RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 CDK12Q9NYV4 1490 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P37-201ENST00000439613 TMEM94Q12767 1356 aa5.21□□□□□ -1.58
HMGB1P37-201ENST00000439613 SOWAHBA6NEL2 793 aa5.21□□□□□ -1.58
HMGB1P37-201ENST00000439613 DDX11L8A8MPP1 907 aa5.21□□□□□ -1.58
HMGB1P37-201ENST00000439613 NEFMP07197 916 aa5.21□□□□□ -1.58
HMGB1P37-201ENST00000439613 U2AF1L5P0DN76 240 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P37-201ENST00000439613 U2AF1Q01081 240 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P37-201ENST00000439613 ESCO1Q5FWF5 840 aa5.21□□□□□ -1.58
HMGB1P37-201ENST00000439613 SULF1Q8IWU6 871 aa5.21□□□□□ -1.58
HMGB1P37-201ENST00000439613 SLF2Q8IX21 1173 aa5.21□□□□□ -1.58
HMGB1P37-201ENST00000439613 KCTD12Q96CX2 325 aaKnown RBP5.21□□□□□ -1.58
HMGB1P37-201ENST00000439613 FAM217BQ9NTX9 383 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P37-201ENST00000439613 POLKQ9UBT6 870 aa5.21□□□□□ -1.58
HMGB1P37-201ENST00000439613 LRRC7Q96NW7 1537 aa5.21□□□□□ -1.58
HMGB1P37-201ENST00000439613 STRCP1A6NGW2 1772 aa5.21□□□□□ -1.58
HMGB1P37-201ENST00000439613 COL3A1P02461 1466 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P37-201ENST00000439613 MSH6P52701 1360 aa5.2□□□□□ -1.58
HMGB1P37-201ENST00000439613 KIF24Q5T7B8 1368 aa5.2□□□□□ -1.58
HMGB1P37-201ENST00000439613 PPM1GO15355 546 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P37-201ENST00000439613 ERICH6BQ5W0A0 696 aa5.2□□□□□ -1.58
HMGB1P37-201ENST00000439613 ABTB2Q8N961 1025 aa5.2□□□□□ -1.58
HMGB1P37-201ENST00000439613 OVOS2A0A0J9YW53 1432 aa5.2□□□□□ -1.58
HMGB1P37-201ENST00000439613 OVOS2Q6IE36 1432 aa5.2□□□□□ -1.58
HMGB1P37-201ENST00000439613 MAPK8IP3Q9UPT6 1336 aa5.2□□□□□ -1.58
HMGB1P37-201ENST00000439613 C1orf167Q5SNV9 1468 aa5.2□□□□□ -1.58
HMGB1P37-201ENST00000439613 PIK3C2AO00443 1686 aa5.19□□□□□ -1.58
HMGB1P37-201ENST00000439613 APAF1O14727 1248 aa5.19□□□□□ -1.58
HMGB1P37-201ENST00000439613 U2SURPO15042 1029 aaKnown RBP5.19□□□□□ -1.58
HMGB1P37-201ENST00000439613 BCAMP50895 628 aa5.19□□□□□ -1.58
HMGB1P37-201ENST00000439613 PPP4CP60510 307 aa5.19□□□□□ -1.58
HMGB1P37-201ENST00000439613 CCDC27Q2M243 656 aa5.19□□□□□ -1.58
HMGB1P37-201ENST00000439613 THSD4Q6ZMP0 1018 aa5.19□□□□□ -1.58
HMGB1P37-201ENST00000439613 WDR63Q8IWG1 891 aa5.19□□□□□ -1.58
HMGB1P37-201ENST00000439613 CCDC146Q8IYE0 955 aa5.19□□□□□ -1.58
HMGB1P37-201ENST00000439613 RDH13Q8NBN7 331 aa5.19□□□□□ -1.58
HMGB1P37-201ENST00000439613 KCNH5Q8NCM2 988 aa5.19□□□□□ -1.58
HMGB1P37-201ENST00000439613 TSR3Q9UJK0 312 aaKnown RBP5.19□□□□□ -1.58
HMGB1P37-201ENST00000439613 XIRP1Q702N8 1843 aaKnown RBP5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 SBNO1A3KN83 1393 aa5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 MST1RQ04912 1400 aa5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 E9PSI1 815 aa5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 SLC10A3P09131 477 aa5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 CD46P15529 392 aa5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 IL13P35225 146 aa5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 AMPHP49418 695 aa5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 KRT28Q7Z3Y7 464 aa5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 TCP11L2Q8N4U5 519 aa5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 NECTIN2Q92692 538 aa5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 BEGAINQ9BUH8 593 aa5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 HPS5Q9UPZ3 1129 aa5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 SALL2Q9Y467 1007 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 SUPT16HQ9Y5B9 1047 aaKnown RBP5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 EMILIN1Q9Y6C2 1016 aa5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 NPHP3Q7Z494 1330 aa5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 ZNF521Q96K83 1311 aa5.18□□□□□ -1.58
HMGB1P37-201ENST00000439613 RTL1A6NKG5 1358 aa5.17□□□□□ -1.58
HMGB1P37-201ENST00000439613 FLT4P35916 1363 aa5.17□□□□□ -1.58
HMGB1P37-201ENST00000439613 FOXO3O43524 673 aa5.17□□□□□ -1.58
HMGB1P37-201ENST00000439613 PTPN5P54829 565 aa5.17□□□□□ -1.58
HMGB1P37-201ENST00000439613 CALD1Q05682 793 aaKnown RBP5.17□□□□□ -1.58
HMGB1P37-201ENST00000439613 SLFN5Q08AF3 891 aa5.17□□□□□ -1.58
HMGB1P37-201ENST00000439613 LMOD3Q0VAK6 560 aa5.17□□□□□ -1.58
HMGB1P37-201ENST00000439613 RRS1Q15050 365 aaKnown RBP5.17□□□□□ -1.58
HMGB1P37-201ENST00000439613 WWC1Q8IX03 1113 aa5.17□□□□□ -1.58
HMGB1P37-201ENST00000439613 TRMT2AQ8IZ69 625 aaKnown RBP5.17□□□□□ -1.58
HMGB1P37-201ENST00000439613 RNF166Q96A37 237 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P37-201ENST00000439613 ORAI2Q96SN7 254 aa5.17□□□□□ -1.58
HMGB1P37-201ENST00000439613 MYH16Q9H6N6 1097 aa5.17□□□□□ -1.58
HMGB1P37-201ENST00000439613 SLAIN2Q9P270 581 aa5.17□□□□□ -1.58
HMGB1P37-201ENST00000439613 TRPM3Q9HCF6 1732 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P37-201ENST00000439613 MARF1Q9Y4F3 1742 aaKnown RBP5.17□□□□□ -1.58
HMGB1P37-201ENST00000439613 LTN1O94822 1766 aa5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 IQSEC2Q5JU85 1478 aa5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 FBLN1P23142 703 aa5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 TMPOP42166 694 aaKnown RBP5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 GCGRP47871 477 aa5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 MMRN1Q13201 1228 aa5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 EIF4A2Q14240 407 aaKnown RBP5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 TMEM132AQ24JP5 1023 aa5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 DDRGK1Q96HY6 314 aa5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 PLEKHF1Q96S99 279 aa5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 RSPH6AQ9H0K4 717 aa5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 WBP1LQ9NX94 342 aa5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 RCAN3Q9UKA8 241 aa5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 IL16Q14005 1332 aa5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 MAP3K19Q56UN5 1328 aa5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 RNF123Q5XPI4 1314 aa5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 ZNF335Q9H4Z2 1342 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 ARHGEF10O15013 1369 aa5.16□□□□□ -1.58
HMGB1P37-201ENST00000439613 PHRF1Q9P1Y6 1649 aaKnown RBP5.15□□□□□ -1.58
HMGB1P37-201ENST00000439613 RGPD1P0DJD0 1748 aa5.15□□□□□ -1.58
HMGB1P37-201ENST00000439613 PEAK1Q9H792 1746 aa5.15□□□□□ -1.58
HMGB1P37-201ENST00000439613 SLIT3O75094 1523 aa5.15□□□□□ -1.58
HMGB1P37-201ENST00000439613 SENP3-EIF4A1A0A087X0R7 540 aa5.15□□□□□ -1.59
HMGB1P37-201ENST00000439613 CT47B1P0C2W7 299 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P37-201ENST00000439613 HOXC9P31274 260 aa5.15□□□□□ -1.59
HMGB1P37-201ENST00000439613 PRKAR2BP31323 418 aa5.15□□□□□ -1.59
HMGB1P37-201ENST00000439613 RIPK4P57078 832 aa5.15□□□□□ -1.59
HMGB1P37-201ENST00000439613 NFE2L2Q16236 605 aa5.15□□□□□ -1.59
HMGB1P37-201ENST00000439613 KMT5BQ4FZB7 885 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms