RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 FKBP8Q14318 412 aa18.64■□□□□ 0.57
RTFDC1-204ENST00000449062 KLHL34Q8N239 644 aa18.64■□□□□ 0.57
RTFDC1-204ENST00000449062 MIS18AQ9NYP9 233 aa18.64■□□□□ 0.57
RTFDC1-204ENST00000449062 ADAMTS8Q9UP79 889 aa18.64■□□□□ 0.57
RTFDC1-204ENST00000449062 USP16Q9Y5T5 823 aa18.64■□□□□ 0.57
RTFDC1-204ENST00000449062 DCAF8L1A6NGE4 600 aa18.63■□□□□ 0.57
RTFDC1-204ENST00000449062 NEFMP07197 916 aa18.63■□□□□ 0.57
RTFDC1-204ENST00000449062 BCL2L12Q9HB09 334 aa18.63■□□□□ 0.57
RTFDC1-204ENST00000449062 NARFQ9UHQ1 456 aa18.63■□□□□ 0.57
RTFDC1-204ENST00000449062 PRAMEF22A3QJZ6 481 aa18.62■□□□□ 0.57
RTFDC1-204ENST00000449062 A1BGP04217 495 aa18.62■□□□□ 0.57
RTFDC1-204ENST00000449062 TMPOP42166 694 aaKnown RBP18.62■□□□□ 0.57
RTFDC1-204ENST00000449062 THUMPD2Q9BTF0 503 aaKnown RBP18.62■□□□□ 0.57
RTFDC1-204ENST00000449062 CANXP27824 592 aaKnown RBP18.61■□□□□ 0.57
RTFDC1-204ENST00000449062 MAPK8IP3Q9UPT6 1336 aa18.6■□□□□ 0.57
RTFDC1-204ENST00000449062 SNRPA1P09661 255 aaKnown RBP18.6■□□□□ 0.57
RTFDC1-204ENST00000449062 RIPK4P57078 832 aa18.6■□□□□ 0.57
RTFDC1-204ENST00000449062 DDR1Q08345 913 aa18.6■□□□□ 0.57
RTFDC1-204ENST00000449062 USPL1Q5W0Q7 1092 aa18.6■□□□□ 0.57
RTFDC1-204ENST00000449062 YBX3P16989 372 aaKnown RBP eCLIP18.59■□□□□ 0.571e-6■■■□□ 15.1
RTFDC1-204ENST00000449062 IL6STP40189 918 aaPredicted RBP18.59■□□□□ 0.57
RTFDC1-204ENST00000449062 PNISRQ8TF01 805 aaKnown RBP18.59■□□□□ 0.57
RTFDC1-204ENST00000449062 COL15A1P39059 1388 aa18.58■□□□□ 0.57
RTFDC1-204ENST00000449062 ZPR1O75312 459 aa18.58■□□□□ 0.56
RTFDC1-204ENST00000449062 EIF4A1P60842 406 aaKnown RBP18.58■□□□□ 0.56
RTFDC1-204ENST00000449062 GPR162Q16538 588 aa18.58■□□□□ 0.56
RTFDC1-204ENST00000449062 CCDC184Q52MB2 194 aa18.58■□□□□ 0.56
RTFDC1-204ENST00000449062 CCDC146Q8IYE0 955 aa18.58■□□□□ 0.56
RTFDC1-204ENST00000449062 RUNDC1Q96C34 613 aa18.58■□□□□ 0.56
RTFDC1-204ENST00000449062 POLRMTO00411 1230 aaKnown RBP18.57■□□□□ 0.56
RTFDC1-204ENST00000449062 TRIM35Q9UPQ4 493 aa18.57■□□□□ 0.56
RTFDC1-204ENST00000449062 PARP3Q9Y6F1 533 aa18.57■□□□□ 0.56
RTFDC1-204ENST00000449062 C4AP0C0L4 1744 aa18.57■□□□□ 0.56
RTFDC1-204ENST00000449062 A0A087WZG4 1122 aa18.56■□□□□ 0.56
RTFDC1-204ENST00000449062 NBPF26B4DH59 902 aa18.56■□□□□ 0.56
RTFDC1-204ENST00000449062 GIGYF1O75420 1035 aaPredicted RBP18.56■□□□□ 0.56
RTFDC1-204ENST00000449062 NFIXQ14938 502 aa18.56■□□□□ 0.56
RTFDC1-204ENST00000449062 WDR43Q15061 677 aaKnown RBP eCLIP18.56■□□□□ 0.56
RTFDC1-204ENST00000449062 NBPF10Q6P3W6 841 aaKnown RBP18.56■□□□□ 0.56
RTFDC1-204ENST00000449062 NBPF15Q8N660 670 aa18.56■□□□□ 0.56
RTFDC1-204ENST00000449062 RRP7AQ9Y3A4 280 aaKnown RBP18.56■□□□□ 0.56
RTFDC1-204ENST00000449062 DLG5Q8TDM6 1919 aa18.56■□□□□ 0.56
RTFDC1-204ENST00000449062 TGFB2P61812 414 aa18.55■□□□□ 0.56
RTFDC1-204ENST00000449062 YY1P25490 414 aa18.54■□□□□ 0.56
RTFDC1-204ENST00000449062 BABAM1Q9NWV8 329 aa18.54■□□□□ 0.56
RTFDC1-204ENST00000449062 TBC1D2BQ9UPU7 963 aa18.54■□□□□ 0.56
RTFDC1-204ENST00000449062 C10orf71Q711Q0 1435 aa18.54■□□□□ 0.56
RTFDC1-204ENST00000449062 CAMTA2O94983 1202 aa18.53■□□□□ 0.56
RTFDC1-204ENST00000449062 KCNA3P22001 575 aa18.53■□□□□ 0.56
RTFDC1-204ENST00000449062 PIP4K2AP48426 406 aaPredicted RBP18.53■□□□□ 0.56
RTFDC1-204ENST00000449062 A0A0G2JLW4 131 aa18.52■□□□□ 0.56
RTFDC1-204ENST00000449062 CHL1O00533 1208 aa18.52■□□□□ 0.56
RTFDC1-204ENST00000449062 GRIN3BO60391 1043 aa18.52■□□□□ 0.56
RTFDC1-204ENST00000449062 DPEP1P16444 411 aa18.51■□□□□ 0.55
RTFDC1-204ENST00000449062 LMOD3Q0VAK6 560 aa18.51■□□□□ 0.55
RTFDC1-204ENST00000449062 NEUROD2Q15784 382 aa18.51■□□□□ 0.55
RTFDC1-204ENST00000449062 PELP1Q8IZL8 1130 aaKnown RBP18.51■□□□□ 0.55
RTFDC1-204ENST00000449062 PXDNLA1KZ92 1463 aa18.51■□□□□ 0.55
RTFDC1-204ENST00000449062 TBC1D9BQ66K14 1250 aa18.5■□□□□ 0.55
RTFDC1-204ENST00000449062 KIF13BQ9NQT8 1826 aa18.49■□□□□ 0.55
RTFDC1-204ENST00000449062 SERPINB2P05120 415 aa18.49■□□□□ 0.55
RTFDC1-204ENST00000449062 TSPYL4Q9UJ04 414 aa18.49■□□□□ 0.55
RTFDC1-204ENST00000449062 APAF1O14727 1248 aa18.48■□□□□ 0.55
RTFDC1-204ENST00000449062 DZIP3Q86Y13 1208 aaKnown RBP18.48■□□□□ 0.55
RTFDC1-204ENST00000449062 ZNF330Q9Y3S2 320 aaPredicted RBP18.48■□□□□ 0.55
RTFDC1-204ENST00000449062 KDM3BQ7LBC6 1761 aa18.47■□□□□ 0.55
RTFDC1-204ENST00000449062 KIAA1551Q9HCM1 1747 aa18.47■□□□□ 0.55
RTFDC1-204ENST00000449062 RGL2O15211 777 aa18.47■□□□□ 0.55
RTFDC1-204ENST00000449062 CLEC4GQ6UXB4 293 aa18.47■□□□□ 0.55
RTFDC1-204ENST00000449062 ZNF853P0CG23 659 aa18.46■□□□□ 0.55
RTFDC1-204ENST00000449062 PDIA6Q15084 440 aa18.46■□□□□ 0.55
RTFDC1-204ENST00000449062 LRP10Q7Z4F1 713 aa18.46■□□□□ 0.55
RTFDC1-204ENST00000449062 WWC3Q9ULE0 1092 aa18.46■□□□□ 0.55
RTFDC1-204ENST00000449062 BICDL1Q6ZP65 573 aa18.45■□□□□ 0.54
RTFDC1-204ENST00000449062 ANP32CO43423 234 aa18.44■□□□□ 0.54
RTFDC1-204ENST00000449062 CHRNA5P30532 468 aa18.44■□□□□ 0.54
RTFDC1-204ENST00000449062 HLFQ16534 295 aa18.43■□□□□ 0.54
RTFDC1-204ENST00000449062 NPM2Q86SE8 214 aaKnown RBP18.43■□□□□ 0.54
RTFDC1-204ENST00000449062 ZNF784Q8NCA9 323 aaPredicted RBP18.43■□□□□ 0.54
RTFDC1-204ENST00000449062 CFAP44Q96MT7 982 aa18.43■□□□□ 0.54
RTFDC1-204ENST00000449062 PIM2Q9P1W9 311 aa18.43■□□□□ 0.54
RTFDC1-204ENST00000449062 NRXN2Q9P2S2 1712 aa18.43■□□□□ 0.54
RTFDC1-204ENST00000449062 KRT24Q2M2I5 525 aa18.42■□□□□ 0.54
RTFDC1-204ENST00000449062 PRR5LQ6MZQ0 368 aa18.42■□□□□ 0.54
RTFDC1-204ENST00000449062 TTLL7Q6ZT98 887 aa18.42■□□□□ 0.54
RTFDC1-204ENST00000449062 SETDB2Q96T68 719 aa18.42■□□□□ 0.54
RTFDC1-204ENST00000449062 ERBB4Q15303 1308 aa18.42■□□□□ 0.54
RTFDC1-204ENST00000449062 CHD4Q14839 1912 aa18.41■□□□□ 0.54
RTFDC1-204ENST00000449062 ERVV-1B6SEH8 477 aa18.41■□□□□ 0.54
RTFDC1-204ENST00000449062 BRIP1Q9BX63 1249 aa18.41■□□□□ 0.54
RTFDC1-204ENST00000449062 BCS1LQ9Y276 419 aa18.41■□□□□ 0.54
RTFDC1-204ENST00000449062 CARMIL3Q8ND23 1372 aa18.41■□□□□ 0.54
RTFDC1-204ENST00000449062 MRS2Q9HD23 443 aa18.4■□□□□ 0.54
RTFDC1-204ENST00000449062 N4BP2Q86UW6 1770 aaPredicted RBP18.4■□□□□ 0.54
RTFDC1-204ENST00000449062 AFDNP55196 1824 aaKnown RBP18.39■□□□□ 0.54
RTFDC1-204ENST00000449062 EIF2S2P20042 333 aaKnown RBP18.39■□□□□ 0.53
RTFDC1-204ENST00000449062 PROSER3Q2NL68 480 aa18.39■□□□□ 0.53
RTFDC1-204ENST00000449062 NGEFQ8N5V2 710 aa18.39■□□□□ 0.53
RTFDC1-204ENST00000449062 MBIPQ9NS73 344 aa18.39■□□□□ 0.53
RTFDC1-204ENST00000449062 LAS1LQ9Y4W2 734 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms