RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 CCDC27Q2M243 656 aa15.46■□□□□ 0.07
HSPG2-206ENST00000439717 FAM9BQ8IZU0 186 aa15.46■□□□□ 0.07
HSPG2-206ENST00000439717 ATF5Q9Y2D1 282 aaPredicted RBP15.46■□□□□ 0.07
HSPG2-206ENST00000439717 CHL1O00533 1208 aa15.45■□□□□ 0.06
HSPG2-206ENST00000439717 PTGER2P43116 358 aa15.45■□□□□ 0.06
HSPG2-206ENST00000439717 EIF4A1P60842 406 aaKnown RBP15.45■□□□□ 0.06
HSPG2-206ENST00000439717 MYH14Q7Z406 1995 aaKnown RBP15.44■□□□□ 0.06
HSPG2-206ENST00000439717 SMIM5Q71RC9 77 aa15.44■□□□□ 0.06
HSPG2-206ENST00000439717 ARHGEF1Q92888 912 aaKnown RBP15.44■□□□□ 0.06
HSPG2-206ENST00000439717 SGIP1Q9BQI5 828 aa15.44■□□□□ 0.06
HSPG2-206ENST00000439717 ZBTB1Q9Y2K1 713 aa15.44■□□□□ 0.06
HSPG2-206ENST00000439717 SOS1Q07889 1333 aaPredicted RBP15.43■□□□□ 0.06
HSPG2-206ENST00000439717 COL24A1Q17RW2 1714 aa15.43■□□□□ 0.06
HSPG2-206ENST00000439717 GIGYF1O75420 1035 aaPredicted RBP15.43■□□□□ 0.06
HSPG2-206ENST00000439717 POLD1P28340 1107 aa15.43■□□□□ 0.06
HSPG2-206ENST00000439717 RFC4P35249 363 aa15.43■□□□□ 0.06
HSPG2-206ENST00000439717 NGEFQ8N5V2 710 aa15.43■□□□□ 0.06
HSPG2-206ENST00000439717 CFAP44Q96MT7 982 aa15.43■□□□□ 0.06
HSPG2-206ENST00000439717 USP16Q9Y5T5 823 aa15.43■□□□□ 0.06
HSPG2-206ENST00000439717 SRCAPQ6ZRS2 3230 aa15.43■□□□□ 0.06
HSPG2-206ENST00000439717 IFT57Q9NWB7 429 aa15.42■□□□□ 0.06
HSPG2-206ENST00000439717 LAS1LQ9Y4W2 734 aaKnown RBP15.42■□□□□ 0.06
HSPG2-206ENST00000439717 A0A087WZG4 1122 aa15.41■□□□□ 0.06
HSPG2-206ENST00000439717 PRAMEF22A3QJZ6 481 aa15.41■□□□□ 0.06
HSPG2-206ENST00000439717 ZNF853P0CG23 659 aa15.41■□□□□ 0.06
HSPG2-206ENST00000439717 CANXP27824 592 aaKnown RBP15.41■□□□□ 0.06
HSPG2-206ENST00000439717 IL6STP40189 918 aaPredicted RBP15.41■□□□□ 0.06
HSPG2-206ENST00000439717 EIF5P55010 431 aaKnown RBP15.41■□□□□ 0.06
HSPG2-206ENST00000439717 GNAI1P63096 354 aa15.41■□□□□ 0.06
HSPG2-206ENST00000439717 PPP1R1BQ9UD71 204 aaPredicted RBP15.41■□□□□ 0.06
HSPG2-206ENST00000439717 COL15A1P39059 1388 aa15.4■□□□□ 0.06
HSPG2-206ENST00000439717 A1BGP04217 495 aa15.4■□□□□ 0.06
HSPG2-206ENST00000439717 WWC1Q8IX03 1113 aa15.4■□□□□ 0.06
HSPG2-206ENST00000439717 NLGN1Q8N2Q7 840 aa15.4■□□□□ 0.06
HSPG2-206ENST00000439717 USP42Q9H9J4 1324 aaKnown RBP15.4■□□□□ 0.06
HSPG2-206ENST00000439717 MSL1Q68DK7 614 aa15.39■□□□□ 0.05
HSPG2-206ENST00000439717 NPM2Q86SE8 214 aaKnown RBP15.39■□□□□ 0.05
HSPG2-206ENST00000439717 MIER1Q8N108 512 aa15.39■□□□□ 0.05
HSPG2-206ENST00000439717 ARXQ96QS3 562 aa15.39■□□□□ 0.05
HSPG2-206ENST00000439717 C4AP0C0L4 1744 aa15.39■□□□□ 0.05
HSPG2-206ENST00000439717 IL16Q14005 1332 aa15.39■□□□□ 0.05
HSPG2-206ENST00000439717 LAMB4A4D0S4 1761 aa15.39■□□□□ 0.05
HSPG2-206ENST00000439717 ZPR1O75312 459 aa15.38■□□□□ 0.05
HSPG2-206ENST00000439717 GYS1P13807 737 aa15.38■□□□□ 0.05
HSPG2-206ENST00000439717 MBIPQ9NS73 344 aa15.38■□□□□ 0.05
HSPG2-206ENST00000439717 NARFQ9UHQ1 456 aa15.38■□□□□ 0.05
HSPG2-206ENST00000439717 HOXB7P09629 217 aa15.37■□□□□ 0.05
HSPG2-206ENST00000439717 WDR63Q8IWG1 891 aa15.37■□□□□ 0.05
HSPG2-206ENST00000439717 ERBB4Q15303 1308 aa15.37■□□□□ 0.05
HSPG2-206ENST00000439717 NBPF26B4DH59 902 aa15.36■□□□□ 0.05
HSPG2-206ENST00000439717 USPL1Q5W0Q7 1092 aa15.36■□□□□ 0.05
HSPG2-206ENST00000439717 NBPF10Q6P3W6 841 aaKnown RBP15.36■□□□□ 0.05
HSPG2-206ENST00000439717 NBPF15Q8N660 670 aa15.36■□□□□ 0.05
HSPG2-206ENST00000439717 SRP68Q9UHB9 627 aaKnown RBP15.36■□□□□ 0.05
HSPG2-206ENST00000439717 SENP3-EIF4A1A0A087X0R7 540 aa15.35■□□□□ 0.05
HSPG2-206ENST00000439717 ZNF330Q9Y3S2 320 aaPredicted RBP15.35■□□□□ 0.05
HSPG2-206ENST00000439717 SALL2Q9Y467 1007 aaPredicted RBP15.35■□□□□ 0.05
HSPG2-206ENST00000439717 MMP10P09238 476 aa15.34■□□□□ 0.05
HSPG2-206ENST00000439717 FKBP8Q14318 412 aa15.34■□□□□ 0.05
HSPG2-206ENST00000439717 RGL2O15211 777 aa15.33■□□□□ 0.04
HSPG2-206ENST00000439717 EIF2S2P20042 333 aaKnown RBP15.33■□□□□ 0.04
HSPG2-206ENST00000439717 PIP4K2AP48426 406 aaPredicted RBP15.33■□□□□ 0.04
HSPG2-206ENST00000439717 KRT24Q2M2I5 525 aa15.33■□□□□ 0.04
HSPG2-206ENST00000439717 DZIP3Q86Y13 1208 aaKnown RBP15.33■□□□□ 0.04
HSPG2-206ENST00000439717 FHDC1Q9C0D6 1143 aaPredicted RBP15.33■□□□□ 0.04
HSPG2-206ENST00000439717 BCL2L12Q9HB09 334 aa15.33■□□□□ 0.04
HSPG2-206ENST00000439717 TBC1D2BQ9UPU7 963 aa15.33■□□□□ 0.04
HSPG2-206ENST00000439717 TM4SF1P30408 202 aa15.32■□□□□ 0.04
HSPG2-206ENST00000439717 DUSP27Q5VZP5 1158 aa15.32■□□□□ 0.04
HSPG2-206ENST00000439717 CHMP4AQ9BY43 222 aa15.32■□□□□ 0.04
HSPG2-206ENST00000439717 PARP3Q9Y6F1 533 aa15.32■□□□□ 0.04
HSPG2-206ENST00000439717 CAMTA2O94983 1202 aa15.31■□□□□ 0.04
HSPG2-206ENST00000439717 HDGFL1Q5TGJ6 251 aa15.31■□□□□ 0.04
HSPG2-206ENST00000439717 SYT17Q9BSW7 474 aa15.31■□□□□ 0.04
HSPG2-206ENST00000439717 CD2APQ9Y5K6 639 aa15.31■□□□□ 0.04
HSPG2-206ENST00000439717 MYL6BP14649 208 aa15.3■□□□□ 0.04
HSPG2-206ENST00000439717 SCN7AQ01118 1682 aa15.3■□□□□ 0.04
HSPG2-206ENST00000439717 PDIA6Q15084 440 aa15.3■□□□□ 0.04
HSPG2-206ENST00000439717 CLEC4GQ6UXB4 293 aa15.3■□□□□ 0.04
HSPG2-206ENST00000439717 TSR2Q969E8 191 aaKnown RBP15.3■□□□□ 0.04
HSPG2-206ENST00000439717 ZNF521Q96K83 1311 aa15.3■□□□□ 0.04
HSPG2-206ENST00000439717 ZNF652Q9Y2D9 606 aa15.3■□□□□ 0.04
HSPG2-206ENST00000439717 NFIXQ14938 502 aa15.29■□□□□ 0.04
HSPG2-206ENST00000439717 KIF6Q6ZMV9 814 aa15.29■□□□□ 0.04
HSPG2-206ENST00000439717 LRP10Q7Z4F1 713 aa15.29■□□□□ 0.04
HSPG2-206ENST00000439717 C8orf58Q8NAV2 365 aa15.29■□□□□ 0.04
HSPG2-206ENST00000439717 MYH16Q9H6N6 1097 aa15.29■□□□□ 0.04
HSPG2-206ENST00000439717 DDX21Q9NR30 783 aaKnown RBP eCLIP15.29■□□□□ 0.04
HSPG2-206ENST00000439717 FANCIQ9NVI1 1328 aa15.28■□□□□ 0.04
HSPG2-206ENST00000439717 ERVV-1B6SEH8 477 aa15.28■□□□□ 0.04
HSPG2-206ENST00000439717 POLRMTO00411 1230 aaKnown RBP15.28■□□□□ 0.04
HSPG2-206ENST00000439717 DDR1Q08345 913 aa15.28■□□□□ 0.04
HSPG2-206ENST00000439717 GOLGA2Q08379 1002 aa15.28■□□□□ 0.04
HSPG2-206ENST00000439717 KLHL34Q8N239 644 aa15.28■□□□□ 0.04
HSPG2-206ENST00000439717 NECTIN2Q92692 538 aa15.28■□□□□ 0.04
HSPG2-206ENST00000439717 DBF4Q9UBU7 674 aaPredicted RBP15.28■□□□□ 0.04
HSPG2-206ENST00000439717 BCORQ6W2J9 1755 aa15.28■□□□□ 0.04
HSPG2-206ENST00000439717 MAP3K15Q6ZN16 1313 aa15.27■□□□□ 0.04
HSPG2-206ENST00000439717 TBC1D9BQ66K14 1250 aa15.27■□□□□ 0.04
HSPG2-206ENST00000439717 ELL2O00472 640 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms