RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 GCC1Q96CN9 775 aa8.9□□□□□ -0.98
HDAC6-210ENST00000441703 TERF2IPQ9NYB0 399 aa8.9□□□□□ -0.98
HDAC6-210ENST00000441703 A0A1W2PP64 1363 aa8.89□□□□□ -0.99
HDAC6-210ENST00000441703 ROCK2O75116 1388 aaKnown RBP8.89□□□□□ -0.99
HDAC6-210ENST00000441703 CNTNAP4Q9C0A0 1308 aa8.89□□□□□ -0.99
HDAC6-210ENST00000441703 SOX10P56693 466 aa8.89□□□□□ -0.99
HDAC6-210ENST00000441703 FKBP8Q14318 412 aa8.89□□□□□ -0.99
HDAC6-210ENST00000441703 SRP68Q9UHB9 627 aaKnown RBP8.89□□□□□ -0.99
HDAC6-210ENST00000441703 SPG7Q9UQ90 795 aa8.89□□□□□ -0.99
HDAC6-210ENST00000441703 POLRMTO00411 1230 aaKnown RBP8.88□□□□□ -0.99
HDAC6-210ENST00000441703 ITGBL1O95965 494 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-210ENST00000441703 CAPNS2Q96L46 248 aa8.88□□□□□ -0.99
HDAC6-210ENST00000441703 GPR101Q96P66 508 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-210ENST00000441703 TAF1DQ9H5J8 278 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-210ENST00000441703 ATG3Q9NT62 314 aa8.88□□□□□ -0.99
HDAC6-210ENST00000441703 USP42Q9H9J4 1324 aaKnown RBP8.87□□□□□ -0.99
HDAC6-210ENST00000441703 H0YIN7 160 aa8.87□□□□□ -0.99
HDAC6-210ENST00000441703 CA12O43570 354 aa8.87□□□□□ -0.99
HDAC6-210ENST00000441703 PRKCSHP14314 528 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-210ENST00000441703 FBLN1P23142 703 aa8.87□□□□□ -0.99
HDAC6-210ENST00000441703 NKX1-1Q15270 411 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-210ENST00000441703 C2CD5Q86YS7 1000 aa8.87□□□□□ -0.99
HDAC6-210ENST00000441703 DICER1Q9UPY3 1922 aaKnown RBP8.87□□□□□ -0.99
HDAC6-210ENST00000441703 ZNF831Q5JPB2 1677 aa8.87□□□□□ -0.99
HDAC6-210ENST00000441703 SCN4AP35499 1836 aa8.87□□□□□ -0.99
HDAC6-210ENST00000441703 KDRP35968 1356 aa8.86□□□□□ -0.99
HDAC6-210ENST00000441703 ZPR1O75312 459 aa8.86□□□□□ -0.99
HDAC6-210ENST00000441703 RRS1Q15050 365 aaKnown RBP8.86□□□□□ -0.99
HDAC6-210ENST00000441703 CYP4F22Q6NT55 531 aa8.86□□□□□ -0.99
HDAC6-210ENST00000441703 CNTROBQ8N137 903 aa8.86□□□□□ -0.99
HDAC6-210ENST00000441703 TAOK3Q9H2K8 898 aa8.86□□□□□ -0.99
HDAC6-210ENST00000441703 SLC12A5Q9H2X9 1139 aa8.86□□□□□ -0.99
HDAC6-210ENST00000441703 HACL1Q9UJ83 578 aa8.86□□□□□ -0.99
HDAC6-210ENST00000441703 THSD7BQ9C0I4 1608 aa8.86□□□□□ -0.99
HDAC6-210ENST00000441703 CASP8AP2Q9UKL3 1982 aa8.85□□□□□ -0.99
HDAC6-210ENST00000441703 C21orf2O43822 256 aa8.85□□□□□ -0.99
HDAC6-210ENST00000441703 MAP1SQ66K74 1059 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-210ENST00000441703 IFNL2Q8IZJ0 200 aa8.85□□□□□ -0.99
HDAC6-210ENST00000441703 NBPF15Q8N660 670 aa8.85□□□□□ -0.99
HDAC6-210ENST00000441703 ZNF622Q969S3 477 aaKnown RBP eCLIP8.85□□□□□ -0.992e-7■□□□□ 9.6
HDAC6-210ENST00000441703 L3MBTL3Q96JM7 780 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-210ENST00000441703 DLEC1Q9Y238 1755 aa8.85□□□□□ -0.99
HDAC6-210ENST00000441703 COL5A3P25940 1745 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-210ENST00000441703 TM4SF1P30408 202 aa8.84□□□□□ -0.99
HDAC6-210ENST00000441703 EPHX2P34913 555 aa8.84□□□□□ -0.99
HDAC6-210ENST00000441703 MAP2K2P36507 400 aa8.84□□□□□ -0.99
HDAC6-210ENST00000441703 PNMA8AQ86V59 439 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-210ENST00000441703 L3MBTL2Q969R5 705 aa8.84□□□□□ -0.99
HDAC6-210ENST00000441703 DDX21Q9NR30 783 aaKnown RBP eCLIP8.84□□□□□ -0.99
HDAC6-210ENST00000441703 LTBP1Q14766 1721 aa8.83□□□□□ -1
HDAC6-210ENST00000441703 NCAPD2Q15021 1401 aa8.83□□□□□ -1
HDAC6-210ENST00000441703 AOC2O75106 756 aa8.83□□□□□ -1
HDAC6-210ENST00000441703 CRKLP46109 303 aaKnown RBP8.83□□□□□ -1
HDAC6-210ENST00000441703 USPL1Q5W0Q7 1092 aa8.83□□□□□ -1
HDAC6-210ENST00000441703 PUS7Q96PZ0 661 aaKnown RBP8.83□□□□□ -1
HDAC6-210ENST00000441703 SLC4A9Q96Q91 983 aa8.83□□□□□ -1
HDAC6-210ENST00000441703 TNRC18O15417 2968 aaPredicted RBP8.83□□□□□ -1
HDAC6-210ENST00000441703 INSRP06213 1382 aa8.83□□□□□ -1
HDAC6-210ENST00000441703 LTBP3Q9NS15 1303 aa8.82□□□□□ -1
HDAC6-210ENST00000441703 KIF20BQ96Q89 1820 aa8.82□□□□□ -1
HDAC6-210ENST00000441703 SERPINB2P05120 415 aa8.82□□□□□ -1
HDAC6-210ENST00000441703 PHKG2P15735 406 aa8.82□□□□□ -1
HDAC6-210ENST00000441703 HSP90AB2PQ58FF8 381 aa8.82□□□□□ -1
HDAC6-210ENST00000441703 FLT4P35916 1363 aa8.82□□□□□ -1
HDAC6-210ENST00000441703 KIF24Q5T7B8 1368 aa8.82□□□□□ -1
HDAC6-210ENST00000441703 AFDNP55196 1824 aaKnown RBP8.82□□□□□ -1
HDAC6-210ENST00000441703 FER1L6Q2WGJ9 1857 aa8.81□□□□□ -1
HDAC6-210ENST00000441703 MYH14Q7Z406 1995 aaKnown RBP8.81□□□□□ -1
HDAC6-210ENST00000441703 ANKRD26Q9UPS8 1709 aa8.81□□□□□ -1
HDAC6-210ENST00000441703 NFIXQ14938 502 aa8.81□□□□□ -1
HDAC6-210ENST00000441703 HABP4Q5JVS0 413 aaKnown RBP8.81□□□□□ -1
HDAC6-210ENST00000441703 SOGA3Q5TF21 947 aa8.81□□□□□ -1
HDAC6-210ENST00000441703 PDZRN3Q9UPQ7 1066 aa8.81□□□□□ -1
HDAC6-210ENST00000441703 PTCD1O75127 700 aaKnown RBP8.8□□□□□ -1
HDAC6-210ENST00000441703 PDE6BP35913 854 aa8.8□□□□□ -1
HDAC6-210ENST00000441703 BRPF1P55201 1214 aaPredicted RBP8.8□□□□□ -1
HDAC6-210ENST00000441703 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.8□□□□□ -11e-11■■□□□ 11.5
HDAC6-210ENST00000441703 TLL2Q9Y6L7 1015 aa8.8□□□□□ -1
HDAC6-210ENST00000441703 ADAMTSL1Q8N6G6 1762 aa8.8□□□□□ -1
HDAC6-210ENST00000441703 RNF123Q5XPI4 1314 aa8.8□□□□□ -1
HDAC6-210ENST00000441703 ERVV-2B6SEH9 535 aa8.79□□□□□ -1
HDAC6-210ENST00000441703 HSP90AB1P08238 724 aaKnown RBP8.79□□□□□ -1
HDAC6-210ENST00000441703 CABP4P57796 275 aa8.79□□□□□ -1
HDAC6-210ENST00000441703 BICDL1Q6ZP65 573 aa8.79□□□□□ -1
HDAC6-210ENST00000441703 NRXN2Q9P2S2 1712 aa8.79□□□□□ -1
HDAC6-210ENST00000441703 ZNF541Q9H0D2 1346 aa8.79□□□□□ -1
HDAC6-210ENST00000441703 CARMIL3Q8ND23 1372 aa8.78□□□□□ -1
HDAC6-210ENST00000441703 DLL1O00548 723 aa8.78□□□□□ -1
HDAC6-210ENST00000441703 NPHP1O15259 732 aa8.78□□□□□ -1
HDAC6-210ENST00000441703 LMOD1P29536 600 aaPredicted RBP8.78□□□□□ -1
HDAC6-210ENST00000441703 CIAPIN1Q6FI81 312 aa8.78□□□□□ -1
HDAC6-210ENST00000441703 CNKSR1Q969H4 720 aa8.78□□□□□ -1
HDAC6-210ENST00000441703 TRPM7Q96QT4 1865 aa8.77□□□□□ -1.01
HDAC6-210ENST00000441703 CARD11Q9BXL7 1154 aa8.77□□□□□ -1.01
HDAC6-210ENST00000441703 GGNBP2Q9H3C7 697 aa8.77□□□□□ -1.01
HDAC6-210ENST00000441703 NARFQ9UHQ1 456 aa8.77□□□□□ -1.01
HDAC6-210ENST00000441703 RBM19Q9Y4C8 960 aaKnown RBP8.77□□□□□ -1.01
HDAC6-210ENST00000441703 TONSLQ96HA7 1378 aa8.76□□□□□ -1.01
HDAC6-210ENST00000441703 ADAMTS7Q9UKP4 1686 aa8.76□□□□□ -1.01
HDAC6-210ENST00000441703 PPM1GO15355 546 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms