RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 RTCBQ9Y3I0 505 aaKnown RBP16.01■□□□□ 0.15
CNOT3-205ENST00000457463 QSER1Q2KHR3 1735 aa16.01■□□□□ 0.15
CNOT3-205ENST00000457463 CHL1O00533 1208 aa16■□□□□ 0.15
CNOT3-205ENST00000457463 A1BGP04217 495 aa16■□□□□ 0.15
CNOT3-205ENST00000457463 SSFA2P28290 1259 aa16■□□□□ 0.15
CNOT3-205ENST00000457463 KRT24Q2M2I5 525 aa16■□□□□ 0.15
CNOT3-205ENST00000457463 MTFR1LQ9H019 292 aa16■□□□□ 0.15
CNOT3-205ENST00000457463 SNRPA1P09661 255 aaKnown RBP15.99■□□□□ 0.15
CNOT3-205ENST00000457463 CANXP27824 592 aaKnown RBP15.99■□□□□ 0.15
CNOT3-205ENST00000457463 TRAPPC3LQ5T215 181 aa15.99■□□□□ 0.15
CNOT3-205ENST00000457463 SGIP1Q9BQI5 828 aa15.99■□□□□ 0.15
CNOT3-205ENST00000457463 SPON1Q9HCB6 807 aa15.99■□□□□ 0.15
CNOT3-205ENST00000457463 SOS1Q07889 1333 aaPredicted RBP15.98■□□□□ 0.15
CNOT3-205ENST00000457463 GIGYF1O75420 1035 aaPredicted RBP15.98■□□□□ 0.15
CNOT3-205ENST00000457463 STARD3NLO95772 234 aa15.98■□□□□ 0.15
CNOT3-205ENST00000457463 WWC1Q8IX03 1113 aa15.98■□□□□ 0.15
CNOT3-205ENST00000457463 FLAD1Q8NFF5 587 aa15.98■□□□□ 0.15
CNOT3-205ENST00000457463 SRP68Q9UHB9 627 aaKnown RBP15.98■□□□□ 0.15
CNOT3-205ENST00000457463 ZNF853P0CG23 659 aa15.97■□□□□ 0.15
CNOT3-205ENST00000457463 HMGB2P26583 209 aaKnown RBP15.97■□□□□ 0.15
CNOT3-205ENST00000457463 SLC16A10Q8TF71 515 aa15.97■□□□□ 0.15
CNOT3-205ENST00000457463 CFAP44Q96MT7 982 aa15.97■□□□□ 0.15
CNOT3-205ENST00000457463 MBIPQ9NS73 344 aa15.97■□□□□ 0.15
CNOT3-205ENST00000457463 NBPF26B4DH59 902 aa15.96■□□□□ 0.15
CNOT3-205ENST00000457463 CCDC27Q2M243 656 aa15.96■□□□□ 0.15
CNOT3-205ENST00000457463 NBPF10Q6P3W6 841 aaKnown RBP15.96■□□□□ 0.15
CNOT3-205ENST00000457463 NBPF15Q8N660 670 aa15.96■□□□□ 0.15
CNOT3-205ENST00000457463 TEX13AQ9BXU3 409 aaPredicted RBP15.96■□□□□ 0.15
CNOT3-205ENST00000457463 BABAM1Q9NWV8 329 aa15.96■□□□□ 0.15
CNOT3-205ENST00000457463 LRP5O75197 1615 aa15.95■□□□□ 0.14
CNOT3-205ENST00000457463 EIF5P55010 431 aaKnown RBP15.95■□□□□ 0.14
CNOT3-205ENST00000457463 ADRA2BP18089 450 aa15.94■□□□□ 0.14
CNOT3-205ENST00000457463 RFC4P35249 363 aa15.94■□□□□ 0.14
CNOT3-205ENST00000457463 IFT57Q9NWB7 429 aa15.94■□□□□ 0.14
CNOT3-205ENST00000457463 ZNF330Q9Y3S2 320 aaPredicted RBP15.94■□□□□ 0.14
CNOT3-205ENST00000457463 COL15A1P39059 1388 aa15.93■□□□□ 0.14
CNOT3-205ENST00000457463 GYS1P13807 737 aa15.93■□□□□ 0.14
CNOT3-205ENST00000457463 EIF2S2P20042 333 aaKnown RBP15.93■□□□□ 0.14
CNOT3-205ENST00000457463 NECTIN2Q92692 538 aa15.93■□□□□ 0.14
CNOT3-205ENST00000457463 TSR2Q969E8 191 aaKnown RBP15.93■□□□□ 0.14
CNOT3-205ENST00000457463 SPINK5Q9NQ38 1064 aaPredicted RBP15.93■□□□□ 0.14
CNOT3-205ENST00000457463 C4AP0C0L4 1744 aa15.92■□□□□ 0.14
CNOT3-205ENST00000457463 IL6STP40189 918 aaPredicted RBP15.92■□□□□ 0.14
CNOT3-205ENST00000457463 GNAI1P63096 354 aa15.92■□□□□ 0.14
CNOT3-205ENST00000457463 FKBP8Q14318 412 aa15.92■□□□□ 0.14
CNOT3-205ENST00000457463 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
CNOT3-205ENST00000457463 USPL1Q5W0Q7 1092 aa15.92■□□□□ 0.14
CNOT3-205ENST00000457463 BCL2L12Q9HB09 334 aa15.92■□□□□ 0.14
CNOT3-205ENST00000457463 TBC1D2BQ9UPU7 963 aa15.92■□□□□ 0.14
CNOT3-205ENST00000457463 USP42Q9H9J4 1324 aaKnown RBP15.92■□□□□ 0.14
CNOT3-205ENST00000457463 ANXA1P04083 346 aa15.91■□□□□ 0.14
CNOT3-205ENST00000457463 PPP1R1BQ9UD71 204 aaPredicted RBP15.91■□□□□ 0.14
CNOT3-205ENST00000457463 ELL2O00472 640 aaPredicted RBP15.9■□□□□ 0.14
CNOT3-205ENST00000457463 CALD1Q05682 793 aaKnown RBP15.9■□□□□ 0.14
CNOT3-205ENST00000457463 PROSER3Q2NL68 480 aa15.9■□□□□ 0.14
CNOT3-205ENST00000457463 NGEFQ8N5V2 710 aa15.9■□□□□ 0.14
CNOT3-205ENST00000457463 C8orf58Q8NAV2 365 aa15.9■□□□□ 0.14
CNOT3-205ENST00000457463 ARXQ96QS3 562 aa15.9■□□□□ 0.14
CNOT3-205ENST00000457463 NARFQ9UHQ1 456 aa15.9■□□□□ 0.14
CNOT3-205ENST00000457463 COL24A1Q17RW2 1714 aa15.9■□□□□ 0.14
CNOT3-205ENST00000457463 MYL6BP14649 208 aa15.89■□□□□ 0.13
CNOT3-205ENST00000457463 POLD1P28340 1107 aa15.89■□□□□ 0.13
CNOT3-205ENST00000457463 PDIA6Q15084 440 aa15.89■□□□□ 0.13
CNOT3-205ENST00000457463 TSPYL6Q8N831 410 aa15.89■□□□□ 0.13
CNOT3-205ENST00000457463 LAMB4A4D0S4 1761 aa15.89■□□□□ 0.13
CNOT3-205ENST00000457463 ZNF521Q96K83 1311 aa15.89■□□□□ 0.13
CNOT3-205ENST00000457463 ZPR1O75312 459 aa15.88■□□□□ 0.13
CNOT3-205ENST00000457463 MMP10P09238 476 aa15.88■□□□□ 0.13
CNOT3-205ENST00000457463 DUSP27Q5VZP5 1158 aa15.88■□□□□ 0.13
CNOT3-205ENST00000457463 WDR63Q8IWG1 891 aa15.88■□□□□ 0.13
CNOT3-205ENST00000457463 FHDC1Q9C0D6 1143 aaPredicted RBP15.88■□□□□ 0.13
CNOT3-205ENST00000457463 CAMTA2O94983 1202 aa15.87■□□□□ 0.13
CNOT3-205ENST00000457463 DDR1Q08345 913 aa15.87■□□□□ 0.13
CNOT3-205ENST00000457463 TTLL7Q6ZT98 887 aa15.87■□□□□ 0.13
CNOT3-205ENST00000457463 LRP10Q7Z4F1 713 aa15.87■□□□□ 0.13
CNOT3-205ENST00000457463 DZIP3Q86Y13 1208 aaKnown RBP15.87■□□□□ 0.13
CNOT3-205ENST00000457463 KLHL34Q8N239 644 aa15.87■□□□□ 0.13
CNOT3-205ENST00000457463 NLGN1Q8N2Q7 840 aa15.87■□□□□ 0.13
CNOT3-205ENST00000457463 IL16Q14005 1332 aa15.87■□□□□ 0.13
CNOT3-205ENST00000457463 A0A087WZG4 1122 aa15.86■□□□□ 0.13
CNOT3-205ENST00000457463 FANCIQ9NVI1 1328 aa15.86■□□□□ 0.13
CNOT3-205ENST00000457463 TM4SF1P30408 202 aa15.85■□□□□ 0.13
CNOT3-205ENST00000457463 NFIXQ14938 502 aa15.85■□□□□ 0.13
CNOT3-205ENST00000457463 HDGFL1Q5TGJ6 251 aa15.85■□□□□ 0.13
CNOT3-205ENST00000457463 BICDL1Q6ZP65 573 aa15.85■□□□□ 0.13
CNOT3-205ENST00000457463 SYT17Q9BSW7 474 aa15.85■□□□□ 0.13
CNOT3-205ENST00000457463 CHPF2Q9P2E5 772 aa15.85■□□□□ 0.13
CNOT3-205ENST00000457463 HLFQ16534 295 aa15.84■□□□□ 0.13
CNOT3-205ENST00000457463 TBC1D9BQ66K14 1250 aa15.84■□□□□ 0.13
CNOT3-205ENST00000457463 TCERG1O14776 1098 aaKnown RBP15.83■□□□□ 0.12
CNOT3-205ENST00000457463 EXOSC9Q06265 439 aaKnown RBP15.83■□□□□ 0.12
CNOT3-205ENST00000457463 NPM2Q86SE8 214 aaKnown RBP15.83■□□□□ 0.12
CNOT3-205ENST00000457463 NLGN2Q8NFZ4 835 aa15.83■□□□□ 0.12
CNOT3-205ENST00000457463 CDCA7LQ96GN5 454 aa15.83■□□□□ 0.12
CNOT3-205ENST00000457463 POLRMTO00411 1230 aaKnown RBP15.82■□□□□ 0.12
CNOT3-205ENST00000457463 HOXB7P09629 217 aa15.82■□□□□ 0.12
CNOT3-205ENST00000457463 ERBB4Q15303 1308 aa15.82■□□□□ 0.12
CNOT3-205ENST00000457463 SCN7AQ01118 1682 aa15.81■□□□□ 0.12
CNOT3-205ENST00000457463 AIMP1Q12904 312 aaKnown RBP15.81■□□□□ 0.12
CNOT3-205ENST00000457463 COPS6Q7L5N1 327 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms