RNA–Protein interactions for RNA: ENST00000452859.6

SNX11-203, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-203ENST00000452859 MIS18AQ9NYP9 233 aa25.52■■□□□ 1.68
SNX11-203ENST00000452859 APAF1O14727 1248 aa25.52■■□□□ 1.68
SNX11-203ENST00000452859 SNRPA1P09661 255 aaKnown RBP25.52■■□□□ 1.68
SNX11-203ENST00000452859 ARHGEF1Q92888 912 aaKnown RBP25.52■■□□□ 1.68
SNX11-203ENST00000452859 MSL1Q68DK7 614 aa25.5■■□□□ 1.67
SNX11-203ENST00000452859 BABAM1Q9NWV8 329 aa25.5■■□□□ 1.67
SNX11-203ENST00000452859 MYH14Q7Z406 1995 aaKnown RBP25.49■■□□□ 1.67
SNX11-203ENST00000452859 TSPYL4Q9UJ04 414 aa25.48■■□□□ 1.67
SNX11-203ENST00000452859 TRIM35Q9UPQ4 493 aa25.48■■□□□ 1.67
SNX11-203ENST00000452859 NPM2Q86SE8 214 aaKnown RBP25.48■■□□□ 1.67
SNX11-203ENST00000452859 ZBTB1Q9Y2K1 713 aa25.48■■□□□ 1.67
SNX11-203ENST00000452859 CANXP27824 592 aaKnown RBP25.47■■□□□ 1.67
SNX11-203ENST00000452859 NLGN1Q8N2Q7 840 aa25.47■■□□□ 1.67
SNX11-203ENST00000452859 SOS1Q07889 1333 aaPredicted RBP25.47■■□□□ 1.67
SNX11-203ENST00000452859 CALD1Q05682 793 aaKnown RBP25.45■■□□□ 1.67
SNX11-203ENST00000452859 ZPR1O75312 459 aa25.45■■□□□ 1.66
SNX11-203ENST00000452859 USP16Q9Y5T5 823 aa25.45■■□□□ 1.66
SNX11-203ENST00000452859 EIF4A1P60842 406 aaKnown RBP25.44■■□□□ 1.66
SNX11-203ENST00000452859 COL24A1Q17RW2 1714 aa25.44■■□□□ 1.66
SNX11-203ENST00000452859 A0A087WZG4 1122 aa25.43■■□□□ 1.66
SNX11-203ENST00000452859 IL6STP40189 918 aaPredicted RBP25.42■■□□□ 1.66
SNX11-203ENST00000452859 FHDC1Q9C0D6 1143 aaPredicted RBP25.42■■□□□ 1.66
SNX11-203ENST00000452859 LAS1LQ9Y4W2 734 aaKnown RBP25.42■■□□□ 1.66
SNX11-203ENST00000452859 COL15A1P39059 1388 aa25.42■■□□□ 1.66
SNX11-203ENST00000452859 A1BGP04217 495 aa25.41■■□□□ 1.66
SNX11-203ENST00000452859 USP42Q9H9J4 1324 aaKnown RBP25.41■■□□□ 1.66
SNX11-203ENST00000452859 KDM3BQ7LBC6 1761 aa25.41■■□□□ 1.66
SNX11-203ENST00000452859 GIGYF1O75420 1035 aaPredicted RBP25.41■■□□□ 1.66
SNX11-203ENST00000452859 GYS1P13807 737 aa25.41■■□□□ 1.66
SNX11-203ENST00000452859 EIF5P55010 431 aaKnown RBP25.41■■□□□ 1.66
SNX11-203ENST00000452859 FAM9BQ8IZU0 186 aa25.41■■□□□ 1.66
SNX11-203ENST00000452859 KLHL34Q8N239 644 aa25.41■■□□□ 1.66
SNX11-203ENST00000452859 ZNF330Q9Y3S2 320 aaPredicted RBP25.41■■□□□ 1.66
SNX11-203ENST00000452859 PRAMEF22A3QJZ6 481 aa25.4■■□□□ 1.66
SNX11-203ENST00000452859 CHL1O00533 1208 aa25.4■■□□□ 1.66
SNX11-203ENST00000452859 SYT17Q9BSW7 474 aa25.4■■□□□ 1.66
SNX11-203ENST00000452859 NARFQ9UHQ1 456 aa25.4■■□□□ 1.66
SNX11-203ENST00000452859 SRP68Q9UHB9 627 aaKnown RBP25.39■■□□□ 1.66
SNX11-203ENST00000452859 CFAP44Q96MT7 982 aa25.38■■□□□ 1.65
SNX11-203ENST00000452859 DCAF8L1A6NGE4 600 aa25.37■■□□□ 1.65
SNX11-203ENST00000452859 MMP10P09238 476 aa25.37■■□□□ 1.65
SNX11-203ENST00000452859 NCBP3Q53F19 620 aaKnown RBP25.37■■□□□ 1.65
SNX11-203ENST00000452859 USPL1Q5W0Q7 1092 aa25.37■■□□□ 1.65
SNX11-203ENST00000452859 C4AP0C0L4 1744 aa25.37■■□□□ 1.65
SNX11-203ENST00000452859 CCDC27Q2M243 656 aa25.36■■□□□ 1.65
SNX11-203ENST00000452859 GNAI1P63096 354 aa25.35■■□□□ 1.65
SNX11-203ENST00000452859 MIER1Q8N108 512 aa25.35■■□□□ 1.65
SNX11-203ENST00000452859 PARP3Q9Y6F1 533 aa25.35■■□□□ 1.65
SNX11-203ENST00000452859 FKBP8Q14318 412 aa25.34■■□□□ 1.65
SNX11-203ENST00000452859 IFT57Q9NWB7 429 aa25.34■■□□□ 1.65
SNX11-203ENST00000452859 CCER2I3L3R5 266 aa25.34■■□□□ 1.65
SNX11-203ENST00000452859 CD2APQ9Y5K6 639 aa25.34■■□□□ 1.65
SNX11-203ENST00000452859 TBC1D2BQ9UPU7 963 aa25.32■■□□□ 1.64
SNX11-203ENST00000452859 PIP4K2AP48426 406 aaPredicted RBP25.31■■□□□ 1.64
SNX11-203ENST00000452859 DZIP3Q86Y13 1208 aaKnown RBP25.31■■□□□ 1.64
SNX11-203ENST00000452859 WWC1Q8IX03 1113 aa25.31■■□□□ 1.64
SNX11-203ENST00000452859 ERBB4Q15303 1308 aa25.31■■□□□ 1.64
SNX11-203ENST00000452859 NBPF26B4DH59 902 aa25.3■■□□□ 1.64
SNX11-203ENST00000452859 NBPF10Q6P3W6 841 aaKnown RBP25.3■■□□□ 1.64
SNX11-203ENST00000452859 NGEFQ8N5V2 710 aa25.3■■□□□ 1.64
SNX11-203ENST00000452859 NBPF15Q8N660 670 aa25.3■■□□□ 1.64
SNX11-203ENST00000452859 LAMB4A4D0S4 1761 aa25.3■■□□□ 1.64
SNX11-203ENST00000452859 ZNF853P0CG23 659 aa25.3■■□□□ 1.64
SNX11-203ENST00000452859 MBIPQ9NS73 344 aa25.3■■□□□ 1.64
SNX11-203ENST00000452859 EIF2S2P20042 333 aaKnown RBP25.29■■□□□ 1.64
SNX11-203ENST00000452859 SENP3-EIF4A1A0A087X0R7 540 aa25.28■■□□□ 1.64
SNX11-203ENST00000452859 TM4SF1P30408 202 aa25.28■■□□□ 1.64
SNX11-203ENST00000452859 HOXB7P09629 217 aa25.27■■□□□ 1.64
SNX11-203ENST00000452859 BCL2L12Q9HB09 334 aa25.27■■□□□ 1.64
SNX11-203ENST00000452859 ZNF652Q9Y2D9 606 aa25.26■■□□□ 1.63
SNX11-203ENST00000452859 SALL2Q9Y467 1007 aaPredicted RBP25.26■■□□□ 1.63
SNX11-203ENST00000452859 NFIXQ14938 502 aa25.26■■□□□ 1.63
SNX11-203ENST00000452859 CAMTA2O94983 1202 aa25.25■■□□□ 1.63
SNX11-203ENST00000452859 MYL6BP14649 208 aa25.25■■□□□ 1.63
SNX11-203ENST00000452859 IL16Q14005 1332 aa25.25■■□□□ 1.63
SNX11-203ENST00000452859 RGL2O15211 777 aa25.24■■□□□ 1.63
SNX11-203ENST00000452859 DDR1Q08345 913 aa25.24■■□□□ 1.63
SNX11-203ENST00000452859 CLEC4GQ6UXB4 293 aa25.24■■□□□ 1.63
SNX11-203ENST00000452859 NLGN2Q8NFZ4 835 aa25.24■■□□□ 1.63
SNX11-203ENST00000452859 POLRMTO00411 1230 aaKnown RBP25.23■■□□□ 1.63
SNX11-203ENST00000452859 KRT24Q2M2I5 525 aa25.23■■□□□ 1.63
SNX11-203ENST00000452859 BICDL1Q6ZP65 573 aa25.23■■□□□ 1.63
SNX11-203ENST00000452859 WDR63Q8IWG1 891 aa25.23■■□□□ 1.63
SNX11-203ENST00000452859 CHMP4AQ9BY43 222 aa25.23■■□□□ 1.63
SNX11-203ENST00000452859 DUSP27Q5VZP5 1158 aa25.23■■□□□ 1.63
SNX11-203ENST00000452859 KIF6Q6ZMV9 814 aa25.23■■□□□ 1.63
SNX11-203ENST00000452859 HDGFL1Q5TGJ6 251 aa25.22■■□□□ 1.63
SNX11-203ENST00000452859 SETDB2Q96T68 719 aa25.22■■□□□ 1.63
SNX11-203ENST00000452859 TBC1D9BQ66K14 1250 aa25.21■■□□□ 1.63
SNX11-203ENST00000452859 NECTIN2Q92692 538 aa25.21■■□□□ 1.63
SNX11-203ENST00000452859 SERPINB2P05120 415 aa25.2■■□□□ 1.62
SNX11-203ENST00000452859 TGFB2P61812 414 aa25.2■■□□□ 1.62
SNX11-203ENST00000452859 GPR162Q16538 588 aa25.19■■□□□ 1.62
SNX11-203ENST00000452859 SCN7AQ01118 1682 aa25.19■■□□□ 1.62
SNX11-203ENST00000452859 ERVV-1B6SEH8 477 aa25.19■■□□□ 1.62
SNX11-203ENST00000452859 DDX21Q9NR30 783 aaKnown RBP eCLIP25.19■■□□□ 1.62
SNX11-203ENST00000452859 C10orf71Q711Q0 1435 aa25.18■■□□□ 1.62
SNX11-203ENST00000452859 PDIA6Q15084 440 aa25.18■■□□□ 1.62
SNX11-203ENST00000452859 PELP1Q8IZL8 1130 aaKnown RBP25.18■■□□□ 1.62
SNX11-203ENST00000452859 DBF4Q9UBU7 674 aaPredicted RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms