RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 AMOTL2Q9Y2J4 779 aa16.27■□□□□ 0.19
ITGB4-202ENST00000449880 USP25Q9UHP3 1055 aa16.26■□□□□ 0.19
ITGB4-202ENST00000449880 KIF5CO60282 957 aa16.26■□□□□ 0.19
ITGB4-202ENST00000449880 CCDC158Q5M9N0 1113 aa16.26■□□□□ 0.19
ITGB4-202ENST00000449880 CTR9Q6PD62 1173 aa16.26■□□□□ 0.19
ITGB4-202ENST00000449880 MPNDQ8N594 471 aa16.26■□□□□ 0.19
ITGB4-202ENST00000449880 SF3B2Q13435 895 aaKnown RBP16.26■□□□□ 0.19
ITGB4-202ENST00000449880 MTMR7Q9Y216 660 aa16.26■□□□□ 0.19
ITGB4-202ENST00000449880 FAM177BA6PVY3 158 aa16.26■□□□□ 0.19
ITGB4-202ENST00000449880 CCDC150Q8NCX0 1101 aa16.25■□□□□ 0.19
ITGB4-202ENST00000449880 SSH1Q8WYL5 1049 aa16.25■□□□□ 0.19
ITGB4-202ENST00000449880 ZFYVE27Q5T4F4 411 aa16.25■□□□□ 0.19
ITGB4-202ENST00000449880 CNNM1Q9NRU3 951 aa16.25■□□□□ 0.19
ITGB4-202ENST00000449880 CDK5RAP3Q96JB5 506 aa16.25■□□□□ 0.19
ITGB4-202ENST00000449880 JAKMIP1Q96N16 626 aaKnown RBP16.25■□□□□ 0.19
ITGB4-202ENST00000449880 GNAT3A8MTJ3 354 aa16.25■□□□□ 0.19
ITGB4-202ENST00000449880 CEBPAP49715 358 aaPredicted RBP16.25■□□□□ 0.19
ITGB4-202ENST00000449880 FEZ1Q99689 392 aa16.25■□□□□ 0.19
ITGB4-202ENST00000449880 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.25■□□□□ 0.19
ITGB4-202ENST00000449880 STRN4Q9NRL3 753 aa16.24■□□□□ 0.19
ITGB4-202ENST00000449880 CEBPZQ03701 1054 aaKnown RBP16.24■□□□□ 0.19
ITGB4-202ENST00000449880 TNRQ92752 1358 aa16.24■□□□□ 0.19
ITGB4-202ENST00000449880 RAB11FIP3O75154 756 aa16.24■□□□□ 0.19
ITGB4-202ENST00000449880 UBE2HP62256 183 aa16.23■□□□□ 0.19
ITGB4-202ENST00000449880 CEP135Q66GS9 1140 aa16.23■□□□□ 0.19
ITGB4-202ENST00000449880 MCM10Q7L590 875 aa16.23■□□□□ 0.19
ITGB4-202ENST00000449880 ATP7AQ04656 1500 aa16.23■□□□□ 0.19
ITGB4-202ENST00000449880 NOLC1Q14978 699 aaKnown RBP eCLIP16.23■□□□□ 0.19
ITGB4-202ENST00000449880 TRIM22Q8IYM9 498 aa16.23■□□□□ 0.19
ITGB4-202ENST00000449880 KCNH5Q8NCM2 988 aa16.23■□□□□ 0.19
ITGB4-202ENST00000449880 TMEM132AQ24JP5 1023 aa16.23■□□□□ 0.19
ITGB4-202ENST00000449880 BRPF1P55201 1214 aaPredicted RBP16.23■□□□□ 0.19
ITGB4-202ENST00000449880 CFAP100Q494V2 611 aa16.23■□□□□ 0.19
ITGB4-202ENST00000449880 WASF1Q92558 559 aa16.23■□□□□ 0.19
ITGB4-202ENST00000449880 ARHGEF5Q12774 1597 aa16.23■□□□□ 0.19
ITGB4-202ENST00000449880 GTF2F1P35269 517 aaKnown RBP eCLIP16.22■□□□□ 0.19
ITGB4-202ENST00000449880 STX1AQ16623 288 aa16.22■□□□□ 0.19
ITGB4-202ENST00000449880 TTC39AQ5SRH9 613 aa16.22■□□□□ 0.19
ITGB4-202ENST00000449880 ANKRD18AQ8IVF6 992 aa16.22■□□□□ 0.19
ITGB4-202ENST00000449880 SPG7Q9UQ90 795 aa16.22■□□□□ 0.19
ITGB4-202ENST00000449880 COL17A1Q9UMD9 1497 aaPredicted RBP16.22■□□□□ 0.19
ITGB4-202ENST00000449880 HMGB2P26583 209 aaKnown RBP16.22■□□□□ 0.19
ITGB4-202ENST00000449880 NOL7Q9UMY1 257 aaKnown RBP16.22■□□□□ 0.19
ITGB4-202ENST00000449880 URI1O94763 535 aaPredicted RBP16.22■□□□□ 0.19
ITGB4-202ENST00000449880 FAM177A1Q8N128 213 aaPredicted RBP16.22■□□□□ 0.19
ITGB4-202ENST00000449880 NACAP1Q9BZK3 213 aa16.22■□□□□ 0.19
ITGB4-202ENST00000449880 CABP4P57796 275 aa16.22■□□□□ 0.19
ITGB4-202ENST00000449880 IMMTQ16891 758 aaKnown RBP16.22■□□□□ 0.19
ITGB4-202ENST00000449880 C16orf45Q96MC5 204 aaPredicted RBP16.21■□□□□ 0.19
ITGB4-202ENST00000449880 CTNNA3Q9UI47 895 aa16.21■□□□□ 0.19
ITGB4-202ENST00000449880 CEP131Q9UPN4 1083 aa16.21■□□□□ 0.19
ITGB4-202ENST00000449880 KIF20AO95235 890 aa16.21■□□□□ 0.19
ITGB4-202ENST00000449880 SRRTQ9BXP5 876 aaKnown RBP16.21■□□□□ 0.19
ITGB4-202ENST00000449880 SNW1Q13573 536 aaKnown RBP16.21■□□□□ 0.19
ITGB4-202ENST00000449880 ABCA8O94911 1581 aa16.21■□□□□ 0.19
ITGB4-202ENST00000449880 BTBD11A6QL63 1104 aa16.21■□□□□ 0.18
ITGB4-202ENST00000449880 TUBB4BP68371 445 aa16.21■□□□□ 0.18
ITGB4-202ENST00000449880 TOP1P11387 765 aaKnown RBP16.2■□□□□ 0.18
ITGB4-202ENST00000449880 MIS18AQ9NYP9 233 aa16.2■□□□□ 0.18
ITGB4-202ENST00000449880 TOM1L2Q6ZVM7 507 aa16.2■□□□□ 0.18
ITGB4-202ENST00000449880 LIMCH1Q9UPQ0 1083 aa16.2■□□□□ 0.18
ITGB4-202ENST00000449880 HDAC1Q13547 482 aaPredicted RBP16.2■□□□□ 0.18
ITGB4-202ENST00000449880 ATP2B1P20020 1258 aa16.19■□□□□ 0.18
ITGB4-202ENST00000449880 CASTP20810 708 aaKnown RBP16.19■□□□□ 0.18
ITGB4-202ENST00000449880 FAM193AP78312 1265 aa16.19■□□□□ 0.18
ITGB4-202ENST00000449880 OGFRQ9NZT2 677 aa16.19■□□□□ 0.18
ITGB4-202ENST00000449880 FBXO3Q9UK99 471 aa16.19■□□□□ 0.18
ITGB4-202ENST00000449880 RIMS2Q9UQ26 1411 aa16.19■□□□□ 0.18
ITGB4-202ENST00000449880 KRT18P05783 430 aaKnown RBP16.19■□□□□ 0.18
ITGB4-202ENST00000449880 PUS7Q96PZ0 661 aaKnown RBP16.19■□□□□ 0.18
ITGB4-202ENST00000449880 UHRF1BP1LA0JNW5 1464 aa16.19■□□□□ 0.18
ITGB4-202ENST00000449880 MX1P20591 662 aa16.19■□□□□ 0.18
ITGB4-202ENST00000449880 KIAA1328Q86T90 577 aa16.19■□□□□ 0.18
ITGB4-202ENST00000449880 PLCD4Q9BRC7 762 aa16.19■□□□□ 0.18
ITGB4-202ENST00000449880 C8orf34Q49A92 452 aa16.19■□□□□ 0.18
ITGB4-202ENST00000449880 CENPHQ9H3R5 247 aa16.19■□□□□ 0.18
ITGB4-202ENST00000449880 GTF2A1P52655 376 aaPredicted RBP16.19■□□□□ 0.18
ITGB4-202ENST00000449880 STK3Q13188 491 aa16.19■□□□□ 0.18
ITGB4-202ENST00000449880 GOLGA6L10A0A0M3HER8 536 aa16.18■□□□□ 0.18
ITGB4-202ENST00000449880 ZSCAN25Q6NSZ9 544 aa16.18■□□□□ 0.18
ITGB4-202ENST00000449880 ZNF397Q8NF99 534 aaPredicted RBP16.18■□□□□ 0.18
ITGB4-202ENST00000449880 IL16Q14005 1332 aa16.18■□□□□ 0.18
ITGB4-202ENST00000449880 POLR3AO14802 1390 aaPredicted RBP16.18■□□□□ 0.18
ITGB4-202ENST00000449880 SYCP1Q15431 976 aa16.18■□□□□ 0.18
ITGB4-202ENST00000449880 SMARCC1Q92922 1105 aaPredicted RBP16.18■□□□□ 0.18
ITGB4-202ENST00000449880 POLR3GO15318 223 aaPredicted RBP16.18■□□□□ 0.18
ITGB4-202ENST00000449880 SMC5Q8IY18 1101 aa16.17■□□□□ 0.18
ITGB4-202ENST00000449880 BBXQ8WY36 941 aaPredicted RBP16.17■□□□□ 0.18
ITGB4-202ENST00000449880 TAF4BQ92750 862 aa16.17■□□□□ 0.18
ITGB4-202ENST00000449880 PHF8Q9UPP1 1060 aa16.17■□□□□ 0.18
ITGB4-202ENST00000449880 TTC21BQ7Z4L5 1316 aa16.17■□□□□ 0.18
ITGB4-202ENST00000449880 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.17■□□□□ 0.18
ITGB4-202ENST00000449880 SPDYE4A6NLX3 237 aa16.17■□□□□ 0.18
ITGB4-202ENST00000449880 PER1O15534 1290 aaPredicted RBP16.17■□□□□ 0.18
ITGB4-202ENST00000449880 CAMK4Q16566 473 aa16.17■□□□□ 0.18
ITGB4-202ENST00000449880 PIK3C2GO75747 1445 aa16.17■□□□□ 0.18
ITGB4-202ENST00000449880 KIF4BQ2VIQ3 1234 aa16.17■□□□□ 0.18
ITGB4-202ENST00000449880 ACEP12821 1306 aa16.17■□□□□ 0.18
ITGB4-202ENST00000449880 GLRX3O76003 335 aaKnown RBP16.17■□□□□ 0.18
ITGB4-202ENST00000449880 HMGB1P09429 215 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms