RNA–Protein interactions for RNA: ENST00000437615.1

LINC00242-201, long intergenic non-protein coding RNA 242, humanhuman

TSL 2 BASIC

Gene LINC00242, Length 2,418 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242-201ENST00000437615 PDIA6Q15084 440 aa15.38■□□□□ 0.05
LINC00242-201ENST00000437615 LARP1Q6PKG0 1096 aaKnown RBP15.38■□□□□ 0.05
LINC00242-201ENST00000437615 BECN1Q14457 450 aa15.37■□□□□ 0.05
LINC00242-201ENST00000437615 TTC22Q5TAA0 569 aa15.37■□□□□ 0.05
LINC00242-201ENST00000437615 IL2RBP14784 551 aa15.37■□□□□ 0.05
LINC00242-201ENST00000437615 TBC1D9Q6ZT07 1266 aa15.37■□□□□ 0.05
LINC00242-201ENST00000437615 ADAMTS7Q9UKP4 1686 aa15.37■□□□□ 0.05
LINC00242-201ENST00000437615 DDX58O95786 925 aaKnown RBP15.36■□□□□ 0.05
LINC00242-201ENST00000437615 SNRPA1P09661 255 aaKnown RBP15.36■□□□□ 0.05
LINC00242-201ENST00000437615 LRRCC1Q9C099 1032 aa15.36■□□□□ 0.05
LINC00242-201ENST00000437615 USP16Q9Y5T5 823 aa15.36■□□□□ 0.05
LINC00242-201ENST00000437615 COL5A2P05997 1499 aaPredicted RBP15.36■□□□□ 0.05
LINC00242-201ENST00000437615 MYL6BP14649 208 aa15.36■□□□□ 0.05
LINC00242-201ENST00000437615 PPP1R42Q7Z4L9 355 aa15.36■□□□□ 0.05
LINC00242-201ENST00000437615 DDX54Q8TDD1 881 aaKnown RBP15.36■□□□□ 0.05
LINC00242-201ENST00000437615 FMNL2Q96PY5 1086 aa15.36■□□□□ 0.05
LINC00242-201ENST00000437615 PCDH11XQ9BZA7 1347 aa15.36■□□□□ 0.05
LINC00242-201ENST00000437615 PCDH11YQ9BZA8 1340 aa15.36■□□□□ 0.05
LINC00242-201ENST00000437615 CDC45O75419 566 aa15.35■□□□□ 0.05
LINC00242-201ENST00000437615 SSH3Q8TE77 659 aa15.35■□□□□ 0.05
LINC00242-201ENST00000437615 ALDH1L1O75891 902 aa15.35■□□□□ 0.05
LINC00242-201ENST00000437615 C9orf78Q9NZ63 289 aaPredicted RBP15.35■□□□□ 0.05
LINC00242-201ENST00000437615 USP35Q9P2H5 1018 aa15.35■□□□□ 0.05
LINC00242-201ENST00000437615 SRGAP3O43295 1099 aa15.34■□□□□ 0.05
LINC00242-201ENST00000437615 CWF19L2Q2TBE0 894 aaKnown RBP15.34■□□□□ 0.05
LINC00242-201ENST00000437615 RIC3Q7Z5B4 369 aa15.34■□□□□ 0.05
LINC00242-201ENST00000437615 SIPA1L3O60292 1781 aaPredicted RBP15.33■□□□□ 0.05
LINC00242-201ENST00000437615 SURF6O75683 361 aaKnown RBP15.33■□□□□ 0.04
LINC00242-201ENST00000437615 IBTKQ9P2D0 1353 aaPredicted RBP15.33■□□□□ 0.04
LINC00242-201ENST00000437615 SDSP20132 328 aa15.33■□□□□ 0.04
LINC00242-201ENST00000437615 PDE1AP54750 535 aa15.33■□□□□ 0.04
LINC00242-201ENST00000437615 POLA2Q14181 598 aa15.33■□□□□ 0.04
LINC00242-201ENST00000437615 COPS6Q7L5N1 327 aa15.33■□□□□ 0.04
LINC00242-201ENST00000437615 LINS1Q8NG48 757 aa15.33■□□□□ 0.04
LINC00242-201ENST00000437615 OSBPL3Q9H4L5 887 aa15.33■□□□□ 0.04
LINC00242-201ENST00000437615 BTG4Q9NY30 223 aa15.33■□□□□ 0.04
LINC00242-201ENST00000437615 SCN11AQ9UI33 1791 aa15.32■□□□□ 0.04
LINC00242-201ENST00000437615 ERVV-2B6SEH9 535 aa15.32■□□□□ 0.04
LINC00242-201ENST00000437615 RBM25P49756 843 aaKnown RBP15.32■□□□□ 0.04
LINC00242-201ENST00000437615 XAGE3Q8WTP9 111 aa15.32■□□□□ 0.04
LINC00242-201ENST00000437615 NKX1-1Q15270 411 aaPredicted RBP15.32■□□□□ 0.04
LINC00242-201ENST00000437615 TBC1D2Q9BYX2 928 aa15.32■□□□□ 0.04
LINC00242-201ENST00000437615 PIP4K2AP48426 406 aaPredicted RBP15.31■□□□□ 0.04
LINC00242-201ENST00000437615 HDAC5Q9UQL6 1122 aa15.31■□□□□ 0.04
LINC00242-201ENST00000437615 RAB11FIP3O75154 756 aa15.31■□□□□ 0.04
LINC00242-201ENST00000437615 MRC1P22897 1456 aa15.3■□□□□ 0.04
LINC00242-201ENST00000437615 ANKRD13DQ6ZTN6 518 aa15.3■□□□□ 0.04
LINC00242-201ENST00000437615 PKD1L3Q7Z443 1732 aa15.3■□□□□ 0.04
LINC00242-201ENST00000437615 DEKP35659 375 aaKnown RBP15.29■□□□□ 0.04
LINC00242-201ENST00000437615 NEXNQ0ZGT2 675 aa15.29■□□□□ 0.04
LINC00242-201ENST00000437615 IL1RAPL2Q9NP60 686 aa15.29■□□□□ 0.04
LINC00242-201ENST00000437615 GRM8O00222 908 aa15.29■□□□□ 0.04
LINC00242-201ENST00000437615 EIF5BO60841 1220 aaKnown RBP15.29■□□□□ 0.04
LINC00242-201ENST00000437615 MX1P20591 662 aa15.29■□□□□ 0.04
LINC00242-201ENST00000437615 TSHZ3Q63HK5 1081 aa15.29■□□□□ 0.04
LINC00242-201ENST00000437615 IGKV5-2P06315 115 aa15.28■□□□□ 0.04
LINC00242-201ENST00000437615 NHSL1Q5SYE7 1610 aa15.28■□□□□ 0.04
LINC00242-201ENST00000437615 CASC1Q6TDU7 716 aa15.28■□□□□ 0.04
LINC00242-201ENST00000437615 LRP10Q7Z4F1 713 aa15.28■□□□□ 0.04
LINC00242-201ENST00000437615 SALL3Q9BXA9 1300 aa15.28■□□□□ 0.04
LINC00242-201ENST00000437615 RHPN1Q8TCX5 695 aa15.28■□□□□ 0.04
LINC00242-201ENST00000437615 METTL22Q9BUU2 404 aaPredicted RBP15.28■□□□□ 0.04
LINC00242-201ENST00000437615 MTX1Q13505 466 aa15.27■□□□□ 0.04
LINC00242-201ENST00000437615 MYD88Q99836 296 aa15.27■□□□□ 0.04
LINC00242-201ENST00000437615 PTCD1O75127 700 aaKnown RBP15.27■□□□□ 0.03
LINC00242-201ENST00000437615 HSP90AB4PQ58FF6 505 aa15.27■□□□□ 0.03
LINC00242-201ENST00000437615 KIF1BPQ96EK5 621 aa15.27■□□□□ 0.03
LINC00242-201ENST00000437615 NEURL1BA8MQ27 555 aa15.26■□□□□ 0.03
LINC00242-201ENST00000437615 RTL5Q5HYW3 569 aaPredicted RBP15.26■□□□□ 0.03
LINC00242-201ENST00000437615 NUTM1Q86Y26 1132 aa15.26■□□□□ 0.03
LINC00242-201ENST00000437615 STAP2Q9UGK3 403 aa15.26■□□□□ 0.03
LINC00242-201ENST00000437615 N4BP2Q86UW6 1770 aaPredicted RBP15.26■□□□□ 0.03
LINC00242-201ENST00000437615 UTYO14607 1347 aa15.26■□□□□ 0.03
LINC00242-201ENST00000437615 SUCLG2Q96I99 432 aa15.26■□□□□ 0.03
LINC00242-201ENST00000437615 OS9Q13438 667 aaPredicted RBP15.25■□□□□ 0.03
LINC00242-201ENST00000437615 GCKRQ14397 625 aa15.25■□□□□ 0.03
LINC00242-201ENST00000437615 KAZALD1Q96I82 304 aa15.25■□□□□ 0.03
LINC00242-201ENST00000437615 SLKQ9H2G2 1235 aaPredicted RBP15.25■□□□□ 0.03
LINC00242-201ENST00000437615 ABCA3Q99758 1704 aa15.25■□□□□ 0.03
LINC00242-201ENST00000437615 PARP4Q9UKK3 1724 aaKnown RBP15.25■□□□□ 0.03
LINC00242-201ENST00000437615 KIF2CQ99661 725 aa15.24■□□□□ 0.03
LINC00242-201ENST00000437615 BICC1Q9H694 974 aaKnown RBP15.24■□□□□ 0.03
LINC00242-201ENST00000437615 TMOD3Q9NYL9 352 aa15.24■□□□□ 0.03
LINC00242-201ENST00000437615 TRIM6-TRIM34B2RNG4 842 aa15.24■□□□□ 0.03
LINC00242-201ENST00000437615 NBPF26B4DH59 902 aa15.24■□□□□ 0.03
LINC00242-201ENST00000437615 NBPF14Q5TI25 921 aa15.24■□□□□ 0.03
LINC00242-201ENST00000437615 NBPF10Q6P3W6 841 aaKnown RBP15.24■□□□□ 0.03
LINC00242-201ENST00000437615 NBPF15Q8N660 670 aa15.24■□□□□ 0.03
LINC00242-201ENST00000437615 RILPL2Q969X0 211 aa15.24■□□□□ 0.03
LINC00242-201ENST00000437615 C5P01031 1676 aa15.23■□□□□ 0.03
LINC00242-201ENST00000437615 A1BGP04217 495 aa15.23■□□□□ 0.03
LINC00242-201ENST00000437615 HSCBQ8IWL3 235 aa15.23■□□□□ 0.03
LINC00242-201ENST00000437615 SPRYD3Q8NCJ5 442 aa15.23■□□□□ 0.03
LINC00242-201ENST00000437615 USP26Q9BXU7 913 aa15.23■□□□□ 0.03
LINC00242-201ENST00000437615 PA2G4Q9UQ80 394 aaKnown RBP15.23■□□□□ 0.03
LINC00242-201ENST00000437615 PLBD2Q8NHP8 589 aa15.23■□□□□ 0.03
LINC00242-201ENST00000437615 ERBB4Q15303 1308 aa15.22■□□□□ 0.03
LINC00242-201ENST00000437615 ATP5J2-PTCD1G3V325 749 aa15.22■□□□□ 0.03
LINC00242-201ENST00000437615 NFKBIBQ15653 356 aa15.22■□□□□ 0.03
LINC00242-201ENST00000437615 JARID2Q92833 1246 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 731.3 ms