RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 NEUROD2Q15784 382 aa15.29■□□□□ 0.04
AC009404.1-202ENST00000439955 TRMT2AQ8IZ69 625 aaKnown RBP15.29■□□□□ 0.04
AC009404.1-202ENST00000439955 TRIM35Q9UPQ4 493 aa15.29■□□□□ 0.04
AC009404.1-202ENST00000439955 LOC102724428A0A0B4J2F2 783 aa15.28■□□□□ 0.04
AC009404.1-202ENST00000439955 SIK1P57059 783 aa15.28■□□□□ 0.04
AC009404.1-202ENST00000439955 CALD1Q05682 793 aaKnown RBP15.28■□□□□ 0.04
AC009404.1-202ENST00000439955 SLFN5Q08AF3 891 aa15.28■□□□□ 0.04
AC009404.1-202ENST00000439955 ITPK1Q13572 414 aa15.28■□□□□ 0.04
AC009404.1-202ENST00000439955 UBR3Q6ZT12 1888 aa15.27■□□□□ 0.04
AC009404.1-202ENST00000439955 TGFB2P61812 414 aa15.27■□□□□ 0.04
AC009404.1-202ENST00000439955 FSTL1Q12841 308 aa15.27■□□□□ 0.04
AC009404.1-202ENST00000439955 RRAGCQ9HB90 399 aa15.27■□□□□ 0.04
AC009404.1-202ENST00000439955 KCPQ6ZWJ8 1503 aa15.27■□□□□ 0.03
AC009404.1-202ENST00000439955 HTATSF1O43719 755 aaKnown RBP15.26■□□□□ 0.03
AC009404.1-202ENST00000439955 AMOTQ4VCS5 1084 aa15.26■□□□□ 0.03
AC009404.1-202ENST00000439955 DUSP27Q5VZP5 1158 aa15.26■□□□□ 0.03
AC009404.1-202ENST00000439955 CDCA7LQ96GN5 454 aa15.26■□□□□ 0.03
AC009404.1-202ENST00000439955 N4BP2Q86UW6 1770 aaPredicted RBP15.26■□□□□ 0.03
AC009404.1-202ENST00000439955 ATP6V1AP38606 617 aa15.25■□□□□ 0.03
AC009404.1-202ENST00000439955 MTHFSDQ2M296 383 aaKnown RBP15.25■□□□□ 0.03
AC009404.1-202ENST00000439955 ASAP1Q9ULH1 1129 aa15.25■□□□□ 0.03
AC009404.1-202ENST00000439955 PKD1L3Q7Z443 1732 aa15.25■□□□□ 0.03
AC009404.1-202ENST00000439955 KIAA1551Q9HCM1 1747 aa15.25■□□□□ 0.03
AC009404.1-202ENST00000439955 HSPA1AP0DMV8 641 aaKnown RBP15.24■□□□□ 0.03
AC009404.1-202ENST00000439955 HSPA1BP0DMV9 641 aaKnown RBP15.24■□□□□ 0.03
AC009404.1-202ENST00000439955 MYH16Q9H6N6 1097 aa15.24■□□□□ 0.03
AC009404.1-202ENST00000439955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.24■□□□□ 0.03
AC009404.1-202ENST00000439955 RNF181Q9P0P0 153 aa15.24■□□□□ 0.03
AC009404.1-202ENST00000439955 C10orf71Q711Q0 1435 aa15.24■□□□□ 0.03
AC009404.1-202ENST00000439955 KDM2BQ8NHM5 1336 aa15.23■□□□□ 0.03
AC009404.1-202ENST00000439955 PLEKHO1Q53GL0 409 aaPredicted RBP15.23■□□□□ 0.03
AC009404.1-202ENST00000439955 PCNTO95613 3336 aa15.23■□□□□ 0.03
AC009404.1-202ENST00000439955 SPINK5Q9NQ38 1064 aaPredicted RBP15.22■□□□□ 0.03
AC009404.1-202ENST00000439955 CCDC87Q9NVE4 849 aa15.22■□□□□ 0.03
AC009404.1-202ENST00000439955 TMOD3Q9NYL9 352 aa15.22■□□□□ 0.03
AC009404.1-202ENST00000439955 ADAMTS7Q9UKP4 1686 aa15.22■□□□□ 0.03
AC009404.1-202ENST00000439955 KCNA3P22001 575 aa15.21■□□□□ 0.03
AC009404.1-202ENST00000439955 TRAPPC3LQ5T215 181 aa15.21■□□□□ 0.03
AC009404.1-202ENST00000439955 NLGN1Q8N2Q7 840 aa15.21■□□□□ 0.03
AC009404.1-202ENST00000439955 RTF1Q92541 710 aaKnown RBP15.21■□□□□ 0.03
AC009404.1-202ENST00000439955 GNAT3A8MTJ3 354 aa15.2■□□□□ 0.02
AC009404.1-202ENST00000439955 GNAI1P63096 354 aa15.2■□□□□ 0.02
AC009404.1-202ENST00000439955 SMC1BQ8NDV3 1235 aa15.2■□□□□ 0.02
AC009404.1-202ENST00000439955 ARHGEF1Q92888 912 aaKnown RBP15.2■□□□□ 0.02
AC009404.1-202ENST00000439955 IFT57Q9NWB7 429 aa15.2■□□□□ 0.02
AC009404.1-202ENST00000439955 RTCBQ9Y3I0 505 aaKnown RBP15.2■□□□□ 0.02
AC009404.1-202ENST00000439955 ITGB4P16144 1822 aa15.2■□□□□ 0.02
AC009404.1-202ENST00000439955 CT47B1P0C2W7 299 aaPredicted RBP15.19■□□□□ 0.02
AC009404.1-202ENST00000439955 ZNF853P0CG23 659 aa15.19■□□□□ 0.02
AC009404.1-202ENST00000439955 GYS1P13807 737 aa15.19■□□□□ 0.02
AC009404.1-202ENST00000439955 NKX1-1Q15270 411 aaPredicted RBP15.19■□□□□ 0.02
AC009404.1-202ENST00000439955 AKAP4Q5JQC9 854 aa15.19■□□□□ 0.02
AC009404.1-202ENST00000439955 ATG3Q9NT62 314 aa15.19■□□□□ 0.02
AC009404.1-202ENST00000439955 PIM2Q9P1W9 311 aa15.19■□□□□ 0.02
AC009404.1-202ENST00000439955 SPG7Q9UQ90 795 aa15.19■□□□□ 0.02
AC009404.1-202ENST00000439955 PARP3Q9Y6F1 533 aa15.19■□□□□ 0.02
AC009404.1-202ENST00000439955 KIF13BQ9NQT8 1826 aa15.19■□□□□ 0.02
AC009404.1-202ENST00000439955 ZNF530Q6P9A1 599 aaPredicted RBP15.18■□□□□ 0.02
AC009404.1-202ENST00000439955 DCAF5Q96JK2 942 aa15.18■□□□□ 0.02
AC009404.1-202ENST00000439955 CFAP44Q96MT7 982 aa15.18■□□□□ 0.02
AC009404.1-202ENST00000439955 CEMIPQ8WUJ3 1361 aa15.18■□□□□ 0.02
AC009404.1-202ENST00000439955 FANCIQ9NVI1 1328 aa15.17■□□□□ 0.02
AC009404.1-202ENST00000439955 CHRNA5P30532 468 aa15.17■□□□□ 0.02
AC009404.1-202ENST00000439955 DALRD3Q5D0E6 543 aaKnown RBP15.17■□□□□ 0.02
AC009404.1-202ENST00000439955 C1orf141Q5JVX7 400 aa15.17■□□□□ 0.02
AC009404.1-202ENST00000439955 BABAM1Q9NWV8 329 aa15.17■□□□□ 0.02
AC009404.1-202ENST00000439955 RCAN3Q9UKA8 241 aa15.17■□□□□ 0.02
AC009404.1-202ENST00000439955 VIRMAQ69YN4 1812 aaKnown RBP15.17■□□□□ 0.02
AC009404.1-202ENST00000439955 RNF123Q5XPI4 1314 aa15.17■□□□□ 0.02
AC009404.1-202ENST00000439955 RFC4P35249 363 aa15.16■□□□□ 0.02
AC009404.1-202ENST00000439955 SLC4A9Q96Q91 983 aa15.16■□□□□ 0.02
AC009404.1-202ENST00000439955 RBM42Q9BTD8 480 aaKnown RBP15.16■□□□□ 0.02
AC009404.1-202ENST00000439955 C4AP0C0L4 1744 aa15.16■□□□□ 0.02
AC009404.1-202ENST00000439955 RASSF7Q02833 373 aa15.15■□□□□ 0.02
AC009404.1-202ENST00000439955 MCM10Q7L590 875 aa15.15■□□□□ 0.02
AC009404.1-202ENST00000439955 THUMPD2Q9BTF0 503 aaKnown RBP15.15■□□□□ 0.02
AC009404.1-202ENST00000439955 SCN11AQ9UI33 1791 aa15.14■□□□□ 0.01
AC009404.1-202ENST00000439955 PHKG2P15735 406 aa15.14■□□□□ 0.01
AC009404.1-202ENST00000439955 DCTN1Q14203 1278 aa15.14■□□□□ 0.01
AC009404.1-202ENST00000439955 SRP68Q9UHB9 627 aaKnown RBP15.14■□□□□ 0.01
AC009404.1-202ENST00000439955 SUPT16HQ9Y5B9 1047 aaKnown RBP15.14■□□□□ 0.01
AC009404.1-202ENST00000439955 SIPA1L3O60292 1781 aaPredicted RBP15.13■□□□□ 0.01
AC009404.1-202ENST00000439955 CHL1O00533 1208 aa15.13■□□□□ 0.01
AC009404.1-202ENST00000439955 HSP90AB1P08238 724 aaKnown RBP15.13■□□□□ 0.01
AC009404.1-202ENST00000439955 IFNL2Q8IZJ0 200 aa15.13■□□□□ 0.01
AC009404.1-202ENST00000439955 IL17REQ8NFR9 667 aa15.13■□□□□ 0.01
AC009404.1-202ENST00000439955 MRC1P22897 1456 aa15.13■□□□□ 0.01
AC009404.1-202ENST00000439955 DDR1Q08345 913 aa15.12■□□□□ 0.01
AC009404.1-202ENST00000439955 TSR2Q969E8 191 aaKnown RBP15.12■□□□□ 0.01
AC009404.1-202ENST00000439955 ZNF428Q96B54 188 aa15.12■□□□□ 0.01
AC009404.1-202ENST00000439955 MBIPQ9NS73 344 aa15.12■□□□□ 0.01
AC009404.1-202ENST00000439955 KDM3BQ7LBC6 1761 aa15.11■□□□□ 0.01
AC009404.1-202ENST00000439955 RPS6KA4O75676 772 aa15.11■□□□□ 0.01
AC009404.1-202ENST00000439955 NEFLP07196 543 aa15.11■□□□□ 0.01
AC009404.1-202ENST00000439955 FKBP8Q14318 412 aa15.11■□□□□ 0.01
AC009404.1-202ENST00000439955 TNRC6CQ9HCJ0 1690 aaKnown RBP15.11■□□□□ 0.01
AC009404.1-202ENST00000439955 BRCA1P38398 1863 aaKnown RBP15.11■□□□□ 0.01
AC009404.1-202ENST00000439955 KDM6AO15550 1401 aaPredicted RBP15.1■□□□□ 0.01
AC009404.1-202ENST00000439955 RNMTO43148 476 aaKnown RBP15.1■□□□□ 0.01
AC009404.1-202ENST00000439955 VEGFAP15692 232 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms