RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 SBF1O95248 1867 aa10.4□□□□□ -0.74
RBM39-218ENST00000449489 LOC102724428A0A0B4J2F2 783 aa10.4□□□□□ -0.74
RBM39-218ENST00000449489 FCHSD2O94868 740 aa10.4□□□□□ -0.74
RBM39-218ENST00000449489 SIK1P57059 783 aa10.4□□□□□ -0.74
RBM39-218ENST00000449489 SLC12A5Q9H2X9 1139 aa10.4□□□□□ -0.74
RBM39-218ENST00000449489 KCPQ6ZWJ8 1503 aa10.39□□□□□ -0.75
RBM39-218ENST00000449489 CYP27B1O15528 508 aa10.39□□□□□ -0.75
RBM39-218ENST00000449489 KCNA3P22001 575 aa10.39□□□□□ -0.75
RBM39-218ENST00000449489 TMF1P82094 1093 aa10.39□□□□□ -0.75
RBM39-218ENST00000449489 LINC00116Q8NCU8 138 aa10.39□□□□□ -0.75
RBM39-218ENST00000449489 TMC1Q8TDI8 760 aa10.39□□□□□ -0.75
RBM39-218ENST00000449489 PIGBQ92521 554 aa10.39□□□□□ -0.75
RBM39-218ENST00000449489 COG3Q96JB2 828 aa10.39□□□□□ -0.75
RBM39-218ENST00000449489 DCAF5Q96JK2 942 aa10.39□□□□□ -0.75
RBM39-218ENST00000449489 RRAGCQ9HB90 399 aa10.39□□□□□ -0.75
RBM39-218ENST00000449489 CCDC87Q9NVE4 849 aa10.39□□□□□ -0.75
RBM39-218ENST00000449489 A0A1W2PP64 1363 aa10.39□□□□□ -0.75
RBM39-218ENST00000449489 ROCK2O75116 1388 aaKnown RBP10.39□□□□□ -0.75
RBM39-218ENST00000449489 DPEP1P16444 411 aa10.38□□□□□ -0.75
RBM39-218ENST00000449489 L3MBTL2Q969R5 705 aa10.38□□□□□ -0.75
RBM39-218ENST00000449489 PIM2Q9P1W9 311 aa10.38□□□□□ -0.75
RBM39-218ENST00000449489 GNPATO15228 680 aa10.37□□□□□ -0.75
RBM39-218ENST00000449489 VEGFAP15692 232 aaPredicted RBP10.37□□□□□ -0.75
RBM39-218ENST00000449489 TRAPPC3LQ5T215 181 aa10.37□□□□□ -0.75
RBM39-218ENST00000449489 SMIM5Q71RC9 77 aa10.37□□□□□ -0.75
RBM39-218ENST00000449489 SMG6Q86US8 1419 aaKnown RBP10.37□□□□□ -0.75
RBM39-218ENST00000449489 PRDM10Q9NQV6 1147 aa10.37□□□□□ -0.75
RBM39-218ENST00000449489 KIF24Q5T7B8 1368 aa10.37□□□□□ -0.75
RBM39-218ENST00000449489 C4AP0C0L4 1744 aa10.36□□□□□ -0.75
RBM39-218ENST00000449489 GOLGA2Q08379 1002 aa10.36□□□□□ -0.75
RBM39-218ENST00000449489 DALRD3Q5D0E6 543 aaKnown RBP10.36□□□□□ -0.75
RBM39-218ENST00000449489 RC3H1Q5TC82 1133 aaKnown RBP10.36□□□□□ -0.75
RBM39-218ENST00000449489 RNF181Q9P0P0 153 aa10.36□□□□□ -0.75
RBM39-218ENST00000449489 ZNF831Q5JPB2 1677 aa10.36□□□□□ -0.75
RBM39-218ENST00000449489 PDE4DIPQ5VU43 2346 aa10.36□□□□□ -0.75
RBM39-218ENST00000449489 INSRP06213 1382 aa10.36□□□□□ -0.75
RBM39-218ENST00000449489 KDM6AO15550 1401 aaPredicted RBP10.35□□□□□ -0.75
RBM39-218ENST00000449489 ITPK1Q13572 414 aa10.35□□□□□ -0.75
RBM39-218ENST00000449489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.35□□□□□ -0.755e-31■■■□□ 17.2
RBM39-218ENST00000449489 RTCBQ9Y3I0 505 aaKnown RBP10.35□□□□□ -0.75
RBM39-218ENST00000449489 PARP3Q9Y6F1 533 aa10.35□□□□□ -0.75
RBM39-218ENST00000449489 GLTPD2A6NH11 291 aa10.34□□□□□ -0.75
RBM39-218ENST00000449489 GYS1P13807 737 aa10.34□□□□□ -0.75
RBM39-218ENST00000449489 ATP6V1AP38606 617 aa10.34□□□□□ -0.75
RBM39-218ENST00000449489 USHBP1Q8N6Y0 703 aa10.34□□□□□ -0.75
RBM39-218ENST00000449489 MS4A3Q96HJ5 214 aa10.34□□□□□ -0.75
RBM39-218ENST00000449489 NCAPD2Q15021 1401 aa10.33□□□□□ -0.76
RBM39-218ENST00000449489 FBLN1P23142 703 aa10.33□□□□□ -0.76
RBM39-218ENST00000449489 ARHGEF1Q92888 912 aaKnown RBP10.33□□□□□ -0.76
RBM39-218ENST00000449489 TMOD3Q9NYL9 352 aa10.33□□□□□ -0.76
RBM39-218ENST00000449489 ASAP1Q9ULH1 1129 aa10.33□□□□□ -0.76
RBM39-218ENST00000449489 RPS6KA4O75676 772 aa10.32□□□□□ -0.76
RBM39-218ENST00000449489 NBR1Q14596 966 aa10.32□□□□□ -0.76
RBM39-218ENST00000449489 MFRPQ9BY79 579 aa10.32□□□□□ -0.76
RBM39-218ENST00000449489 ATG3Q9NT62 314 aa10.32□□□□□ -0.76
RBM39-218ENST00000449489 SPG7Q9UQ90 795 aa10.32□□□□□ -0.76
RBM39-218ENST00000449489 CNTNAP4Q9C0A0 1308 aa10.32□□□□□ -0.76
RBM39-218ENST00000449489 FLT4P35916 1363 aa10.31□□□□□ -0.76
RBM39-218ENST00000449489 KDRP35968 1356 aa10.31□□□□□ -0.76
RBM39-218ENST00000449489 LMNB1P20700 586 aa10.31□□□□□ -0.76
RBM39-218ENST00000449489 RFC4P35249 363 aa10.31□□□□□ -0.76
RBM39-218ENST00000449489 RRS1Q15050 365 aaKnown RBP10.31□□□□□ -0.76
RBM39-218ENST00000449489 HSP90AB2PQ58FF8 381 aa10.31□□□□□ -0.76
RBM39-218ENST00000449489 MYH14Q7Z406 1995 aaKnown RBP10.3□□□□□ -0.76
RBM39-218ENST00000449489 TNRC18O15417 2968 aaPredicted RBP10.3□□□□□ -0.76
RBM39-218ENST00000449489 TONSLQ96HA7 1378 aa10.3□□□□□ -0.76
RBM39-218ENST00000449489 FYB1O15117 783 aa10.3□□□□□ -0.76
RBM39-218ENST00000449489 EFCAB3Q8N7B9 438 aa10.3□□□□□ -0.76
RBM39-218ENST00000449489 COL5A3P25940 1745 aaPredicted RBP10.3□□□□□ -0.76
RBM39-218ENST00000449489 FOXN1O15353 648 aa10.29□□□□□ -0.76
RBM39-218ENST00000449489 CTCFP49711 727 aaPredicted RBP10.29□□□□□ -0.76
RBM39-218ENST00000449489 ASTLQ6HA08 431 aaPredicted RBP10.29□□□□□ -0.76
RBM39-218ENST00000449489 IFNL2Q8IZJ0 200 aa10.29□□□□□ -0.76
RBM39-218ENST00000449489 WDR70Q9NW82 654 aa10.29□□□□□ -0.76
RBM39-218ENST00000449489 POTECB2RU33 542 aa10.28□□□□□ -0.76
RBM39-218ENST00000449489 TIE1P35590 1138 aa10.28□□□□□ -0.76
RBM39-218ENST00000449489 RGS19P49795 217 aa10.28□□□□□ -0.76
RBM39-218ENST00000449489 SLC4A9Q96Q91 983 aa10.28□□□□□ -0.76
RBM39-218ENST00000449489 TMEM106CQ9BVX2 250 aa10.28□□□□□ -0.76
RBM39-218ENST00000449489 CARD11Q9BXL7 1154 aa10.28□□□□□ -0.76
RBM39-218ENST00000449489 CCDC88AQ3V6T2 1871 aa10.27□□□□□ -0.76
RBM39-218ENST00000449489 CNTNAP1P78357 1384 aa10.27□□□□□ -0.76
RBM39-218ENST00000449489 ERVV-2B6SEH9 535 aa10.27□□□□□ -0.77
RBM39-218ENST00000449489 ATMINO43313 823 aaPredicted RBP10.27□□□□□ -0.77
RBM39-218ENST00000449489 C7P10643 843 aa10.27□□□□□ -0.77
RBM39-218ENST00000449489 PHKG2P15735 406 aa10.27□□□□□ -0.77
RBM39-218ENST00000449489 TM4SF1P30408 202 aa10.27□□□□□ -0.77
RBM39-218ENST00000449489 DPY19L2Q6NUT2 758 aa10.27□□□□□ -0.77
RBM39-218ENST00000449489 SLC39A7Q92504 469 aa10.27□□□□□ -0.77
RBM39-218ENST00000449489 OTUD5Q96G74 571 aa10.27□□□□□ -0.77
RBM39-218ENST00000449489 POTEB2H3BUK9 544 aa10.26□□□□□ -0.77
RBM39-218ENST00000449489 CHRNA5P30532 468 aa10.26□□□□□ -0.77
RBM39-218ENST00000449489 DDR1Q08345 913 aa10.26□□□□□ -0.77
RBM39-218ENST00000449489 MKRN3Q13064 507 aaKnown RBP10.26□□□□□ -0.77
RBM39-218ENST00000449489 FBXO22Q8NEZ5 403 aa10.26□□□□□ -0.77
RBM39-218ENST00000449489 AIDAQ96BJ3 306 aa10.26□□□□□ -0.77
RBM39-218ENST00000449489 WBP1LQ9NX94 342 aa10.26□□□□□ -0.77
RBM39-218ENST00000449489 METRNQ9UJH8 293 aa10.26□□□□□ -0.77
RBM39-218ENST00000449489 DICER1Q9UPY3 1922 aaKnown RBP10.26□□□□□ -0.77
RBM39-218ENST00000449489 USP42Q9H9J4 1324 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms