RNA–Protein interactions for RNA: ENST00000449784.5

COPS7B-214, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-214ENST00000449784 PHLPP1O60346 1717 aa13.09□□□□□ -0.31
COPS7B-214ENST00000449784 PXDNQ92626 1479 aa13.09□□□□□ -0.31
COPS7B-214ENST00000449784 TOPAZ1Q8N9V7 1692 aa13.08□□□□□ -0.31
COPS7B-214ENST00000449784 FOXO3O43524 673 aa13.08□□□□□ -0.32
COPS7B-214ENST00000449784 SLC24A1O60721 1099 aa13.08□□□□□ -0.32
COPS7B-214ENST00000449784 SRPK2P78362 688 aaKnown RBP13.08□□□□□ -0.32
COPS7B-214ENST00000449784 MSS51Q4VC12 460 aa13.08□□□□□ -0.32
COPS7B-214ENST00000449784 DDX17Q92841 729 aaKnown RBP13.08□□□□□ -0.32
COPS7B-214ENST00000449784 IRF6O14896 467 aa13.07□□□□□ -0.32
COPS7B-214ENST00000449784 LMOD2Q6P5Q4 547 aa13.07□□□□□ -0.32
COPS7B-214ENST00000449784 ITSN1Q15811 1721 aa13.07□□□□□ -0.32
COPS7B-214ENST00000449784 POLR3AO14802 1390 aaPredicted RBP13.07□□□□□ -0.32
COPS7B-214ENST00000449784 ATAD2Q6PL18 1390 aa13.07□□□□□ -0.32
COPS7B-214ENST00000449784 JCADQ9P266 1359 aa13.07□□□□□ -0.32
COPS7B-214ENST00000449784 PLEKHG3A1L390 1219 aa13.06□□□□□ -0.32
COPS7B-214ENST00000449784 KDM4AO75164 1064 aa13.06□□□□□ -0.32
COPS7B-214ENST00000449784 Q3C1V9 767 aa13.06□□□□□ -0.32
COPS7B-214ENST00000449784 PUS7Q96PZ0 661 aaKnown RBP13.06□□□□□ -0.32
COPS7B-214ENST00000449784 RGPD8O14715 1765 aaPredicted RBP13.06□□□□□ -0.32
COPS7B-214ENST00000449784 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
COPS7B-214ENST00000449784 EIF4G2P78344 907 aaKnown RBP eCLIP13.05□□□□□ -0.32
COPS7B-214ENST00000449784 PMFBP1Q8TBY8 1022 aa13.05□□□□□ -0.32
COPS7B-214ENST00000449784 LRRC59Q96AG4 307 aaKnown RBP13.05□□□□□ -0.32
COPS7B-214ENST00000449784 TOR4AQ9NXH8 423 aa13.05□□□□□ -0.32
COPS7B-214ENST00000449784 DACH1Q9UI36 760 aa13.05□□□□□ -0.32
COPS7B-214ENST00000449784 TTC24A2A3L6 582 aaPredicted RBP13.04□□□□□ -0.32
COPS7B-214ENST00000449784 CCDC102AQ96A19 550 aa13.04□□□□□ -0.32
COPS7B-214ENST00000449784 DISP3Q9P2K9 1392 aa13.04□□□□□ -0.32
COPS7B-214ENST00000449784 HSPA5P11021 654 aaKnown RBP13.03□□□□□ -0.32
COPS7B-214ENST00000449784 XPCQ01831 940 aaPredicted RBP13.03□□□□□ -0.32
COPS7B-214ENST00000449784 SBNO1A3KN83 1393 aa13.03□□□□□ -0.32
COPS7B-214ENST00000449784 PNPLA6Q8IY17 1366 aa13.03□□□□□ -0.32
COPS7B-214ENST00000449784 SHPRHQ149N8 1683 aa13.02□□□□□ -0.32
COPS7B-214ENST00000449784 TMF1P82094 1093 aa13.02□□□□□ -0.33
COPS7B-214ENST00000449784 GUCA2AQ02747 115 aa13.02□□□□□ -0.33
COPS7B-214ENST00000449784 KRT28Q7Z3Y7 464 aa13.02□□□□□ -0.33
COPS7B-214ENST00000449784 CCDC24Q8N4L8 307 aa13.02□□□□□ -0.33
COPS7B-214ENST00000449784 NGDNQ8NEJ9 315 aaKnown RBP13.02□□□□□ -0.33
COPS7B-214ENST00000449784 CABP1Q9NZU7 370 aa13.02□□□□□ -0.33
COPS7B-214ENST00000449784 ACEP12821 1306 aa13.02□□□□□ -0.33
COPS7B-214ENST00000449784 TNS3Q68CZ2 1445 aa13.02□□□□□ -0.33
COPS7B-214ENST00000449784 PSME1Q06323 249 aa13.01□□□□□ -0.33
COPS7B-214ENST00000449784 USB1Q9BQ65 265 aaKnown RBP13.01□□□□□ -0.33
COPS7B-214ENST00000449784 SPATA31A3Q5VYP0 1347 aa13.01□□□□□ -0.33
COPS7B-214ENST00000449784 NINLQ9Y2I6 1382 aa13□□□□□ -0.33
COPS7B-214ENST00000449784 SPATA31A6Q5VVP1 1343 aa13□□□□□ -0.33
COPS7B-214ENST00000449784 TRIM32Q13049 653 aa13□□□□□ -0.33
COPS7B-214ENST00000449784 CDCA8Q53HL2 280 aa13□□□□□ -0.33
COPS7B-214ENST00000449784 TRPM3Q9HCF6 1732 aaPredicted RBP12.99□□□□□ -0.33
COPS7B-214ENST00000449784 CPSF1Q10570 1443 aaKnown RBP12.99□□□□□ -0.33
COPS7B-214ENST00000449784 BRD4O60885 1362 aaPredicted RBP12.99□□□□□ -0.33
COPS7B-214ENST00000449784 AXIN1O15169 862 aa12.99□□□□□ -0.33
COPS7B-214ENST00000449784 VSIG10Q8N0Z9 540 aa12.99□□□□□ -0.33
COPS7B-214ENST00000449784 COL22A1Q8NFW1 1626 aaPredicted RBP12.99□□□□□ -0.33
COPS7B-214ENST00000449784 CD163L1Q9NR16 1453 aa12.98□□□□□ -0.33
COPS7B-214ENST00000449784 USP6P35125 1406 aa12.98□□□□□ -0.33
COPS7B-214ENST00000449784 ARHGEF10O15013 1369 aa12.98□□□□□ -0.33
COPS7B-214ENST00000449784 MMP16P51512 607 aa12.98□□□□□ -0.33
COPS7B-214ENST00000449784 SSH2Q76I76 1423 aa12.97□□□□□ -0.33
COPS7B-214ENST00000449784 HOXA2O43364 376 aa12.97□□□□□ -0.33
COPS7B-214ENST00000449784 SYMPKQ92797 1274 aaKnown RBP12.97□□□□□ -0.33
COPS7B-214ENST00000449784 LRP6O75581 1613 aa12.97□□□□□ -0.33
COPS7B-214ENST00000449784 ALS2Q96Q42 1657 aa12.96□□□□□ -0.33
COPS7B-214ENST00000449784 MED1Q15648 1581 aaPredicted RBP12.96□□□□□ -0.33
COPS7B-214ENST00000449784 KRI1Q8N9T8 703 aaKnown RBP12.96□□□□□ -0.33
COPS7B-214ENST00000449784 SLC12A5Q9H2X9 1139 aa12.96□□□□□ -0.33
COPS7B-214ENST00000449784 GMPR2Q9P2T1 348 aaKnown RBP12.96□□□□□ -0.33
COPS7B-214ENST00000449784 A0A1W2PP64 1363 aa12.95□□□□□ -0.34
COPS7B-214ENST00000449784 DXOO77932 396 aaKnown RBP12.95□□□□□ -0.34
COPS7B-214ENST00000449784 AVPP01185 164 aa12.95□□□□□ -0.34
COPS7B-214ENST00000449784 ZEB1P37275 1124 aaPredicted RBP12.95□□□□□ -0.34
COPS7B-214ENST00000449784 USP46P62068 366 aa12.95□□□□□ -0.34
COPS7B-214ENST00000449784 TMC1Q8TDI8 760 aa12.95□□□□□ -0.34
COPS7B-214ENST00000449784 GPCPD1Q9NPB8 672 aa12.95□□□□□ -0.34
COPS7B-214ENST00000449784 WNT7AO00755 349 aa12.94□□□□□ -0.34
COPS7B-214ENST00000449784 CRIPAKQ8N1N5 446 aa12.94□□□□□ -0.34
COPS7B-214ENST00000449784 MRGPRX2Q96LB1 330 aa12.94□□□□□ -0.34
COPS7B-214ENST00000449784 TERF2IPQ9NYB0 399 aa12.94□□□□□ -0.34
COPS7B-214ENST00000449784 AKAP12Q02952 1782 aa12.94□□□□□ -0.34
COPS7B-214ENST00000449784 NRKQ7Z2Y5 1582 aa12.94□□□□□ -0.34
COPS7B-214ENST00000449784 KTN1Q86UP2 1357 aaKnown RBP12.94□□□□□ -0.34
COPS7B-214ENST00000449784 ANKRD36BQ8N2N9 1353 aa12.94□□□□□ -0.34
COPS7B-214ENST00000449784 HDGFL2Q7Z4V5 671 aaPredicted RBP12.93□□□□□ -0.34
COPS7B-214ENST00000449784 FAM217BQ9NTX9 383 aaPredicted RBP12.93□□□□□ -0.34
COPS7B-214ENST00000449784 MON2Q7Z3U7 1717 aa12.93□□□□□ -0.34
COPS7B-214ENST00000449784 TTC21BQ7Z4L5 1316 aa12.92□□□□□ -0.34
COPS7B-214ENST00000449784 J3QL48 77 aa12.92□□□□□ -0.34
COPS7B-214ENST00000449784 SMPD1P17405 629 aa12.92□□□□□ -0.34
COPS7B-214ENST00000449784 CLCN1P35523 988 aa12.92□□□□□ -0.34
COPS7B-214ENST00000449784 EDC4Q6P2E9 1401 aaKnown RBP12.92□□□□□ -0.34
COPS7B-214ENST00000449784 NUTM1Q86Y26 1132 aa12.92□□□□□ -0.34
COPS7B-214ENST00000449784 SNIP1Q8TAD8 396 aaKnown RBP12.92□□□□□ -0.34
COPS7B-214ENST00000449784 MYOM1P52179 1685 aa12.92□□□□□ -0.34
COPS7B-214ENST00000449784 TTC21AQ8NDW8 1320 aa12.91□□□□□ -0.34
COPS7B-214ENST00000449784 C11orf95C9JLR9 678 aaPredicted RBP12.91□□□□□ -0.34
COPS7B-214ENST00000449784 USP19O94966 1318 aa12.9□□□□□ -0.34
COPS7B-214ENST00000449784 NUTM2BA6NNL0 878 aaPredicted RBP12.9□□□□□ -0.34
COPS7B-214ENST00000449784 NUTM2EB1AL46 878 aaPredicted RBP12.9□□□□□ -0.34
COPS7B-214ENST00000449784 CTC1Q2NKJ3 1217 aa12.9□□□□□ -0.34
COPS7B-214ENST00000449784 NUTM2AQ8IVF1 878 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms