RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 MBIPQ9NS73 344 aa23.77■■□□□ 1.4
PTX4-202ENST00000440447 USP16Q9Y5T5 823 aa23.77■■□□□ 1.4
PTX4-202ENST00000440447 COL5A3P25940 1745 aaPredicted RBP23.76■■□□□ 1.39
PTX4-202ENST00000440447 PRAMEF22A3QJZ6 481 aa23.76■■□□□ 1.39
PTX4-202ENST00000440447 MSH5O43196 834 aa23.76■■□□□ 1.39
PTX4-202ENST00000440447 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.75■■□□□ 1.39
PTX4-202ENST00000440447 COL23A1Q86Y22 540 aaPredicted RBP23.75■■□□□ 1.39
PTX4-202ENST00000440447 PDGFDQ9GZP0 370 aaPredicted RBP23.75■■□□□ 1.39
PTX4-202ENST00000440447 TRAPPC3LQ5T215 181 aa23.74■■□□□ 1.39
PTX4-202ENST00000440447 SMIM5Q71RC9 77 aa23.74■■□□□ 1.39
PTX4-202ENST00000440447 AMIGO3Q86WK7 504 aa23.74■■□□□ 1.39
PTX4-202ENST00000440447 ZBTB1Q9Y2K1 713 aa23.74■■□□□ 1.39
PTX4-202ENST00000440447 ADRA2BP18089 450 aa23.73■■□□□ 1.39
PTX4-202ENST00000440447 CANXP27824 592 aaKnown RBP23.73■■□□□ 1.39
PTX4-202ENST00000440447 A1BGP04217 495 aa23.72■■□□□ 1.39
PTX4-202ENST00000440447 SLC16A10Q8TF71 515 aa23.72■■□□□ 1.39
PTX4-202ENST00000440447 QSER1Q2KHR3 1735 aa23.7■■□□□ 1.39
PTX4-202ENST00000440447 SOS1Q07889 1333 aaPredicted RBP23.7■■□□□ 1.38
PTX4-202ENST00000440447 ZNF521Q96K83 1311 aa23.7■■□□□ 1.38
PTX4-202ENST00000440447 KRT24Q2M2I5 525 aa23.7■■□□□ 1.38
PTX4-202ENST00000440447 TSR2Q969E8 191 aaKnown RBP23.7■■□□□ 1.38
PTX4-202ENST00000440447 ZBTB7AO95365 584 aa23.69■■□□□ 1.38
PTX4-202ENST00000440447 RFC4P35249 363 aa23.69■■□□□ 1.38
PTX4-202ENST00000440447 NPM2Q86SE8 214 aaKnown RBP23.69■■□□□ 1.38
PTX4-202ENST00000440447 ARHGEF1Q92888 912 aaKnown RBP23.69■■□□□ 1.38
PTX4-202ENST00000440447 MTFR1LQ9H019 292 aa23.69■■□□□ 1.38
PTX4-202ENST00000440447 UBR3Q6ZT12 1888 aa23.68■■□□□ 1.38
PTX4-202ENST00000440447 TUBGCP6Q96RT7 1819 aa23.68■■□□□ 1.38
PTX4-202ENST00000440447 HOXB7P09629 217 aa23.68■■□□□ 1.38
PTX4-202ENST00000440447 EIF2S2P20042 333 aaKnown RBP23.68■■□□□ 1.38
PTX4-202ENST00000440447 IL6STP40189 918 aaPredicted RBP23.68■■□□□ 1.38
PTX4-202ENST00000440447 MYH14Q7Z406 1995 aaKnown RBP23.68■■□□□ 1.38
PTX4-202ENST00000440447 CASZ1Q86V15 1759 aa23.68■■□□□ 1.38
PTX4-202ENST00000440447 EIF5P55010 431 aaKnown RBP23.67■■□□□ 1.38
PTX4-202ENST00000440447 GOLGA2Q08379 1002 aa23.67■■□□□ 1.38
PTX4-202ENST00000440447 DUSP27Q5VZP5 1158 aa23.67■■□□□ 1.38
PTX4-202ENST00000440447 MYH16Q9H6N6 1097 aa23.67■■□□□ 1.38
PTX4-202ENST00000440447 ZNF330Q9Y3S2 320 aaPredicted RBP23.67■■□□□ 1.38
PTX4-202ENST00000440447 SPON1Q9HCB6 807 aa23.66■■□□□ 1.38
PTX4-202ENST00000440447 ATF5Q9Y2D1 282 aaPredicted RBP23.66■■□□□ 1.38
PTX4-202ENST00000440447 COL15A1P39059 1388 aa23.65■■□□□ 1.38
PTX4-202ENST00000440447 FANCIQ9NVI1 1328 aa23.65■■□□□ 1.38
PTX4-202ENST00000440447 A0A087WZG4 1122 aa23.65■■□□□ 1.38
PTX4-202ENST00000440447 PIP4K2AP48426 406 aaPredicted RBP23.65■■□□□ 1.38
PTX4-202ENST00000440447 HNRNPUQ00839 825 aaKnown RBP eCLIP23.65■■□□□ 1.38
PTX4-202ENST00000440447 SPINK5Q9NQ38 1064 aaPredicted RBP23.65■■□□□ 1.38
PTX4-202ENST00000440447 ERBB4Q15303 1308 aa23.64■■□□□ 1.38
PTX4-202ENST00000440447 NBPF26B4DH59 902 aa23.64■■□□□ 1.37
PTX4-202ENST00000440447 ELL2O00472 640 aaPredicted RBP23.64■■□□□ 1.37
PTX4-202ENST00000440447 NBPF10Q6P3W6 841 aaKnown RBP23.64■■□□□ 1.37
PTX4-202ENST00000440447 NBPF15Q8N660 670 aa23.64■■□□□ 1.37
PTX4-202ENST00000440447 C8orf58Q8NAV2 365 aa23.64■■□□□ 1.37
PTX4-202ENST00000440447 ZPR1O75312 459 aa23.63■■□□□ 1.37
PTX4-202ENST00000440447 HDGFL1Q5TGJ6 251 aa23.63■■□□□ 1.37
PTX4-202ENST00000440447 NECTIN2Q92692 538 aa23.63■■□□□ 1.37
PTX4-202ENST00000440447 LAMB4A4D0S4 1761 aa23.63■■□□□ 1.37
PTX4-202ENST00000440447 E9PSI1 815 aa23.62■■□□□ 1.37
PTX4-202ENST00000440447 ARXQ96QS3 562 aa23.62■■□□□ 1.37
PTX4-202ENST00000440447 CHMP4AQ9BY43 222 aa23.62■■□□□ 1.37
PTX4-202ENST00000440447 USP42Q9H9J4 1324 aaKnown RBP23.61■■□□□ 1.37
PTX4-202ENST00000440447 MSL1Q68DK7 614 aa23.61■■□□□ 1.37
PTX4-202ENST00000440447 SRP68Q9UHB9 627 aaKnown RBP23.61■■□□□ 1.37
PTX4-202ENST00000440447 NARFQ9UHQ1 456 aa23.61■■□□□ 1.37
PTX4-202ENST00000440447 MYL6BP14649 208 aa23.6■■□□□ 1.37
PTX4-202ENST00000440447 TSPYL6Q8N831 410 aa23.6■■□□□ 1.37
PTX4-202ENST00000440447 GYS1P13807 737 aa23.59■■□□□ 1.37
PTX4-202ENST00000440447 POLD1P28340 1107 aa23.59■■□□□ 1.37
PTX4-202ENST00000440447 SLFN5Q08AF3 891 aa23.59■■□□□ 1.37
PTX4-202ENST00000440447 TWISTNBQ3B726 338 aaPredicted RBP23.59■■□□□ 1.37
PTX4-202ENST00000440447 NLGN1Q8N2Q7 840 aa23.59■■□□□ 1.37
PTX4-202ENST00000440447 TBC1D2BQ9UPU7 963 aa23.59■■□□□ 1.37
PTX4-202ENST00000440447 EXOSC9Q06265 439 aaKnown RBP23.58■■□□□ 1.37
PTX4-202ENST00000440447 PDIA6Q15084 440 aa23.58■■□□□ 1.37
PTX4-202ENST00000440447 USPL1Q5W0Q7 1092 aa23.58■■□□□ 1.37
PTX4-202ENST00000440447 DZIP3Q86Y13 1208 aaKnown RBP23.58■■□□□ 1.37
PTX4-202ENST00000440447 PTGER2P43116 358 aa23.57■■□□□ 1.36
PTX4-202ENST00000440447 CDCA7LQ96GN5 454 aa23.57■■□□□ 1.36
PTX4-202ENST00000440447 DDX21Q9NR30 783 aaKnown RBP eCLIP23.57■■□□□ 1.36
PTX4-202ENST00000440447 CHPF2Q9P2E5 772 aa23.57■■□□□ 1.36
PTX4-202ENST00000440447 CCDC30Q5VVM6 783 aa23.56■■□□□ 1.36
PTX4-202ENST00000440447 DBF4Q9UBU7 674 aaPredicted RBP23.56■■□□□ 1.36
PTX4-202ENST00000440447 ANXA1P04083 346 aa23.55■■□□□ 1.36
PTX4-202ENST00000440447 PROSER3Q2NL68 480 aa23.55■■□□□ 1.36
PTX4-202ENST00000440447 SGIP1Q9BQI5 828 aa23.55■■□□□ 1.36
PTX4-202ENST00000440447 C4AP0C0L4 1744 aa23.54■■□□□ 1.36
PTX4-202ENST00000440447 FKBP8Q14318 412 aa23.54■■□□□ 1.36
PTX4-202ENST00000440447 PPP1R1BQ9UD71 204 aaPredicted RBP23.54■■□□□ 1.36
PTX4-202ENST00000440447 CAMTA2O94983 1202 aa23.53■■□□□ 1.36
PTX4-202ENST00000440447 KIF6Q6ZMV9 814 aa23.53■■□□□ 1.36
PTX4-202ENST00000440447 BCL2L12Q9HB09 334 aa23.53■■□□□ 1.36
PTX4-202ENST00000440447 HYPKQ9NX55 129 aa23.53■■□□□ 1.36
PTX4-202ENST00000440447 VAMP4O75379 141 aa23.52■■□□□ 1.36
PTX4-202ENST00000440447 LRP10Q7Z4F1 713 aa23.52■■□□□ 1.36
PTX4-202ENST00000440447 TRMT2AQ8IZ69 625 aaKnown RBP23.52■■□□□ 1.36
PTX4-202ENST00000440447 LRP5O75197 1615 aa23.51■■□□□ 1.35
PTX4-202ENST00000440447 MMP10P09238 476 aa23.51■■□□□ 1.35
PTX4-202ENST00000440447 TTLL7Q6ZT98 887 aa23.51■■□□□ 1.35
PTX4-202ENST00000440447 STK31Q9BXU1 1019 aa23.51■■□□□ 1.35
PTX4-202ENST00000440447 ZNF652Q9Y2D9 606 aa23.51■■□□□ 1.35
PTX4-202ENST00000440447 ZBED9Q6R2W3 1325 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms