RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 KCNF1Q9H3M0 494 aa24.41■■□□□ 1.5
SHOX2-203ENST00000441443 TRHP20396 242 aaPredicted RBP24.41■■□□□ 1.5
SHOX2-203ENST00000441443 KIF13AQ9H1H9 1805 aa24.41■■□□□ 1.5
SHOX2-203ENST00000441443 FIBPO43427 364 aa24.4■■□□□ 1.5
SHOX2-203ENST00000441443 ADAMTS13Q76LX8 1427 aa24.4■■□□□ 1.5
SHOX2-203ENST00000441443 ANAPC15P60006 121 aa24.4■■□□□ 1.5
SHOX2-203ENST00000441443 UNC5CLQ8IV45 518 aa24.4■■□□□ 1.5
SHOX2-203ENST00000441443 KIAA1524Q8TCG1 905 aa24.4■■□□□ 1.5
SHOX2-203ENST00000441443 IL25Q9H293 177 aa24.4■■□□□ 1.5
SHOX2-203ENST00000441443 DLG5Q8TDM6 1919 aa24.39■■□□□ 1.49
SHOX2-203ENST00000441443 RPAP1Q9BWH6 1393 aaPredicted RBP24.38■■□□□ 1.49
SHOX2-203ENST00000441443 FOXO3O43524 673 aa24.38■■□□□ 1.49
SHOX2-203ENST00000441443 CHAF1AQ13111 956 aaPredicted RBP24.37■■□□□ 1.49
SHOX2-203ENST00000441443 AATKQ6ZMQ8 1374 aa24.37■■□□□ 1.49
SHOX2-203ENST00000441443 CDK12Q9NYV4 1490 aaPredicted RBP24.37■■□□□ 1.49
SHOX2-203ENST00000441443 G2E3Q7L622 706 aa24.37■■□□□ 1.49
SHOX2-203ENST00000441443 SIRT1Q96EB6 747 aa24.37■■□□□ 1.49
SHOX2-203ENST00000441443 PTPRCP08575 1304 aa24.36■■□□□ 1.49
SHOX2-203ENST00000441443 TMEM87AQ8NBN3 555 aa24.36■■□□□ 1.49
SHOX2-203ENST00000441443 LTV1Q96GA3 475 aaPredicted RBP24.36■■□□□ 1.49
SHOX2-203ENST00000441443 DIAPH3Q9NSV4 1193 aa24.36■■□□□ 1.49
SHOX2-203ENST00000441443 UBE2HP62256 183 aa24.36■■□□□ 1.49
SHOX2-203ENST00000441443 LRRCC1Q9C099 1032 aa24.36■■□□□ 1.49
SHOX2-203ENST00000441443 AMPHP49418 695 aa24.35■■□□□ 1.49
SHOX2-203ENST00000441443 LETM1O95202 739 aaPredicted RBP24.35■■□□□ 1.49
SHOX2-203ENST00000441443 KIF20AO95235 890 aa24.35■■□□□ 1.49
SHOX2-203ENST00000441443 ZSCAN22P10073 491 aaPredicted RBP24.35■■□□□ 1.49
SHOX2-203ENST00000441443 SALL3Q9BXA9 1300 aa24.35■■□□□ 1.49
SHOX2-203ENST00000441443 CHL1O00533 1208 aa24.33■■□□□ 1.49
SHOX2-203ENST00000441443 SYT1P21579 422 aa24.33■■□□□ 1.49
SHOX2-203ENST00000441443 FUCA2Q9BTY2 467 aa24.33■■□□□ 1.49
SHOX2-203ENST00000441443 TECPR2O15040 1411 aa24.33■■□□□ 1.49
SHOX2-203ENST00000441443 PTPRUQ92729 1446 aa24.32■■□□□ 1.48
SHOX2-203ENST00000441443 NLRP6P59044 892 aa24.32■■□□□ 1.48
SHOX2-203ENST00000441443 ANKRD7Q92527 254 aa24.32■■□□□ 1.48
SHOX2-203ENST00000441443 MAP3K19Q56UN5 1328 aa24.32■■□□□ 1.48
SHOX2-203ENST00000441443 PNMA6EA0A0J9YXQ4 647 aa24.32■■□□□ 1.48
SHOX2-203ENST00000441443 STX6O43752 255 aa24.32■■□□□ 1.48
SHOX2-203ENST00000441443 MAP4K4O95819 1239 aaPredicted RBP24.32■■□□□ 1.48
SHOX2-203ENST00000441443 HAP1P54257 671 aaPredicted RBP24.32■■□□□ 1.48
SHOX2-203ENST00000441443 PLEKHG3A1L390 1219 aa24.31■■□□□ 1.48
SHOX2-203ENST00000441443 GNAI2P04899 355 aa24.31■■□□□ 1.48
SHOX2-203ENST00000441443 KIAA0232Q92628 1395 aa24.31■■□□□ 1.48
SHOX2-203ENST00000441443 PLEKHG1Q9ULL1 1385 aa24.31■■□□□ 1.48
SHOX2-203ENST00000441443 F13A1P00488 732 aa24.29■■□□□ 1.48
SHOX2-203ENST00000441443 PTGS1P23219 599 aa24.29■■□□□ 1.48
SHOX2-203ENST00000441443 HSPA4P34932 840 aa24.29■■□□□ 1.48
SHOX2-203ENST00000441443 USP6P35125 1406 aa24.29■■□□□ 1.48
SHOX2-203ENST00000441443 DNM1Q05193 864 aaKnown RBP24.29■■□□□ 1.48
SHOX2-203ENST00000441443 NECTIN2Q92692 538 aa24.29■■□□□ 1.48
SHOX2-203ENST00000441443 IL1RAPL2Q9NP60 686 aa24.29■■□□□ 1.48
SHOX2-203ENST00000441443 CHMP3Q9Y3E7 222 aa24.29■■□□□ 1.48
SHOX2-203ENST00000441443 KCNA6P17658 529 aa24.28■■□□□ 1.48
SHOX2-203ENST00000441443 AK2P54819 239 aa24.28■■□□□ 1.48
SHOX2-203ENST00000441443 RTF1Q92541 710 aaKnown RBP24.28■■□□□ 1.48
SHOX2-203ENST00000441443 UBR1Q8IWV7 1749 aa24.28■■□□□ 1.48
SHOX2-203ENST00000441443 CPA1P15085 419 aa24.28■■□□□ 1.48
SHOX2-203ENST00000441443 THEMISQ8N1K5 641 aaPredicted RBP24.28■■□□□ 1.48
SHOX2-203ENST00000441443 BCL11BQ9C0K0 894 aaPredicted RBP24.28■■□□□ 1.48
SHOX2-203ENST00000441443 CTIFO43310 598 aaKnown RBP24.27■■□□□ 1.48
SHOX2-203ENST00000441443 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.27■■□□□ 1.48
SHOX2-203ENST00000441443 SMC3Q9UQE7 1217 aa24.27■■□□□ 1.48
SHOX2-203ENST00000441443 CCT4P50991 539 aaKnown RBP24.26■■□□□ 1.47
SHOX2-203ENST00000441443 MTHFSDQ2M296 383 aaKnown RBP24.26■■□□□ 1.47
SHOX2-203ENST00000441443 RUFY3Q7L099 469 aa24.26■■□□□ 1.47
SHOX2-203ENST00000441443 NUTM1Q86Y26 1132 aa24.26■■□□□ 1.47
SHOX2-203ENST00000441443 SSH2Q76I76 1423 aa24.26■■□□□ 1.47
SHOX2-203ENST00000441443 C16orf45Q96MC5 204 aaPredicted RBP24.25■■□□□ 1.47
SHOX2-203ENST00000441443 GOLGA6L6A8MZA4 724 aa24.25■■□□□ 1.47
SHOX2-203ENST00000441443 NCBP1Q09161 790 aaKnown RBP24.25■■□□□ 1.47
SHOX2-203ENST00000441443 RASEFQ8IZ41 740 aa24.25■■□□□ 1.47
SHOX2-203ENST00000441443 SNX14Q9Y5W7 946 aa24.25■■□□□ 1.47
SHOX2-203ENST00000441443 NAA30Q147X3 362 aaPredicted RBP24.24■■□□□ 1.47
SHOX2-203ENST00000441443 LARGE1O95461 756 aa24.24■■□□□ 1.47
SHOX2-203ENST00000441443 LRMPQ12912 555 aa24.24■■□□□ 1.47
SHOX2-203ENST00000441443 TSPYL4Q9UJ04 414 aa24.24■■□□□ 1.47
SHOX2-203ENST00000441443 ZNF771Q7L3S4 317 aaPredicted RBP24.24■■□□□ 1.47
SHOX2-203ENST00000441443 ITSN1Q15811 1721 aa24.23■■□□□ 1.47
SHOX2-203ENST00000441443 TPM3P06753 285 aa24.23■■□□□ 1.47
SHOX2-203ENST00000441443 CAMK4Q16566 473 aa24.23■■□□□ 1.47
SHOX2-203ENST00000441443 IL17RAQ96F46 866 aa24.23■■□□□ 1.47
SHOX2-203ENST00000441443 ABTB2Q8N961 1025 aa24.23■■□□□ 1.47
SHOX2-203ENST00000441443 TTC14Q96N46 770 aa24.23■■□□□ 1.47
SHOX2-203ENST00000441443 EYA1Q99502 592 aa24.23■■□□□ 1.47
SHOX2-203ENST00000441443 LIMCH1Q9UPQ0 1083 aa24.23■■□□□ 1.47
SHOX2-203ENST00000441443 TBX22Q9Y458 520 aa24.23■■□□□ 1.47
SHOX2-203ENST00000441443 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.23■■□□□ 1.47
SHOX2-203ENST00000441443 LUZP1Q86V48 1076 aa24.22■■□□□ 1.47
SHOX2-203ENST00000441443 CCDC83Q8IWF9 413 aa24.22■■□□□ 1.47
SHOX2-203ENST00000441443 ATP6V1DQ9Y5K8 247 aa24.22■■□□□ 1.47
SHOX2-203ENST00000441443 CCDC192P0DO97 292 aa24.22■■□□□ 1.47
SHOX2-203ENST00000441443 STAP2Q9UGK3 403 aa24.22■■□□□ 1.47
SHOX2-203ENST00000441443 MON2Q7Z3U7 1717 aa24.22■■□□□ 1.47
SHOX2-203ENST00000441443 CCDC186Q7Z3E2 898 aa24.21■■□□□ 1.47
SHOX2-203ENST00000441443 USHBP1Q8N6Y0 703 aa24.21■■□□□ 1.47
SHOX2-203ENST00000441443 OVOS2A0A0J9YW53 1432 aa24.21■■□□□ 1.47
SHOX2-203ENST00000441443 OVOS2Q6IE36 1432 aa24.21■■□□□ 1.47
SHOX2-203ENST00000441443 VPS37CA5D8V6 355 aaPredicted RBP24.21■■□□□ 1.47
SHOX2-203ENST00000441443 GJB2P29033 226 aa24.21■■□□□ 1.47
SHOX2-203ENST00000441443 NRBP1Q9UHY1 535 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms