RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 KIF1BPQ96EK5 621 aa15.28■□□□□ 0.04
ECHDC1-209ENST00000454591 LTV1Q96GA3 475 aaPredicted RBP15.28■□□□□ 0.04
ECHDC1-209ENST00000454591 HDAC5Q9UQL6 1122 aa15.28■□□□□ 0.04
ECHDC1-209ENST00000454591 SCN11AQ9UI33 1791 aa15.28■□□□□ 0.04
ECHDC1-209ENST00000454591 RNMTO43148 476 aaKnown RBP15.27■□□□□ 0.04
ECHDC1-209ENST00000454591 ZNF445P59923 1031 aa15.27■□□□□ 0.04
ECHDC1-209ENST00000454591 USHBP1Q8N6Y0 703 aa15.27■□□□□ 0.04
ECHDC1-209ENST00000454591 LGR6Q9HBX8 967 aa15.27■□□□□ 0.04
ECHDC1-209ENST00000454591 RTN4Q9NQC3 1192 aaKnown RBP15.27■□□□□ 0.04
ECHDC1-209ENST00000454591 PXDNQ92626 1479 aa15.27■□□□□ 0.04
ECHDC1-209ENST00000454591 ZNF530Q6P9A1 599 aaPredicted RBP15.27■□□□□ 0.03
ECHDC1-209ENST00000454591 PPP1R42Q7Z4L9 355 aa15.27■□□□□ 0.03
ECHDC1-209ENST00000454591 PI4K2BQ8TCG2 481 aa15.27■□□□□ 0.03
ECHDC1-209ENST00000454591 RHPN1Q8TCX5 695 aa15.27■□□□□ 0.03
ECHDC1-209ENST00000454591 LMBRD1Q9NUN5 540 aa15.27■□□□□ 0.03
ECHDC1-209ENST00000454591 DBF4Q9UBU7 674 aaPredicted RBP15.27■□□□□ 0.03
ECHDC1-209ENST00000454591 TTC41PQ6P2S7 1318 aa15.26■□□□□ 0.03
ECHDC1-209ENST00000454591 PLEKHG5O94827 1062 aa15.26■□□□□ 0.03
ECHDC1-209ENST00000454591 GCP02774 474 aa15.26■□□□□ 0.03
ECHDC1-209ENST00000454591 TEFQ10587 303 aa15.26■□□□□ 0.03
ECHDC1-209ENST00000454591 FOXD4L1Q9NU39 408 aa15.26■□□□□ 0.03
ECHDC1-209ENST00000454591 ZDHHC9Q9Y397 364 aa15.26■□□□□ 0.03
ECHDC1-209ENST00000454591 UTYO14607 1347 aa15.25■□□□□ 0.03
ECHDC1-209ENST00000454591 TRHP20396 242 aaPredicted RBP15.25■□□□□ 0.03
ECHDC1-209ENST00000454591 ESCO1Q5FWF5 840 aa15.25■□□□□ 0.03
ECHDC1-209ENST00000454591 GAS2L3Q86XJ1 694 aa15.25■□□□□ 0.03
ECHDC1-209ENST00000454591 TMX3Q96JJ7 454 aa15.25■□□□□ 0.03
ECHDC1-209ENST00000454591 PANK2Q9BZ23 570 aa15.25■□□□□ 0.03
ECHDC1-209ENST00000454591 CHPF2Q9P2E5 772 aa15.25■□□□□ 0.03
ECHDC1-209ENST00000454591 COL18A1P39060 1754 aa15.24■□□□□ 0.03
ECHDC1-209ENST00000454591 BTBD11A6QL63 1104 aa15.24■□□□□ 0.03
ECHDC1-209ENST00000454591 HSPA4P34932 840 aa15.24■□□□□ 0.03
ECHDC1-209ENST00000454591 NECTIN2Q92692 538 aa15.24■□□□□ 0.03
ECHDC1-209ENST00000454591 RGPD5Q99666 1765 aa15.24■□□□□ 0.03
ECHDC1-209ENST00000454591 C1orf167Q5SNV9 1468 aa15.23■□□□□ 0.03
ECHDC1-209ENST00000454591 PI4KAP2A4QPH2 592 aa15.23■□□□□ 0.03
ECHDC1-209ENST00000454591 GIGYF1O75420 1035 aaPredicted RBP15.23■□□□□ 0.03
ECHDC1-209ENST00000454591 NEK4P51957 841 aa15.23■□□□□ 0.03
ECHDC1-209ENST00000454591 C14orf37Q86TY3 774 aa15.23■□□□□ 0.03
ECHDC1-209ENST00000454591 PI4KAP1Q8N8J0 262 aa15.23■□□□□ 0.03
ECHDC1-209ENST00000454591 RAD50Q92878 1312 aa15.23■□□□□ 0.03
ECHDC1-209ENST00000454591 MRC1P22897 1456 aa15.23■□□□□ 0.03
ECHDC1-209ENST00000454591 SGSM2O43147 1006 aa15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 SURF6O75683 361 aaKnown RBP15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 BRD1O95696 1058 aa15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 C1orf141Q5JVX7 400 aa15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 KSR2Q6VAB6 950 aa15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 UNC5CLQ8IV45 518 aa15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 ZGPATQ8N5A5 531 aaKnown RBP15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 DDX49Q9Y6V7 483 aaKnown RBP15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 DCCP43146 1447 aa15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 TRIM6-TRIM34B2RNG4 842 aa15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 SRGAP3O43295 1099 aa15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 NBPF7P0C2Y1 421 aaPredicted RBP15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 CLCN1P35523 988 aa15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 ERC1Q8IUD2 1116 aa15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 ANKRD24Q8TF21 1146 aa15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 PPP1R9BQ96SB3 815 aa15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 RRAGDQ9NQL2 400 aaPredicted RBP15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 HYPKQ9NX55 129 aa15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 PALD1Q9ULE6 856 aa15.22■□□□□ 0.03
ECHDC1-209ENST00000454591 KCNQ3O43525 872 aa15.21■□□□□ 0.03
ECHDC1-209ENST00000454591 TSHZ3Q63HK5 1081 aa15.21■□□□□ 0.03
ECHDC1-209ENST00000454591 PKD1L3Q7Z443 1732 aa15.21■□□□□ 0.03
ECHDC1-209ENST00000454591 CNTROBQ8N137 903 aa15.21■□□□□ 0.03
ECHDC1-209ENST00000454591 RILPL2Q969X0 211 aa15.21■□□□□ 0.03
ECHDC1-209ENST00000454591 LRRC59Q96AG4 307 aaKnown RBP15.21■□□□□ 0.03
ECHDC1-209ENST00000454591 ANO2Q9NQ90 1003 aa15.21■□□□□ 0.03
ECHDC1-209ENST00000454591 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.21■□□□□ 0.033e-7■■□□□ 13.1
ECHDC1-209ENST00000454591 GLRX3O76003 335 aaKnown RBP15.2■□□□□ 0.02
ECHDC1-209ENST00000454591 EIF2S2P20042 333 aaKnown RBP15.2■□□□□ 0.02
ECHDC1-209ENST00000454591 PKP1Q13835 747 aa15.2■□□□□ 0.02
ECHDC1-209ENST00000454591 MCTP1Q6DN14 999 aa15.2■□□□□ 0.02
ECHDC1-209ENST00000454591 KLHL34Q8N239 644 aa15.2■□□□□ 0.02
ECHDC1-209ENST00000454591 KCNB2Q92953 911 aa15.2■□□□□ 0.02
ECHDC1-209ENST00000454591 C5P01031 1676 aa15.2■□□□□ 0.02
ECHDC1-209ENST00000454591 PARP4Q9UKK3 1724 aaKnown RBP15.2■□□□□ 0.02
ECHDC1-209ENST00000454591 LINS1Q8NG48 757 aa15.19■□□□□ 0.02
ECHDC1-209ENST00000454591 LSG1Q9H089 658 aaKnown RBP15.19■□□□□ 0.02
ECHDC1-209ENST00000454591 IL1RAPL2Q9NP60 686 aa15.19■□□□□ 0.02
ECHDC1-209ENST00000454591 DDX21Q9NR30 783 aaKnown RBP eCLIP15.19■□□□□ 0.02
ECHDC1-209ENST00000454591 COL15A1P39059 1388 aa15.19■□□□□ 0.02
ECHDC1-209ENST00000454591 MBD3O95983 291 aa15.18■□□□□ 0.02
ECHDC1-209ENST00000454591 CCDC173Q0VFZ6 552 aa15.18■□□□□ 0.02
ECHDC1-209ENST00000454591 MPRIPQ6WCQ1 1025 aa15.18■□□□□ 0.02
ECHDC1-209ENST00000454591 ORAI2Q96SN7 254 aa15.18■□□□□ 0.02
ECHDC1-209ENST00000454591 SNRKQ9NRH2 765 aa15.18■□□□□ 0.02
ECHDC1-209ENST00000454591 ERBB3P21860 1342 aa15.18■□□□□ 0.02
ECHDC1-209ENST00000454591 NUTM1Q86Y26 1132 aa15.17■□□□□ 0.02
ECHDC1-209ENST00000454591 TTC14Q96N46 770 aa15.17■□□□□ 0.02
ECHDC1-209ENST00000454591 DDX58O95786 925 aaKnown RBP15.17■□□□□ 0.02
ECHDC1-209ENST00000454591 KRT28Q7Z3Y7 464 aa15.17■□□□□ 0.02
ECHDC1-209ENST00000454591 RUFY2Q8WXA3 655 aa15.17■□□□□ 0.02
ECHDC1-209ENST00000454591 IL25Q9H293 177 aa15.17■□□□□ 0.02
ECHDC1-209ENST00000454591 MAP3K2Q9Y2U5 619 aa15.17■□□□□ 0.02
ECHDC1-209ENST00000454591 LAMB4A4D0S4 1761 aa15.16■□□□□ 0.02
ECHDC1-209ENST00000454591 ZSCAN23Q3MJ62 389 aa15.16■□□□□ 0.02
ECHDC1-209ENST00000454591 CLASRPQ8N2M8 674 aaKnown RBP15.16■□□□□ 0.02
ECHDC1-209ENST00000454591 TM6SF1Q9BZW5 370 aa15.16■□□□□ 0.02
ECHDC1-209ENST00000454591 C19orf44Q9H6X5 657 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms