ -0.22
SMARCAD1-204ENST00000457823 UQCRHLA0A096LP55 91 aa13.67□□□□□ -0.22
SMARCAD1-204ENST00000457823 UQCRHP07919 91 aa13.67□□□□□ -0.22
SMARCAD1-204ENST00000457823 WWC2Q6AWC2 1192 aa13.67□□□□□ -0.22
SMARCAD1-204ENST00000457823 H0YHG0 523 aa13.67□□□□□ -0.22
SMARCAD1-204ENST00000457823 STX6O43752 255 aa13.67□□□□□ -0.22
SMARCAD1-204ENST00000457823 NUCB1Q02818 461 aa13.67□□□□□ -0.22
SMARCAD1-204ENST00000457823 CADPS2Q86UW7 1296 aa13.67□□□□□ -0.22
SMARCAD1-204ENST00000457823 CHPF2Q9P2E5 772 aa13.67□□□□□ -0.22
SMARCAD1-204ENST00000457823 POLKQ9UBT6 870 aa13.67□□□□□ -0.22
SMARCAD1-204ENST00000457823 SEC63Q9UGP8 760 aaKnown RBP13.67□□□□□ -0.22
SMARCAD1-204ENST00000457823 USP16Q9Y5T5 823 aa13.67□□□□□ -0.22
SMARCAD1-204ENST00000457823 GJB2P29033 226 aa13.67□□□□□ -0.22
SMARCAD1-204ENST00000457823 SLC39A6Q13433 755 aa13.67□□□□□ -0.22
SMARCAD1-204ENST00000457823 TEX13AQ9BXU3 409 aaPredicted RBP13.67□□□□□ -0.22
SMARCAD1-204ENST00000457823 RNF41Q9H4P4 317 aaPredicted RBP13.67□□□□□ -0.22
SMARCAD1-204ENST00000457823 GOLGA8AA7E2F4 631 aa13.66□□□□□ -0.22
SMARCAD1-204ENST00000457823 USP25Q9UHP3 1055 aa13.66□□□□□ -0.22
SMARCAD1-204ENST00000457823 KDM5BQ9UGL1 1544 aa13.66□□□□□ -0.22
SMARCAD1-204ENST00000457823 COPS6Q7L5N1 327 aa13.66□□□□□ -0.22
SMARCAD1-204ENST00000457823 BAG4O95429 457 aaKnown RBP13.66□□□□□ -0.22
SMARCAD1-204ENST00000457823 DDX46Q7L014 1031 aaKnown RBP13.66□□□□□ -0.22
SMARCAD1-204ENST00000457823 TESK2Q96S53 571 aa13.66□□□□□ -0.22
SMARCAD1-204ENST00000457823 SEPT11Q9NVA2 429 aaKnown RBP13.66□□□□□ -0.22
SMARCAD1-204ENST00000457823 NEK1Q96PY6 1258 aa13.65□□□□□ -0.22
SMARCAD1-204ENST00000457823 PDE1AP54750 535 aa13.65□□□□□ -0.22
SMARCAD1-204ENST00000457823 ANKRD44Q8N8A2 993 aa13.65□□□□□ -0.22
SMARCAD1-204ENST00000457823 XAGE3Q8WTP9 111 aa13.65□□□□□ -0.22
SMARCAD1-204ENST00000457823 TNNQ9UQP3 1299 aa13.65□□□□□ -0.22
SMARCAD1-204ENST00000457823 ATP10BO94823 1461 aa13.65□□□□□ -0.22
SMARCAD1-204ENST00000457823 RAB11FIP4Q86YS3 637 aa13.65□□□□□ -0.22
SMARCAD1-204ENST00000457823 FSIP1Q8NA03 581 aa13.65□□□□□ -0.22
SMARCAD1-204ENST00000457823 ORC3Q9UBD5 711 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms