RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 CCDC27Q2M243 656 aa14.15□□□□□ -0.14
HDAC6-211ENST00000443563 COL23A1Q86Y22 540 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-211ENST00000443563 PDGFDQ9GZP0 370 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-211ENST00000443563 MIS18AQ9NYP9 233 aa14.15□□□□□ -0.14
HDAC6-211ENST00000443563 COL24A1Q17RW2 1714 aa14.15□□□□□ -0.14
HDAC6-211ENST00000443563 POLD1P28340 1107 aa14.13□□□□□ -0.15
HDAC6-211ENST00000443563 RFC4P35249 363 aa14.13□□□□□ -0.15
HDAC6-211ENST00000443563 EIF4A1P60842 406 aaKnown RBP14.13□□□□□ -0.15
HDAC6-211ENST00000443563 GNAI1P63096 354 aa14.13□□□□□ -0.15
HDAC6-211ENST00000443563 INTS5Q6P9B9 1019 aaKnown RBP14.13□□□□□ -0.15
HDAC6-211ENST00000443563 NPM2Q86SE8 214 aaKnown RBP14.13□□□□□ -0.15
HDAC6-211ENST00000443563 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
HDAC6-211ENST00000443563 ATF5Q9Y2D1 282 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-211ENST00000443563 LAS1LQ9Y4W2 734 aaKnown RBP14.13□□□□□ -0.15
HDAC6-211ENST00000443563 C4AP0C0L4 1744 aa14.12□□□□□ -0.15
HDAC6-211ENST00000443563 CHL1O00533 1208 aa14.12□□□□□ -0.15
HDAC6-211ENST00000443563 IFT57Q9NWB7 429 aa14.12□□□□□ -0.15
HDAC6-211ENST00000443563 PPP1R1BQ9UD71 204 aaPredicted RBP14.12□□□□□ -0.15
HDAC6-211ENST00000443563 GIGYF1O75420 1035 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-211ENST00000443563 ARHGEF1Q92888 912 aaKnown RBP14.11□□□□□ -0.15
HDAC6-211ENST00000443563 ZBTB1Q9Y2K1 713 aa14.11□□□□□ -0.15
HDAC6-211ENST00000443563 SOS1Q07889 1333 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-211ENST00000443563 A0A087WZG4 1122 aa14.1□□□□□ -0.15
HDAC6-211ENST00000443563 CANXP27824 592 aaKnown RBP14.1□□□□□ -0.15
HDAC6-211ENST00000443563 IL6STP40189 918 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-211ENST00000443563 AMIGO3Q86WK7 504 aa14.1□□□□□ -0.15
HDAC6-211ENST00000443563 WWC1Q8IX03 1113 aa14.1□□□□□ -0.15
HDAC6-211ENST00000443563 MIER1Q8N108 512 aa14.1□□□□□ -0.15
HDAC6-211ENST00000443563 USP16Q9Y5T5 823 aa14.1□□□□□ -0.15
HDAC6-211ENST00000443563 IL16Q14005 1332 aa14.1□□□□□ -0.15
HDAC6-211ENST00000443563 COL15A1P39059 1388 aa14.09□□□□□ -0.15
HDAC6-211ENST00000443563 ZPR1O75312 459 aa14.09□□□□□ -0.15
HDAC6-211ENST00000443563 ZNF853P0CG23 659 aa14.09□□□□□ -0.15
HDAC6-211ENST00000443563 PTGER2P43116 358 aa14.09□□□□□ -0.15
HDAC6-211ENST00000443563 WDR63Q8IWG1 891 aa14.09□□□□□ -0.15
HDAC6-211ENST00000443563 NLGN1Q8N2Q7 840 aa14.09□□□□□ -0.15
HDAC6-211ENST00000443563 A1BGP04217 495 aa14.08□□□□□ -0.16
HDAC6-211ENST00000443563 EIF5P55010 431 aaKnown RBP14.08□□□□□ -0.16
HDAC6-211ENST00000443563 SMIM5Q71RC9 77 aa14.08□□□□□ -0.16
HDAC6-211ENST00000443563 SGIP1Q9BQI5 828 aa14.08□□□□□ -0.16
HDAC6-211ENST00000443563 PRAMEF22A3QJZ6 481 aa14.07□□□□□ -0.16
HDAC6-211ENST00000443563 HOXB7P09629 217 aa14.07□□□□□ -0.16
HDAC6-211ENST00000443563 ARXQ96QS3 562 aa14.07□□□□□ -0.16
HDAC6-211ENST00000443563 CHMP4AQ9BY43 222 aa14.07□□□□□ -0.16
HDAC6-211ENST00000443563 MBIPQ9NS73 344 aa14.07□□□□□ -0.16
HDAC6-211ENST00000443563 NARFQ9UHQ1 456 aa14.07□□□□□ -0.16
HDAC6-211ENST00000443563 ERBB4Q15303 1308 aa14.07□□□□□ -0.16
HDAC6-211ENST00000443563 USP42Q9H9J4 1324 aaKnown RBP14.07□□□□□ -0.16
HDAC6-211ENST00000443563 MSL1Q68DK7 614 aa14.06□□□□□ -0.16
HDAC6-211ENST00000443563 ZNF330Q9Y3S2 320 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-211ENST00000443563 SALL2Q9Y467 1007 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-211ENST00000443563 SCN7AQ01118 1682 aa14.05□□□□□ -0.16
HDAC6-211ENST00000443563 GYS1P13807 737 aa14.05□□□□□ -0.16
HDAC6-211ENST00000443563 BCORQ6W2J9 1755 aa14.04□□□□□ -0.16
HDAC6-211ENST00000443563 SENP3-EIF4A1A0A087X0R7 540 aa14.04□□□□□ -0.16
HDAC6-211ENST00000443563 USPL1Q5W0Q7 1092 aa14.04□□□□□ -0.16
HDAC6-211ENST00000443563 EIF2S2P20042 333 aaKnown RBP14.03□□□□□ -0.16
HDAC6-211ENST00000443563 DZIP3Q86Y13 1208 aaKnown RBP14.03□□□□□ -0.16
HDAC6-211ENST00000443563 SRP68Q9UHB9 627 aaKnown RBP14.03□□□□□ -0.16
HDAC6-211ENST00000443563 NBPF26B4DH59 902 aa14.02□□□□□ -0.17
HDAC6-211ENST00000443563 RGL2O15211 777 aa14.02□□□□□ -0.17
HDAC6-211ENST00000443563 HDGFL1Q5TGJ6 251 aa14.02□□□□□ -0.17
HDAC6-211ENST00000443563 DUSP27Q5VZP5 1158 aa14.02□□□□□ -0.17
HDAC6-211ENST00000443563 NBPF10Q6P3W6 841 aaKnown RBP14.02□□□□□ -0.17
HDAC6-211ENST00000443563 NBPF15Q8N660 670 aa14.02□□□□□ -0.17
HDAC6-211ENST00000443563 MYH16Q9H6N6 1097 aa14.02□□□□□ -0.17
HDAC6-211ENST00000443563 ZNF652Q9Y2D9 606 aa14.02□□□□□ -0.17
HDAC6-211ENST00000443563 PARP3Q9Y6F1 533 aa14.02□□□□□ -0.17
HDAC6-211ENST00000443563 MMP10P09238 476 aa14.01□□□□□ -0.17
HDAC6-211ENST00000443563 MYL6BP14649 208 aa14.01□□□□□ -0.17
HDAC6-211ENST00000443563 PIP4K2AP48426 406 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-211ENST00000443563 FKBP8Q14318 412 aa14.01□□□□□ -0.17
HDAC6-211ENST00000443563 TBC1D2BQ9UPU7 963 aa14.01□□□□□ -0.17
HDAC6-211ENST00000443563 GOLGA2Q08379 1002 aa14□□□□□ -0.17
HDAC6-211ENST00000443563 KRT24Q2M2I5 525 aa14□□□□□ -0.17
HDAC6-211ENST00000443563 CLEC4GQ6UXB4 293 aa14□□□□□ -0.17
HDAC6-211ENST00000443563 KIF6Q6ZMV9 814 aa14□□□□□ -0.17
HDAC6-211ENST00000443563 TSR2Q969E8 191 aaKnown RBP14□□□□□ -0.17
HDAC6-211ENST00000443563 FHDC1Q9C0D6 1143 aaPredicted RBP14□□□□□ -0.17
HDAC6-211ENST00000443563 DDX21Q9NR30 783 aaKnown RBP eCLIP14□□□□□ -0.17
HDAC6-211ENST00000443563 DBF4Q9UBU7 674 aaPredicted RBP14□□□□□ -0.17
HDAC6-211ENST00000443563 ZNF521Q96K83 1311 aa13.99□□□□□ -0.17
HDAC6-211ENST00000443563 CAMTA2O94983 1202 aa13.99□□□□□ -0.17
HDAC6-211ENST00000443563 TM4SF1P30408 202 aa13.99□□□□□ -0.17
HDAC6-211ENST00000443563 CD2APQ9Y5K6 639 aa13.99□□□□□ -0.17
HDAC6-211ENST00000443563 FANCIQ9NVI1 1328 aa13.98□□□□□ -0.17
HDAC6-211ENST00000443563 ERVV-1B6SEH8 477 aa13.98□□□□□ -0.17
HDAC6-211ENST00000443563 CCDC30Q5VVM6 783 aa13.98□□□□□ -0.17
HDAC6-211ENST00000443563 KLHL34Q8N239 644 aa13.98□□□□□ -0.17
HDAC6-211ENST00000443563 C8orf58Q8NAV2 365 aa13.98□□□□□ -0.17
HDAC6-211ENST00000443563 NECTIN2Q92692 538 aa13.98□□□□□ -0.17
HDAC6-211ENST00000443563 SYT17Q9BSW7 474 aa13.98□□□□□ -0.17
HDAC6-211ENST00000443563 BCL2L12Q9HB09 334 aa13.98□□□□□ -0.17
HDAC6-211ENST00000443563 HYPKQ9NX55 129 aa13.98□□□□□ -0.17
HDAC6-211ENST00000443563 NUP98P52948 1817 aa13.98□□□□□ -0.17
HDAC6-211ENST00000443563 KIF13BQ9NQT8 1826 aa13.98□□□□□ -0.17
HDAC6-211ENST00000443563 AFDNP55196 1824 aaKnown RBP13.97□□□□□ -0.17
HDAC6-211ENST00000443563 MAP3K15Q6ZN16 1313 aa13.97□□□□□ -0.17
HDAC6-211ENST00000443563 DCAF8L1A6NGE4 600 aa13.97□□□□□ -0.17
HDAC6-211ENST00000443563 E9PSI1 815 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms