RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 NRXN2Q9P2S2 1712 aa18.59■□□□□ 0.57
PTPRE-203ENST00000442830 AFDNP55196 1824 aaKnown RBP18.58■□□□□ 0.57
PTPRE-203ENST00000442830 A0A087WZG4 1122 aa18.58■□□□□ 0.56
PTPRE-203ENST00000442830 POLRMTO00411 1230 aaKnown RBP18.58■□□□□ 0.56
PTPRE-203ENST00000442830 KIF3CO14782 793 aa18.58■□□□□ 0.56
PTPRE-203ENST00000442830 TEX13AQ9BXU3 409 aaPredicted RBP18.58■□□□□ 0.56
PTPRE-203ENST00000442830 DLEC1Q9Y238 1755 aa18.58■□□□□ 0.56
PTPRE-203ENST00000442830 KCNA3P22001 575 aa18.57■□□□□ 0.56
PTPRE-203ENST00000442830 DDR1Q08345 913 aa18.57■□□□□ 0.56
PTPRE-203ENST00000442830 TEFQ10587 303 aa18.57■□□□□ 0.56
PTPRE-203ENST00000442830 USPL1Q5W0Q7 1092 aa18.57■□□□□ 0.56
PTPRE-203ENST00000442830 COL3A1P02461 1466 aaPredicted RBP18.57■□□□□ 0.56
PTPRE-203ENST00000442830 ZC3H4Q9UPT8 1303 aaKnown RBP18.56■□□□□ 0.56
PTPRE-203ENST00000442830 SIPA1L3O60292 1781 aaPredicted RBP18.56■□□□□ 0.56
PTPRE-203ENST00000442830 TOMM70O94826 608 aa18.56■□□□□ 0.56
PTPRE-203ENST00000442830 CFAP53Q96M91 514 aa18.56■□□□□ 0.56
PTPRE-203ENST00000442830 SBF1O95248 1867 aa18.56■□□□□ 0.56
PTPRE-203ENST00000442830 KDM2BQ8NHM5 1336 aa18.55■□□□□ 0.56
PTPRE-203ENST00000442830 GNAT3A8MTJ3 354 aa18.55■□□□□ 0.56
PTPRE-203ENST00000442830 SLC39A6Q13433 755 aa18.55■□□□□ 0.56
PTPRE-203ENST00000442830 PDZRN3Q9UPQ7 1066 aa18.55■□□□□ 0.56
PTPRE-203ENST00000442830 TNRC6CQ9HCJ0 1690 aaKnown RBP18.54■□□□□ 0.56
PTPRE-203ENST00000442830 U2SURPO15042 1029 aaKnown RBP18.54■□□□□ 0.56
PTPRE-203ENST00000442830 APLP1P51693 650 aa18.54■□□□□ 0.56
PTPRE-203ENST00000442830 ZBTB1Q9Y2K1 713 aa18.54■□□□□ 0.56
PTPRE-203ENST00000442830 C9orf131Q5VYM1 1079 aa18.53■□□□□ 0.56
PTPRE-203ENST00000442830 NPM2Q86SE8 214 aaKnown RBP18.53■□□□□ 0.56
PTPRE-203ENST00000442830 C16orf71Q8IYS4 520 aaPredicted RBP18.53■□□□□ 0.56
PTPRE-203ENST00000442830 NFIXQ14938 502 aa18.52■□□□□ 0.56
PTPRE-203ENST00000442830 NUDCQ9Y266 331 aa18.52■□□□□ 0.56
PTPRE-203ENST00000442830 SCN7AQ01118 1682 aa18.52■□□□□ 0.56
PTPRE-203ENST00000442830 HEG1Q9ULI3 1381 aa18.52■□□□□ 0.55
PTPRE-203ENST00000442830 ZNF790Q6PG37 636 aa18.51■□□□□ 0.55
PTPRE-203ENST00000442830 RBM46Q8TBY0 533 aaKnown RBP18.51■□□□□ 0.55
PTPRE-203ENST00000442830 SERPINB2P05120 415 aa18.5■□□□□ 0.55
PTPRE-203ENST00000442830 EIF5P55010 431 aaKnown RBP18.5■□□□□ 0.55
PTPRE-203ENST00000442830 FMNL2Q96PY5 1086 aa18.5■□□□□ 0.55
PTPRE-203ENST00000442830 RNF181Q9P0P0 153 aa18.5■□□□□ 0.55
PTPRE-203ENST00000442830 CEMIPQ8WUJ3 1361 aa18.5■□□□□ 0.55
PTPRE-203ENST00000442830 CANXP27824 592 aaKnown RBP18.49■□□□□ 0.55
PTPRE-203ENST00000442830 CHRNA5P30532 468 aa18.49■□□□□ 0.55
PTPRE-203ENST00000442830 H0YIN7 160 aa18.48■□□□□ 0.55
PTPRE-203ENST00000442830 IL6STP40189 918 aaPredicted RBP18.48■□□□□ 0.55
PTPRE-203ENST00000442830 FSTL1Q12841 308 aa18.48■□□□□ 0.55
PTPRE-203ENST00000442830 TTLL6Q8N841 843 aa18.48■□□□□ 0.55
PTPRE-203ENST00000442830 CARMIL3Q8ND23 1372 aa18.47■□□□□ 0.55
PTPRE-203ENST00000442830 IL17REQ8NFR9 667 aa18.47■□□□□ 0.55
PTPRE-203ENST00000442830 ZNF496Q96IT1 587 aaPredicted RBP18.47■□□□□ 0.55
PTPRE-203ENST00000442830 BCL2L12Q9HB09 334 aa18.47■□□□□ 0.55
PTPRE-203ENST00000442830 NMRK2Q9NPI5 230 aa18.46■□□□□ 0.55
PTPRE-203ENST00000442830 BCORQ6W2J9 1755 aa18.45■□□□□ 0.54
PTPRE-203ENST00000442830 LMNB1P20700 586 aa18.45■□□□□ 0.54
PTPRE-203ENST00000442830 PDE6BP35913 854 aa18.45■□□□□ 0.54
PTPRE-203ENST00000442830 C2CD5Q86YS7 1000 aa18.45■□□□□ 0.54
PTPRE-203ENST00000442830 RTF1Q92541 710 aaKnown RBP18.45■□□□□ 0.54
PTPRE-203ENST00000442830 WDR90Q96KV7 1748 aa18.45■□□□□ 0.54
PTPRE-203ENST00000442830 CCDC88AQ3V6T2 1871 aa18.45■□□□□ 0.54
PTPRE-203ENST00000442830 BTBD11A6QL63 1104 aa18.44■□□□□ 0.54
PTPRE-203ENST00000442830 PRKAR2BP31323 418 aa18.44■□□□□ 0.54
PTPRE-203ENST00000442830 BRIP1Q9BX63 1249 aa18.44■□□□□ 0.54
PTPRE-203ENST00000442830 RSPH6AQ9H0K4 717 aa18.44■□□□□ 0.54
PTPRE-203ENST00000442830 ANKRD31Q8N7Z5 1873 aa18.43■□□□□ 0.54
PTPRE-203ENST00000442830 TIAM2Q8IVF5 1701 aa18.43■□□□□ 0.54
PTPRE-203ENST00000442830 DICER1Q9UPY3 1922 aaKnown RBP18.43■□□□□ 0.54
PTPRE-203ENST00000442830 IFFO2Q5TF58 517 aa18.43■□□□□ 0.54
PTPRE-203ENST00000442830 RGL2O15211 777 aa18.42■□□□□ 0.54
PTPRE-203ENST00000442830 HTATSF1O43719 755 aaKnown RBP18.42■□□□□ 0.54
PTPRE-203ENST00000442830 SETDB2Q96T68 719 aa18.42■□□□□ 0.54
PTPRE-203ENST00000442830 ARFGEF2Q9Y6D5 1785 aa18.41■□□□□ 0.54
PTPRE-203ENST00000442830 NPHP1O15259 732 aa18.41■□□□□ 0.54
PTPRE-203ENST00000442830 NEFMP07197 916 aa18.41■□□□□ 0.54
PTPRE-203ENST00000442830 ST5P78524 1137 aa18.41■□□□□ 0.54
PTPRE-203ENST00000442830 SOGA3Q5TF21 947 aa18.41■□□□□ 0.54
PTPRE-203ENST00000442830 ZNF652Q9Y2D9 606 aa18.41■□□□□ 0.54
PTPRE-203ENST00000442830 ZNF330Q9Y3S2 320 aaPredicted RBP18.41■□□□□ 0.54
PTPRE-203ENST00000442830 FER1L6Q2WGJ9 1857 aa18.4■□□□□ 0.54
PTPRE-203ENST00000442830 U2AF1L5P0DN76 240 aaPredicted RBP18.4■□□□□ 0.54
PTPRE-203ENST00000442830 U2AF1Q01081 240 aaKnown RBP eCLIP18.4■□□□□ 0.54
PTPRE-203ENST00000442830 CNGB1Q14028 1251 aaPredicted RBP18.4■□□□□ 0.54
PTPRE-203ENST00000442830 TBC1D9BQ66K14 1250 aa18.4■□□□□ 0.54
PTPRE-203ENST00000442830 CLEC4GQ6UXB4 293 aa18.4■□□□□ 0.54
PTPRE-203ENST00000442830 BICDL1Q6ZP65 573 aa18.4■□□□□ 0.54
PTPRE-203ENST00000442830 SMC1BQ8NDV3 1235 aa18.4■□□□□ 0.54
PTPRE-203ENST00000442830 GLTPD2A6NH11 291 aa18.39■□□□□ 0.53
PTPRE-203ENST00000442830 SNRPA1P09661 255 aaKnown RBP18.39■□□□□ 0.53
PTPRE-203ENST00000442830 CNBD1Q8NA66 436 aa18.39■□□□□ 0.53
PTPRE-203ENST00000442830 COL11A2P13942 1736 aaPredicted RBP18.38■□□□□ 0.53
PTPRE-203ENST00000442830 VEGFAP15692 232 aaPredicted RBP18.38■□□□□ 0.53
PTPRE-203ENST00000442830 PPP2R1AP30153 589 aa18.38■□□□□ 0.53
PTPRE-203ENST00000442830 RASSF7Q02833 373 aa18.38■□□□□ 0.53
PTPRE-203ENST00000442830 PRR5LQ6MZQ0 368 aa18.38■□□□□ 0.53
PTPRE-203ENST00000442830 DPY19L2Q6NUT2 758 aa18.38■□□□□ 0.53
PTPRE-203ENST00000442830 DZIP3Q86Y13 1208 aaKnown RBP18.38■□□□□ 0.53
PTPRE-203ENST00000442830 CNKSR1Q969H4 720 aa18.38■□□□□ 0.53
PTPRE-203ENST00000442830 PHACTR3Q96KR7 559 aa18.38■□□□□ 0.53
PTPRE-203ENST00000442830 RRAGCQ9HB90 399 aa18.38■□□□□ 0.53
PTPRE-203ENST00000442830 TBC1D2BQ9UPU7 963 aa18.38■□□□□ 0.53
PTPRE-203ENST00000442830 CAMTA2O94983 1202 aa18.37■□□□□ 0.53
PTPRE-203ENST00000442830 A1BGP04217 495 aa18.37■□□□□ 0.53
PTPRE-203ENST00000442830 STYK1Q6J9G0 422 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms