RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 ZNF496Q96IT1 587 aaPredicted RBP11.94□□□□□ -0.5
CTDSPL-205ENST00000436654 C4AP0C0L4 1744 aa11.94□□□□□ -0.5
CTDSPL-205ENST00000436654 COL15A1P39059 1388 aa11.93□□□□□ -0.5
CTDSPL-205ENST00000436654 PPP2R1AP30153 589 aa11.93□□□□□ -0.5
CTDSPL-205ENST00000436654 CHRNA5P30532 468 aa11.93□□□□□ -0.5
CTDSPL-205ENST00000436654 ZNF790Q6PG37 636 aa11.93□□□□□ -0.5
CTDSPL-205ENST00000436654 RSPH6AQ9H0K4 717 aa11.93□□□□□ -0.5
CTDSPL-205ENST00000436654 NARFQ9UHQ1 456 aa11.93□□□□□ -0.5
CTDSPL-205ENST00000436654 SCN11AQ9UI33 1791 aa11.92□□□□□ -0.5
CTDSPL-205ENST00000436654 STARD3NLO95772 234 aa11.92□□□□□ -0.5
CTDSPL-205ENST00000436654 U2AF1L5P0DN76 240 aaPredicted RBP11.92□□□□□ -0.5
CTDSPL-205ENST00000436654 U2AF1Q01081 240 aaKnown RBP eCLIP11.92□□□□□ -0.5
CTDSPL-205ENST00000436654 NFIXQ14938 502 aa11.92□□□□□ -0.5
CTDSPL-205ENST00000436654 BCL2L12Q9HB09 334 aa11.92□□□□□ -0.5
CTDSPL-205ENST00000436654 PIM2Q9P1W9 311 aa11.92□□□□□ -0.5
CTDSPL-205ENST00000436654 NUDCQ9Y266 331 aa11.92□□□□□ -0.5
CTDSPL-205ENST00000436654 ZNF330Q9Y3S2 320 aaPredicted RBP11.92□□□□□ -0.5
CTDSPL-205ENST00000436654 MYH14Q7Z406 1995 aaKnown RBP11.91□□□□□ -0.5
CTDSPL-205ENST00000436654 KCNQ3O43525 872 aa11.91□□□□□ -0.5
CTDSPL-205ENST00000436654 DALRD3Q5D0E6 543 aaKnown RBP11.91□□□□□ -0.5
CTDSPL-205ENST00000436654 BICDL1Q6ZP65 573 aa11.91□□□□□ -0.5
CTDSPL-205ENST00000436654 HEG1Q9ULI3 1381 aa11.91□□□□□ -0.5
CTDSPL-205ENST00000436654 ADAMTS7Q9UKP4 1686 aa11.91□□□□□ -0.5
CTDSPL-205ENST00000436654 FMNL2Q96PY5 1086 aa11.9□□□□□ -0.5
CTDSPL-205ENST00000436654 KIAA1551Q9HCM1 1747 aa11.9□□□□□ -0.5
CTDSPL-205ENST00000436654 BTBD11A6QL63 1104 aa11.89□□□□□ -0.51
CTDSPL-205ENST00000436654 A1BGP04217 495 aa11.89□□□□□ -0.51
CTDSPL-205ENST00000436654 SERPINB2P05120 415 aa11.89□□□□□ -0.51
CTDSPL-205ENST00000436654 EIF5P55010 431 aaKnown RBP11.89□□□□□ -0.51
CTDSPL-205ENST00000436654 C9orf131Q5VYM1 1079 aa11.89□□□□□ -0.51
CTDSPL-205ENST00000436654 MCM10Q7L590 875 aa11.89□□□□□ -0.51
CTDSPL-205ENST00000436654 TBC1D2BQ9UPU7 963 aa11.89□□□□□ -0.51
CTDSPL-205ENST00000436654 N4BP2Q86UW6 1770 aaPredicted RBP11.89□□□□□ -0.51
CTDSPL-205ENST00000436654 CEMIPQ8WUJ3 1361 aa11.89□□□□□ -0.51
CTDSPL-205ENST00000436654 A0A087WZG4 1122 aa11.88□□□□□ -0.51
CTDSPL-205ENST00000436654 KIF3CO14782 793 aa11.88□□□□□ -0.51
CTDSPL-205ENST00000436654 DCTN1Q14203 1278 aa11.88□□□□□ -0.51
CTDSPL-205ENST00000436654 RTF1Q92541 710 aaKnown RBP11.88□□□□□ -0.51
CTDSPL-205ENST00000436654 TEX13AQ9BXU3 409 aaPredicted RBP11.88□□□□□ -0.51
CTDSPL-205ENST00000436654 PIP4K2AP48426 406 aaPredicted RBP11.87□□□□□ -0.51
CTDSPL-205ENST00000436654 APLP1P51693 650 aa11.87□□□□□ -0.51
CTDSPL-205ENST00000436654 TBC1D9BQ66K14 1250 aa11.87□□□□□ -0.51
CTDSPL-205ENST00000436654 KIF13BQ9NQT8 1826 aa11.87□□□□□ -0.51
CTDSPL-205ENST00000436654 PRAMEF22A3QJZ6 481 aa11.86□□□□□ -0.51
CTDSPL-205ENST00000436654 IL6STP40189 918 aaPredicted RBP11.86□□□□□ -0.51
CTDSPL-205ENST00000436654 NPM2Q86SE8 214 aaKnown RBP11.86□□□□□ -0.51
CTDSPL-205ENST00000436654 C2CD5Q86YS7 1000 aa11.86□□□□□ -0.51
CTDSPL-205ENST00000436654 CCDC24Q8N4L8 307 aa11.86□□□□□ -0.51
CTDSPL-205ENST00000436654 NMRK2Q9NPI5 230 aa11.86□□□□□ -0.51
CTDSPL-205ENST00000436654 RNF181Q9P0P0 153 aa11.86□□□□□ -0.51
CTDSPL-205ENST00000436654 CARMIL3Q8ND23 1372 aa11.86□□□□□ -0.51
CTDSPL-205ENST00000436654 RASSF7Q02833 373 aa11.85□□□□□ -0.51
CTDSPL-205ENST00000436654 USP16Q9Y5T5 823 aa11.85□□□□□ -0.51
CTDSPL-205ENST00000436654 H0YIN7 160 aa11.84□□□□□ -0.51
CTDSPL-205ENST00000436654 CAPN15O75808 1086 aa11.84□□□□□ -0.51
CTDSPL-205ENST00000436654 CAMTA2O94983 1202 aa11.84□□□□□ -0.51
CTDSPL-205ENST00000436654 TTLL6Q8N841 843 aa11.84□□□□□ -0.51
CTDSPL-205ENST00000436654 MIS18AQ9NYP9 233 aa11.84□□□□□ -0.51
CTDSPL-205ENST00000436654 UBR2Q8IWV8 1755 aa11.84□□□□□ -0.51
CTDSPL-205ENST00000436654 SNRPA1P09661 255 aaKnown RBP11.83□□□□□ -0.52
CTDSPL-205ENST00000436654 PRR5LQ6MZQ0 368 aa11.83□□□□□ -0.52
CTDSPL-205ENST00000436654 DZIP3Q86Y13 1208 aaKnown RBP11.83□□□□□ -0.52
CTDSPL-205ENST00000436654 ZNF219Q9P2Y4 722 aaPredicted RBP11.83□□□□□ -0.52
CTDSPL-205ENST00000436654 NPHP1O15259 732 aa11.82□□□□□ -0.52
CTDSPL-205ENST00000436654 HTATSF1O43719 755 aaKnown RBP11.82□□□□□ -0.52
CTDSPL-205ENST00000436654 ZNF622Q969S3 477 aaKnown RBP eCLIP11.82□□□□□ -0.52
CTDSPL-205ENST00000436654 SETDB2Q96T68 719 aa11.82□□□□□ -0.52
CTDSPL-205ENST00000436654 TOMM70O94826 608 aa11.81□□□□□ -0.52
CTDSPL-205ENST00000436654 NEFMP07197 916 aa11.81□□□□□ -0.52
CTDSPL-205ENST00000436654 PRELPP51888 382 aa11.81□□□□□ -0.52
CTDSPL-205ENST00000436654 TAF7Q15545 349 aaPredicted RBP11.81□□□□□ -0.52
CTDSPL-205ENST00000436654 CNBD1Q8NA66 436 aa11.81□□□□□ -0.52
CTDSPL-205ENST00000436654 BRIP1Q9BX63 1249 aa11.81□□□□□ -0.52
CTDSPL-205ENST00000436654 NBPF26B4DH59 902 aa11.8□□□□□ -0.52
CTDSPL-205ENST00000436654 PDE6BP35913 854 aa11.8□□□□□ -0.52
CTDSPL-205ENST00000436654 COL13A1Q5TAT6 717 aaPredicted RBP11.8□□□□□ -0.52
CTDSPL-205ENST00000436654 NBPF10Q6P3W6 841 aaKnown RBP11.8□□□□□ -0.52
CTDSPL-205ENST00000436654 C16orf71Q8IYS4 520 aaPredicted RBP11.8□□□□□ -0.52
CTDSPL-205ENST00000436654 TNS4Q8IZW8 715 aa11.8□□□□□ -0.52
CTDSPL-205ENST00000436654 NBPF15Q8N660 670 aa11.8□□□□□ -0.52
CTDSPL-205ENST00000436654 THUMPD2Q9BTF0 503 aaKnown RBP11.8□□□□□ -0.52
CTDSPL-205ENST00000436654 RRAGCQ9HB90 399 aa11.8□□□□□ -0.52
CTDSPL-205ENST00000436654 KDM2BQ8NHM5 1336 aa11.8□□□□□ -0.52
CTDSPL-205ENST00000436654 SIPA1L3O60292 1781 aaPredicted RBP11.79□□□□□ -0.52
CTDSPL-205ENST00000436654 NFKBIEO00221 500 aa11.79□□□□□ -0.52
CTDSPL-205ENST00000436654 C21orf2O43822 256 aa11.79□□□□□ -0.52
CTDSPL-205ENST00000436654 LMNB1P20700 586 aa11.79□□□□□ -0.52
CTDSPL-205ENST00000436654 ST5P78524 1137 aa11.79□□□□□ -0.52
CTDSPL-205ENST00000436654 NFE2L2Q16236 605 aa11.79□□□□□ -0.52
CTDSPL-205ENST00000436654 DNAJC5GQ8N7S2 189 aa11.79□□□□□ -0.52
CTDSPL-205ENST00000436654 PLEKHF1Q96S99 279 aa11.79□□□□□ -0.52
CTDSPL-205ENST00000436654 WDR90Q96KV7 1748 aa11.79□□□□□ -0.52
CTDSPL-205ENST00000436654 NRXN2Q9P2S2 1712 aa11.79□□□□□ -0.52
CTDSPL-205ENST00000436654 FAM177BA6PVY3 158 aa11.78□□□□□ -0.52
CTDSPL-205ENST00000436654 NBPF5PQ86XG9 351 aaPredicted RBP11.78□□□□□ -0.52
CTDSPL-205ENST00000436654 ZNF652Q9Y2D9 606 aa11.78□□□□□ -0.52
CTDSPL-205ENST00000436654 MAPK8IP3Q9UPT6 1336 aa11.78□□□□□ -0.52
CTDSPL-205ENST00000436654 BRCA1P38398 1863 aaKnown RBP11.78□□□□□ -0.52
CTDSPL-205ENST00000436654 SCN7AQ01118 1682 aa11.78□□□□□ -0.52
CTDSPL-205ENST00000436654 VIRMAQ69YN4 1812 aaKnown RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms