RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 EIF2S2P20042 333 aaKnown RBP18.68■□□□□ 0.58
APP-208ENST00000439274 MSNP26038 577 aaKnown RBP18.67■□□□□ 0.58
APP-208ENST00000439274 SSH3Q8TE77 659 aa18.67■□□□□ 0.58
APP-208ENST00000439274 NPHP4O75161 1426 aaPredicted RBP18.67■□□□□ 0.58
APP-208ENST00000439274 GDPD2Q9HCC8 539 aa18.67■□□□□ 0.58
APP-208ENST00000439274 ABTB2Q8N961 1025 aa18.66■□□□□ 0.58
APP-208ENST00000439274 RNF214Q8ND24 703 aa18.66■□□□□ 0.58
APP-208ENST00000439274 PDLIM2Q96JY6 352 aa18.66■□□□□ 0.58
APP-208ENST00000439274 C14orf37Q86TY3 774 aa18.66■□□□□ 0.58
APP-208ENST00000439274 INTS4Q96HW7 963 aaKnown RBP18.65■□□□□ 0.58
APP-208ENST00000439274 NBPF7P0C2Y1 421 aaPredicted RBP18.65■□□□□ 0.58
APP-208ENST00000439274 SRGAP3O43295 1099 aa18.64■□□□□ 0.57
APP-208ENST00000439274 MBD3O95983 291 aa18.64■□□□□ 0.57
APP-208ENST00000439274 KIAA1211Q6ZU35 1233 aa18.64■□□□□ 0.57
APP-208ENST00000439274 PI4K2BQ8TCG2 481 aa18.64■□□□□ 0.57
APP-208ENST00000439274 RHPN1Q8TCX5 695 aa18.64■□□□□ 0.57
APP-208ENST00000439274 PXDNLA1KZ92 1463 aa18.64■□□□□ 0.57
APP-208ENST00000439274 GADD45BO75293 160 aaPredicted RBP18.64■□□□□ 0.57
APP-208ENST00000439274 HSPA4P34932 840 aa18.64■□□□□ 0.57
APP-208ENST00000439274 LARP6Q9BRS8 491 aaKnown RBP18.64■□□□□ 0.57
APP-208ENST00000439274 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.64■□□□□ 0.57
APP-208ENST00000439274 AOX1Q06278 1338 aa18.63■□□□□ 0.57
APP-208ENST00000439274 ANXA1P04083 346 aa18.63■□□□□ 0.57
APP-208ENST00000439274 MARF1Q9Y4F3 1742 aaKnown RBP18.63■□□□□ 0.57
APP-208ENST00000439274 POLA2Q14181 598 aa18.63■□□□□ 0.57
APP-208ENST00000439274 LGR6Q9HBX8 967 aa18.63■□□□□ 0.57
APP-208ENST00000439274 KCNQ3O43525 872 aa18.62■□□□□ 0.57
APP-208ENST00000439274 IL17RAQ96F46 866 aa18.62■□□□□ 0.57
APP-208ENST00000439274 CHPF2Q9P2E5 772 aa18.62■□□□□ 0.57
APP-208ENST00000439274 N4BP2Q86UW6 1770 aaPredicted RBP18.62■□□□□ 0.57
APP-208ENST00000439274 CACNA1FO60840 1977 aa18.62■□□□□ 0.57
APP-208ENST00000439274 RAB11FIP3O75154 756 aa18.61■□□□□ 0.57
APP-208ENST00000439274 OFD1O75665 1012 aa18.61■□□□□ 0.57
APP-208ENST00000439274 HSP90AA2PQ14568 343 aaPredicted RBP18.61■□□□□ 0.57
APP-208ENST00000439274 NOL7Q9UMY1 257 aaKnown RBP18.61■□□□□ 0.57
APP-208ENST00000439274 TPRNQ4KMQ1 711 aa18.61■□□□□ 0.57
APP-208ENST00000439274 BABAM1Q9NWV8 329 aa18.61■□□□□ 0.57
APP-208ENST00000439274 PI4KAP2A4QPH2 592 aa18.6■□□□□ 0.57
APP-208ENST00000439274 SGSM2O43147 1006 aa18.6■□□□□ 0.57
APP-208ENST00000439274 HS1BP3Q53T59 392 aa18.6■□□□□ 0.57
APP-208ENST00000439274 RASEFQ8IZ41 740 aa18.6■□□□□ 0.57
APP-208ENST00000439274 PI4KAP1Q8N8J0 262 aa18.6■□□□□ 0.57
APP-208ENST00000439274 SNX14Q9Y5W7 946 aa18.6■□□□□ 0.57
APP-208ENST00000439274 RAD50Q92878 1312 aa18.6■□□□□ 0.57
APP-208ENST00000439274 ZBTB7CA1YPR0 619 aa18.6■□□□□ 0.57
APP-208ENST00000439274 EIF4A1P60842 406 aaKnown RBP18.6■□□□□ 0.57
APP-208ENST00000439274 USP48Q86UV5 1035 aa18.6■□□□□ 0.57
APP-208ENST00000439274 DTNBO60941 627 aa18.59■□□□□ 0.57
APP-208ENST00000439274 XPCQ01831 940 aaPredicted RBP18.59■□□□□ 0.57
APP-208ENST00000439274 CWC27Q6UX04 472 aaKnown RBP18.59■□□□□ 0.57
APP-208ENST00000439274 KIF1BPQ96EK5 621 aa18.59■□□□□ 0.57
APP-208ENST00000439274 RBM33Q96EV2 1170 aaKnown RBP18.59■□□□□ 0.57
APP-208ENST00000439274 SPG7Q9UQ90 795 aa18.59■□□□□ 0.57
APP-208ENST00000439274 RPAP1Q9BWH6 1393 aaPredicted RBP18.59■□□□□ 0.57
APP-208ENST00000439274 BEND3Q5T5X7 828 aa18.59■□□□□ 0.57
APP-208ENST00000439274 NBPF6Q5VWK0 638 aa18.59■□□□□ 0.57
APP-208ENST00000439274 NBPF4Q96M43 638 aa18.59■□□□□ 0.57
APP-208ENST00000439274 LSG1Q9H089 658 aaKnown RBP18.59■□□□□ 0.57
APP-208ENST00000439274 TPM2P07951 284 aa18.58■□□□□ 0.57
APP-208ENST00000439274 CPA1P15085 419 aa18.58■□□□□ 0.57
APP-208ENST00000439274 DNAAF4Q8WXU2 420 aa18.58■□□□□ 0.57
APP-208ENST00000439274 ANKARQ7Z5J8 1434 aa18.58■□□□□ 0.56
APP-208ENST00000439274 TSPY26PQ9H489 355 aa18.58■□□□□ 0.56
APP-208ENST00000439274 WDR33Q9C0J8 1336 aaKnown RBP18.58■□□□□ 0.56
APP-208ENST00000439274 CEMIPQ8WUJ3 1361 aa18.57■□□□□ 0.56
APP-208ENST00000439274 AK2P54819 239 aa18.57■□□□□ 0.56
APP-208ENST00000439274 CNTROBQ8N137 903 aa18.57■□□□□ 0.56
APP-208ENST00000439274 RRP9O43818 475 aaKnown RBP18.56■□□□□ 0.56
APP-208ENST00000439274 PLEKHG5O94827 1062 aa18.56■□□□□ 0.56
APP-208ENST00000439274 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.56■□□□□ 0.56
APP-208ENST00000439274 TTC14Q96N46 770 aa18.56■□□□□ 0.56
APP-208ENST00000439274 OS9Q13438 667 aaPredicted RBP18.56■□□□□ 0.56
APP-208ENST00000439274 RUFY3Q7L099 469 aa18.56■□□□□ 0.56
APP-208ENST00000439274 CNPY2Q9Y2B0 182 aa18.56■□□□□ 0.56
APP-208ENST00000439274 ZKSCAN5Q9Y2L8 839 aa18.56■□□□□ 0.56
APP-208ENST00000439274 R3HCC1Q9Y3T6 440 aaKnown RBP18.55■□□□□ 0.56
APP-208ENST00000439274 TCHHQ07283 1943 aa18.55■□□□□ 0.56
APP-208ENST00000439274 ADGRL3Q9HAR2 1447 aa18.55■□□□□ 0.56
APP-208ENST00000439274 ZNF500O60304 480 aaPredicted RBP18.55■□□□□ 0.56
APP-208ENST00000439274 EPB41L2O43491 1005 aaKnown RBP18.54■□□□□ 0.56
APP-208ENST00000439274 ADCY9O60503 1353 aa18.54■□□□□ 0.56
APP-208ENST00000439274 MPRIPQ6WCQ1 1025 aa18.54■□□□□ 0.56
APP-208ENST00000439274 SYAP1Q96A49 352 aaPredicted RBP18.54■□□□□ 0.56
APP-208ENST00000439274 LRRC59Q96AG4 307 aaKnown RBP18.54■□□□□ 0.56
APP-208ENST00000439274 LARGE1O95461 756 aa18.54■□□□□ 0.56
APP-208ENST00000439274 IP6K1Q92551 441 aa18.54■□□□□ 0.56
APP-208ENST00000439274 STRCP1A6NGW2 1772 aa18.53■□□□□ 0.56
APP-208ENST00000439274 LTN1O94822 1766 aa18.53■□□□□ 0.56
APP-208ENST00000439274 KDM4FA0A1W2PPD8 638 aa18.53■□□□□ 0.56
APP-208ENST00000439274 BTBD11A6QL63 1104 aa18.53■□□□□ 0.56
APP-208ENST00000439274 CASTP20810 708 aaKnown RBP18.53■□□□□ 0.56
APP-208ENST00000439274 PA2G4Q9UQ80 394 aaKnown RBP18.53■□□□□ 0.56
APP-208ENST00000439274 PTH1RQ03431 593 aa18.52■□□□□ 0.56
APP-208ENST00000439274 CCDC39Q9UFE4 941 aa18.52■□□□□ 0.56
APP-208ENST00000439274 LIMCH1Q9UPQ0 1083 aa18.52■□□□□ 0.56
APP-208ENST00000439274 ZSCAN22P10073 491 aaPredicted RBP18.52■□□□□ 0.55
APP-208ENST00000439274 SYT1P21579 422 aa18.52■□□□□ 0.55
APP-208ENST00000439274 TEFQ10587 303 aa18.52■□□□□ 0.55
APP-208ENST00000439274 MPNDQ8N594 471 aa18.52■□□□□ 0.55
APP-208ENST00000439274 DDX54Q8TDD1 881 aaKnown RBP18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms