RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 DCTN1Q14203 1278 aa14.91□□□□□ -0.02
SNHG3-202ENST00000437681 SLC4A9Q96Q91 983 aa14.91□□□□□ -0.02
SNHG3-202ENST00000437681 GIGYF1O75420 1035 aaPredicted RBP14.9□□□□□ -0.02
SNHG3-202ENST00000437681 ZNF496Q96IT1 587 aaPredicted RBP14.9□□□□□ -0.02
SNHG3-202ENST00000437681 MYH14Q7Z406 1995 aaKnown RBP14.9□□□□□ -0.02
SNHG3-202ENST00000437681 ITPK1Q13572 414 aa14.9□□□□□ -0.02
SNHG3-202ENST00000437681 LINC00116Q8NCU8 138 aa14.9□□□□□ -0.02
SNHG3-202ENST00000437681 CCDC87Q9NVE4 849 aa14.9□□□□□ -0.02
SNHG3-202ENST00000437681 RRP7AQ9Y3A4 280 aaKnown RBP14.9□□□□□ -0.02
SNHG3-202ENST00000437681 IL6STP40189 918 aaPredicted RBP14.89□□□□□ -0.03
SNHG3-202ENST00000437681 TRMT2AQ8IZ69 625 aaKnown RBP14.89□□□□□ -0.03
SNHG3-202ENST00000437681 AK7Q96M32 723 aa14.89□□□□□ -0.03
SNHG3-202ENST00000437681 RBM42Q9BTD8 480 aaKnown RBP14.89□□□□□ -0.03
SNHG3-202ENST00000437681 ZBED9Q6R2W3 1325 aa14.89□□□□□ -0.03
SNHG3-202ENST00000437681 GOLGA2Q08379 1002 aa14.88□□□□□ -0.03
SNHG3-202ENST00000437681 MBIPQ9NS73 344 aa14.88□□□□□ -0.03
SNHG3-202ENST00000437681 SLC39A6Q13433 755 aa14.87□□□□□ -0.03
SNHG3-202ENST00000437681 INTS5Q6P9B9 1019 aaKnown RBP14.87□□□□□ -0.03
SNHG3-202ENST00000437681 CRKLP46109 303 aaKnown RBP14.86□□□□□ -0.03
SNHG3-202ENST00000437681 NEUROD2Q15784 382 aa14.86□□□□□ -0.03
SNHG3-202ENST00000437681 ANP32EQ9BTT0 268 aa14.86□□□□□ -0.03
SNHG3-202ENST00000437681 RTCBQ9Y3I0 505 aaKnown RBP14.86□□□□□ -0.03
SNHG3-202ENST00000437681 IBTKQ9P2D0 1353 aaPredicted RBP14.86□□□□□ -0.03
SNHG3-202ENST00000437681 DNAJC10Q8IXB1 793 aa14.85□□□□□ -0.03
SNHG3-202ENST00000437681 SLFN5Q08AF3 891 aa14.85□□□□□ -0.03
SNHG3-202ENST00000437681 ZNF827Q17R98 1081 aa14.85□□□□□ -0.03
SNHG3-202ENST00000437681 THUMPD2Q9BTF0 503 aaKnown RBP14.85□□□□□ -0.03
SNHG3-202ENST00000437681 PNPLA7Q6ZV29 1317 aa14.84□□□□□ -0.03
SNHG3-202ENST00000437681 PTCD1O75127 700 aaKnown RBP14.84□□□□□ -0.03
SNHG3-202ENST00000437681 EIF5P55010 431 aaKnown RBP14.84□□□□□ -0.03
SNHG3-202ENST00000437681 ANO8Q9HCE9 1232 aaPredicted RBP14.84□□□□□ -0.03
SNHG3-202ENST00000437681 FANCIQ9NVI1 1328 aa14.83□□□□□ -0.03
SNHG3-202ENST00000437681 NRXN2Q9P2S2 1712 aa14.83□□□□□ -0.03
SNHG3-202ENST00000437681 KCNQ3O43525 872 aa14.83□□□□□ -0.03
SNHG3-202ENST00000437681 COL15A1P39059 1388 aa14.83□□□□□ -0.04
SNHG3-202ENST00000437681 TRAPPC3LQ5T215 181 aa14.83□□□□□ -0.04
SNHG3-202ENST00000437681 ANKRD36CQ5JPF3 1778 aa14.83□□□□□ -0.04
SNHG3-202ENST00000437681 ERVV-1B6SEH8 477 aa14.82□□□□□ -0.04
SNHG3-202ENST00000437681 TFCP2L1Q9NZI6 479 aa14.82□□□□□ -0.04
SNHG3-202ENST00000437681 CLEC4GQ6UXB4 293 aa14.82□□□□□ -0.04
SNHG3-202ENST00000437681 MTFR1LQ9H019 292 aa14.82□□□□□ -0.04
SNHG3-202ENST00000437681 CCDC30Q5VVM6 783 aa14.81□□□□□ -0.04
SNHG3-202ENST00000437681 DDX21Q9NR30 783 aaKnown RBP eCLIP14.81□□□□□ -0.04
SNHG3-202ENST00000437681 HYPKQ9NX55 129 aa14.81□□□□□ -0.04
SNHG3-202ENST00000437681 PODXL2Q9NZ53 605 aa14.81□□□□□ -0.04
SNHG3-202ENST00000437681 NARFQ9UHQ1 456 aa14.81□□□□□ -0.04
SNHG3-202ENST00000437681 KIF13BQ9NQT8 1826 aa14.81□□□□□ -0.04
SNHG3-202ENST00000437681 GNPATO15228 680 aa14.81□□□□□ -0.04
SNHG3-202ENST00000437681 BRPF1P55201 1214 aaPredicted RBP14.81□□□□□ -0.04
SNHG3-202ENST00000437681 DUSP27Q5VZP5 1158 aa14.81□□□□□ -0.04
SNHG3-202ENST00000437681 DBF4Q9UBU7 674 aaPredicted RBP14.81□□□□□ -0.04
SNHG3-202ENST00000437681 USP42Q9H9J4 1324 aaKnown RBP14.8□□□□□ -0.04
SNHG3-202ENST00000437681 N4BP2Q86UW6 1770 aaPredicted RBP14.8□□□□□ -0.04
SNHG3-202ENST00000437681 NLGN1Q8N2Q7 840 aa14.79□□□□□ -0.04
SNHG3-202ENST00000437681 USP16Q9Y5T5 823 aa14.79□□□□□ -0.04
SNHG3-202ENST00000437681 EP400Q96L91 3159 aa14.79□□□□□ -0.04
SNHG3-202ENST00000437681 ALDH1L2Q3SY69 923 aa14.79□□□□□ -0.04
SNHG3-202ENST00000437681 ATP10DQ9P241 1426 aa14.79□□□□□ -0.04
SNHG3-202ENST00000437681 LRP10Q7Z4F1 713 aa14.79□□□□□ -0.04
SNHG3-202ENST00000437681 MIS18AQ9NYP9 233 aa14.79□□□□□ -0.04
SNHG3-202ENST00000437681 RIC1Q4ADV7 1423 aa14.78□□□□□ -0.04
SNHG3-202ENST00000437681 RNF123Q5XPI4 1314 aa14.78□□□□□ -0.04
SNHG3-202ENST00000437681 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.78□□□□□ -0.04
SNHG3-202ENST00000437681 COL23A1Q86Y22 540 aaPredicted RBP14.78□□□□□ -0.04
SNHG3-202ENST00000437681 UBE2Q2Q8WVN8 375 aa14.78□□□□□ -0.04
SNHG3-202ENST00000437681 ZNF652Q9Y2D9 606 aa14.78□□□□□ -0.04
SNHG3-202ENST00000437681 ZBTB1Q9Y2K1 713 aa14.78□□□□□ -0.04
SNHG3-202ENST00000437681 TWISTNBQ3B726 338 aaPredicted RBP14.78□□□□□ -0.04
SNHG3-202ENST00000437681 LAS1LQ9Y4W2 734 aaKnown RBP14.78□□□□□ -0.04
SNHG3-202ENST00000437681 NUP98P52948 1817 aa14.77□□□□□ -0.04
SNHG3-202ENST00000437681 RFC4P35249 363 aa14.77□□□□□ -0.04
SNHG3-202ENST00000437681 PDIA6Q15084 440 aa14.77□□□□□ -0.04
SNHG3-202ENST00000437681 HDGFL1Q5TGJ6 251 aa14.77□□□□□ -0.04
SNHG3-202ENST00000437681 NPM2Q86SE8 214 aaKnown RBP14.77□□□□□ -0.04
SNHG3-202ENST00000437681 ARHGEF1Q92888 912 aaKnown RBP14.77□□□□□ -0.04
SNHG3-202ENST00000437681 R3HDM1Q15032 1099 aaKnown RBP14.77□□□□□ -0.05
SNHG3-202ENST00000437681 HSP90AB3PQ58FF7 597 aa14.77□□□□□ -0.05
SNHG3-202ENST00000437681 PDZRN3Q9UPQ7 1066 aa14.77□□□□□ -0.05
SNHG3-202ENST00000437681 ARFGEF2Q9Y6D5 1785 aa14.76□□□□□ -0.05
SNHG3-202ENST00000437681 VAMP4O75379 141 aa14.76□□□□□ -0.05
SNHG3-202ENST00000437681 NBPF26B4DH59 902 aa14.76□□□□□ -0.05
SNHG3-202ENST00000437681 HNRNPUQ00839 825 aaKnown RBP eCLIP14.76□□□□□ -0.05
SNHG3-202ENST00000437681 NBPF10Q6P3W6 841 aaKnown RBP14.76□□□□□ -0.05
SNHG3-202ENST00000437681 NBPF15Q8N660 670 aa14.76□□□□□ -0.05
SNHG3-202ENST00000437681 SPON1Q9HCB6 807 aa14.76□□□□□ -0.05
SNHG3-202ENST00000437681 ZPR1O75312 459 aa14.75□□□□□ -0.05
SNHG3-202ENST00000437681 C8orf58Q8NAV2 365 aa14.75□□□□□ -0.05
SNHG3-202ENST00000437681 KIF6Q6ZMV9 814 aa14.75□□□□□ -0.05
SNHG3-202ENST00000437681 SGIP1Q9BQI5 828 aa14.75□□□□□ -0.05
SNHG3-202ENST00000437681 STK31Q9BXU1 1019 aa14.75□□□□□ -0.05
SNHG3-202ENST00000437681 MAP3K15Q6ZN16 1313 aa14.75□□□□□ -0.05
SNHG3-202ENST00000437681 PXDNLA1KZ92 1463 aa14.75□□□□□ -0.05
SNHG3-202ENST00000437681 CAMTA2O94983 1202 aa14.74□□□□□ -0.05
SNHG3-202ENST00000437681 A1BGP04217 495 aa14.74□□□□□ -0.05
SNHG3-202ENST00000437681 LAMB2P55268 1798 aa14.73□□□□□ -0.05
SNHG3-202ENST00000437681 DDX58O95786 925 aaKnown RBP14.73□□□□□ -0.05
SNHG3-202ENST00000437681 POLD1P28340 1107 aa14.73□□□□□ -0.05
SNHG3-202ENST00000437681 EXOSC9Q06265 439 aaKnown RBP14.73□□□□□ -0.05
SNHG3-202ENST00000437681 GYS1P13807 737 aa14.73□□□□□ -0.05
SNHG3-202ENST00000437681 TM4SF1P30408 202 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms