RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 ZBTB3Q9H5J0 574 aa16.01■□□□□ 0.15
LRCH3-206ENST00000438796 ZNF213O14771 459 aa16.01■□□□□ 0.15
LRCH3-206ENST00000438796 PRG4Q92954 1404 aaPredicted RBP16.01■□□□□ 0.15
LRCH3-206ENST00000438796 PRKCSHP14314 528 aaPredicted RBP16.01■□□□□ 0.15
LRCH3-206ENST00000438796 SYCP3Q8IZU3 236 aa16.01■□□□□ 0.15
LRCH3-206ENST00000438796 C11orf95C9JLR9 678 aaPredicted RBP16■□□□□ 0.15
LRCH3-206ENST00000438796 IFIT3O14879 490 aaKnown RBP16■□□□□ 0.15
LRCH3-206ENST00000438796 NCOA2Q15596 1464 aa16■□□□□ 0.15
LRCH3-206ENST00000438796 TMEM266Q2M3C6 531 aa16■□□□□ 0.15
LRCH3-206ENST00000438796 TCERG1LQ5VWI1 586 aa16■□□□□ 0.15
LRCH3-206ENST00000438796 PRPF4BQ13523 1007 aaKnown RBP16■□□□□ 0.15
LRCH3-206ENST00000438796 NUP88Q99567 741 aaPredicted RBP16■□□□□ 0.15
LRCH3-206ENST00000438796 IFFO1Q0D2I5 559 aa16■□□□□ 0.15
LRCH3-206ENST00000438796 BICD1Q96G01 975 aa16■□□□□ 0.15
LRCH3-206ENST00000438796 ZSCAN31Q96LW9 406 aaPredicted RBP16■□□□□ 0.15
LRCH3-206ENST00000438796 PPP6R1Q9UPN7 881 aa16■□□□□ 0.15
LRCH3-206ENST00000438796 IQCA1Q86XH1 822 aa16■□□□□ 0.15
LRCH3-206ENST00000438796 C8orf76Q96K31 380 aa15.99■□□□□ 0.15
LRCH3-206ENST00000438796 SYNJ2O15056 1496 aa15.99■□□□□ 0.15
LRCH3-206ENST00000438796 MAP3K11Q16584 847 aa15.99■□□□□ 0.15
LRCH3-206ENST00000438796 EHMT1Q9H9B1 1298 aa15.99■□□□□ 0.15
LRCH3-206ENST00000438796 ANKRD18BA2A2Z9 1011 aa15.99■□□□□ 0.15
LRCH3-206ENST00000438796 GRPEL1Q9HAV7 217 aa15.99■□□□□ 0.15
LRCH3-206ENST00000438796 LUZP1Q86V48 1076 aa15.98■□□□□ 0.15
LRCH3-206ENST00000438796 PANK2Q9BZ23 570 aa15.98■□□□□ 0.15
LRCH3-206ENST00000438796 RFC4P35249 363 aa15.98■□□□□ 0.15
LRCH3-206ENST00000438796 TERF1P54274 439 aa15.98■□□□□ 0.15
LRCH3-206ENST00000438796 MRPS9P82933 396 aaKnown RBP15.98■□□□□ 0.15
LRCH3-206ENST00000438796 FOXO3O43524 673 aa15.98■□□□□ 0.15
LRCH3-206ENST00000438796 PRC1O43663 620 aa15.98■□□□□ 0.15
LRCH3-206ENST00000438796 TAF7Q15545 349 aaPredicted RBP15.98■□□□□ 0.15
LRCH3-206ENST00000438796 ACSBG1Q96GR2 724 aa15.98■□□□□ 0.15
LRCH3-206ENST00000438796 PDE3AQ14432 1141 aa15.98■□□□□ 0.15
LRCH3-206ENST00000438796 GRIPAP1Q4V328 841 aa15.98■□□□□ 0.15
LRCH3-206ENST00000438796 HOOK3Q86VS8 718 aa15.98■□□□□ 0.15
LRCH3-206ENST00000438796 CKAP2LQ8IYA6 745 aa15.98■□□□□ 0.15
LRCH3-206ENST00000438796 LMAN1P49257 510 aa15.98■□□□□ 0.15
LRCH3-206ENST00000438796 MAP3K9P80192 1104 aa15.98■□□□□ 0.15
LRCH3-206ENST00000438796 KIF1BPQ96EK5 621 aa15.98■□□□□ 0.15
LRCH3-206ENST00000438796 NSD3Q9BZ95 1437 aa15.98■□□□□ 0.15
LRCH3-206ENST00000438796 GOLGA8AA7E2F4 631 aa15.97■□□□□ 0.15
LRCH3-206ENST00000438796 GOLGA8BA8MQT2 603 aa15.97■□□□□ 0.15
LRCH3-206ENST00000438796 ATP5J2-PTCD1G3V325 749 aa15.97■□□□□ 0.15
LRCH3-206ENST00000438796 HOMER2Q9NSB8 354 aa15.97■□□□□ 0.15
LRCH3-206ENST00000438796 STAMBPO95630 424 aa15.97■□□□□ 0.15
LRCH3-206ENST00000438796 CATIPQ7Z7H3 387 aa15.97■□□□□ 0.15
LRCH3-206ENST00000438796 HAND2P61296 217 aa15.97■□□□□ 0.15
LRCH3-206ENST00000438796 NFE2L2Q16236 605 aa15.97■□□□□ 0.15
LRCH3-206ENST00000438796 STAC3Q96MF2 364 aa15.97■□□□□ 0.15
LRCH3-206ENST00000438796 INCENPQ9NQS7 918 aa15.97■□□□□ 0.15
LRCH3-206ENST00000438796 SNRKQ9NRH2 765 aa15.97■□□□□ 0.15
LRCH3-206ENST00000438796 CCDC194A0A1B0GVG4 234 aa15.97■□□□□ 0.15
LRCH3-206ENST00000438796 BAG4O95429 457 aaKnown RBP15.97■□□□□ 0.15
LRCH3-206ENST00000438796 WDR63Q8IWG1 891 aa15.97■□□□□ 0.15
LRCH3-206ENST00000438796 CEP63Q96MT8 703 aa15.97■□□□□ 0.15
LRCH3-206ENST00000438796 KIF21BO75037 1637 aa15.97■□□□□ 0.15
LRCH3-206ENST00000438796 TMCO5BA8MYB1 307 aa15.97■□□□□ 0.15
LRCH3-206ENST00000438796 KCNH5Q8NCM2 988 aa15.96■□□□□ 0.15
LRCH3-206ENST00000438796 PLS1Q14651 629 aa15.96■□□□□ 0.15
LRCH3-206ENST00000438796 TMPOP42166 694 aaKnown RBP15.96■□□□□ 0.15
LRCH3-206ENST00000438796 CRACR2AQ9BSW2 395 aa15.96■□□□□ 0.15
LRCH3-206ENST00000438796 EXOC5O00471 708 aa15.96■□□□□ 0.14
LRCH3-206ENST00000438796 BIN1O00499 593 aa15.96■□□□□ 0.14
LRCH3-206ENST00000438796 DPH6Q7L8W6 267 aa15.95■□□□□ 0.14
LRCH3-206ENST00000438796 CFTRP13569 1480 aa15.95■□□□□ 0.14
LRCH3-206ENST00000438796 KIF20AO95235 890 aa15.95■□□□□ 0.14
LRCH3-206ENST00000438796 ARL1P40616 181 aaPredicted RBP15.95■□□□□ 0.14
LRCH3-206ENST00000438796 MTIF2P46199 727 aaKnown RBP15.95■□□□□ 0.14
LRCH3-206ENST00000438796 SMC1AQ14683 1233 aaKnown RBP15.95■□□□□ 0.14
LRCH3-206ENST00000438796 TMCO3Q6UWJ1 677 aa15.95■□□□□ 0.14
LRCH3-206ENST00000438796 VPS36Q86VN1 386 aa15.95■□□□□ 0.14
LRCH3-206ENST00000438796 CNNM3Q8NE01 707 aa15.95■□□□□ 0.14
LRCH3-206ENST00000438796 MX1P20591 662 aa15.95■□□□□ 0.14
LRCH3-206ENST00000438796 TRMT1Q9NXH9 659 aaKnown RBP15.95■□□□□ 0.14
LRCH3-206ENST00000438796 C9orf84Q5VXU9 1444 aa15.95■□□□□ 0.14
LRCH3-206ENST00000438796 LRRC9Q6ZRR7 1453 aa15.95■□□□□ 0.14
LRCH3-206ENST00000438796 TSPY2A6NKD2 308 aa15.95■□□□□ 0.14
LRCH3-206ENST00000438796 DDX46Q7L014 1031 aaKnown RBP15.95■□□□□ 0.14
LRCH3-206ENST00000438796 SLF2Q8IX21 1173 aa15.95■□□□□ 0.14
LRCH3-206ENST00000438796 GOLIM4O00461 696 aa15.94■□□□□ 0.14
LRCH3-206ENST00000438796 ANKRD30BQ9BXX2 1392 aa15.94■□□□□ 0.14
LRCH3-206ENST00000438796 PABPN1LA6NDY0 278 aaKnown RBP15.94■□□□□ 0.14
LRCH3-206ENST00000438796 NOP2P46087 812 aaKnown RBP15.94■□□□□ 0.14
LRCH3-206ENST00000438796 MTERF4Q7Z6M4 381 aaKnown RBP15.94■□□□□ 0.14
LRCH3-206ENST00000438796 RAB34Q9BZG1 259 aa15.94■□□□□ 0.14
LRCH3-206ENST00000438796 A0A087WZG4 1122 aa15.94■□□□□ 0.14
LRCH3-206ENST00000438796 RGS22Q8NE09 1264 aa15.94■□□□□ 0.14
LRCH3-206ENST00000438796 IDEP14735 1019 aa15.94■□□□□ 0.14
LRCH3-206ENST00000438796 KIF4BQ2VIQ3 1234 aa15.94■□□□□ 0.14
LRCH3-206ENST00000438796 RBM26Q5T8P6 1007 aaKnown RBP15.94■□□□□ 0.14
LRCH3-206ENST00000438796 C16orf71Q8IYS4 520 aaPredicted RBP15.94■□□□□ 0.14
LRCH3-206ENST00000438796 KIF5CO60282 957 aa15.93■□□□□ 0.14
LRCH3-206ENST00000438796 TOP1P11387 765 aaKnown RBP15.93■□□□□ 0.14
LRCH3-206ENST00000438796 CABP5Q9NP86 173 aa15.93■□□□□ 0.14
LRCH3-206ENST00000438796 MAP3K2Q9Y2U5 619 aa15.93■□□□□ 0.14
LRCH3-206ENST00000438796 CCDC40Q4G0X9 1142 aa15.93■□□□□ 0.14
LRCH3-206ENST00000438796 TICAM2Q86XR7 235 aa15.93■□□□□ 0.14
LRCH3-206ENST00000438796 KAT14Q9H8E8 782 aa15.93■□□□□ 0.14
LRCH3-206ENST00000438796 MYO1BO43795 1136 aa15.93■□□□□ 0.14
LRCH3-206ENST00000438796 URI1O94763 535 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms