RNA–Protein interactions for RNA: ENST00000436493.2

SDHAP3-201, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene SDHAP3, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-201ENST00000436493 LMOD3Q0VAK6 560 aa28.28■■■□□ 2.12
SDHAP3-201ENST00000436493 NLGN1Q8N2Q7 840 aa28.28■■■□□ 2.12
SDHAP3-201ENST00000436493 THUMPD2Q9BTF0 503 aaKnown RBP28.27■■■□□ 2.12
SDHAP3-201ENST00000436493 NEUROD2Q15784 382 aa28.26■■■□□ 2.11
SDHAP3-201ENST00000436493 MIS18AQ9NYP9 233 aa28.26■■■□□ 2.11
SDHAP3-201ENST00000436493 ZBTB1Q9Y2K1 713 aa28.26■■■□□ 2.11
SDHAP3-201ENST00000436493 CANXP27824 592 aaKnown RBP28.25■■■□□ 2.11
SDHAP3-201ENST00000436493 RRP7AQ9Y3A4 280 aaKnown RBP28.25■■■□□ 2.11
SDHAP3-201ENST00000436493 SOS1Q07889 1333 aaPredicted RBP28.24■■■□□ 2.11
SDHAP3-201ENST00000436493 SNRPA1P09661 255 aaKnown RBP28.24■■■□□ 2.11
SDHAP3-201ENST00000436493 ZPR1O75312 459 aa28.23■■■□□ 2.11
SDHAP3-201ENST00000436493 GYS1P13807 737 aa28.23■■■□□ 2.11
SDHAP3-201ENST00000436493 SRP68Q9UHB9 627 aaKnown RBP28.22■■■□□ 2.11
SDHAP3-201ENST00000436493 USP42Q9H9J4 1324 aaKnown RBP28.21■■■□□ 2.11
SDHAP3-201ENST00000436493 MMP10P09238 476 aa28.21■■■□□ 2.11
SDHAP3-201ENST00000436493 CCDC184Q52MB2 194 aa28.2■■■□□ 2.1
SDHAP3-201ENST00000436493 NPM2Q86SE8 214 aaKnown RBP28.2■■■□□ 2.1
SDHAP3-201ENST00000436493 COL15A1P39059 1388 aa28.2■■■□□ 2.1
SDHAP3-201ENST00000436493 C4AP0C0L4 1744 aa28.19■■■□□ 2.1
SDHAP3-201ENST00000436493 A0A087WZG4 1122 aa28.19■■■□□ 2.1
SDHAP3-201ENST00000436493 CD2APQ9Y5K6 639 aa28.19■■■□□ 2.1
SDHAP3-201ENST00000436493 USP16Q9Y5T5 823 aa28.19■■■□□ 2.1
SDHAP3-201ENST00000436493 A1BGP04217 495 aa28.18■■■□□ 2.1
SDHAP3-201ENST00000436493 MRS2Q9HD23 443 aa28.18■■■□□ 2.1
SDHAP3-201ENST00000436493 EIF5P55010 431 aaKnown RBP28.17■■■□□ 2.1
SDHAP3-201ENST00000436493 NARFQ9UHQ1 456 aa28.17■■■□□ 2.1
SDHAP3-201ENST00000436493 ZNF330Q9Y3S2 320 aaPredicted RBP28.17■■■□□ 2.1
SDHAP3-201ENST00000436493 PRAMEF22A3QJZ6 481 aa28.16■■■□□ 2.1
SDHAP3-201ENST00000436493 IL6STP40189 918 aaPredicted RBP28.16■■■□□ 2.1
SDHAP3-201ENST00000436493 USPL1Q5W0Q7 1092 aa28.16■■■□□ 2.1
SDHAP3-201ENST00000436493 TSPYL4Q9UJ04 414 aa28.16■■■□□ 2.1
SDHAP3-201ENST00000436493 PARP3Q9Y6F1 533 aa28.16■■■□□ 2.1
SDHAP3-201ENST00000436493 FKBP8Q14318 412 aa28.15■■■□□ 2.1
SDHAP3-201ENST00000436493 NLGN2Q8NFZ4 835 aa28.15■■■□□ 2.1
SDHAP3-201ENST00000436493 BABAM1Q9NWV8 329 aa28.15■■■□□ 2.1
SDHAP3-201ENST00000436493 APAF1O14727 1248 aa28.14■■■□□ 2.1
SDHAP3-201ENST00000436493 EIF4A1P60842 406 aaKnown RBP28.14■■■□□ 2.1
SDHAP3-201ENST00000436493 TRIM35Q9UPQ4 493 aa28.14■■■□□ 2.1
SDHAP3-201ENST00000436493 KDM3BQ7LBC6 1761 aa28.13■■■□□ 2.09
SDHAP3-201ENST00000436493 GIGYF1O75420 1035 aaPredicted RBP28.1■■■□□ 2.09
SDHAP3-201ENST00000436493 GPR162Q16538 588 aa28.1■■■□□ 2.09
SDHAP3-201ENST00000436493 PELP1Q8IZL8 1130 aaKnown RBP28.1■■■□□ 2.09
SDHAP3-201ENST00000436493 LAS1LQ9Y4W2 734 aaKnown RBP28.1■■■□□ 2.09
SDHAP3-201ENST00000436493 PIP4K2AP48426 406 aaPredicted RBP28.09■■■□□ 2.09
SDHAP3-201ENST00000436493 TBC1D2BQ9UPU7 963 aa28.09■■■□□ 2.09
SDHAP3-201ENST00000436493 TM4SF1P30408 202 aa28.07■■■□□ 2.08
SDHAP3-201ENST00000436493 BCL2L12Q9HB09 334 aa28.06■■■□□ 2.08
SDHAP3-201ENST00000436493 CHL1O00533 1208 aa28.05■■■□□ 2.08
SDHAP3-201ENST00000436493 DDR1Q08345 913 aa28.05■■■□□ 2.08
SDHAP3-201ENST00000436493 DZIP3Q86Y13 1208 aaKnown RBP28.05■■■□□ 2.08
SDHAP3-201ENST00000436493 NBPF26B4DH59 902 aa28.04■■■□□ 2.08
SDHAP3-201ENST00000436493 CALD1Q05682 793 aaKnown RBP28.04■■■□□ 2.08
SDHAP3-201ENST00000436493 NFIXQ14938 502 aa28.04■■■□□ 2.08
SDHAP3-201ENST00000436493 NBPF10Q6P3W6 841 aaKnown RBP28.04■■■□□ 2.08
SDHAP3-201ENST00000436493 NBPF15Q8N660 670 aa28.04■■■□□ 2.08
SDHAP3-201ENST00000436493 POLRMTO00411 1230 aaKnown RBP28.03■■■□□ 2.08
SDHAP3-201ENST00000436493 LAMB4A4D0S4 1761 aa28.02■■■□□ 2.08
SDHAP3-201ENST00000436493 BICDL1Q6ZP65 573 aa28.02■■■□□ 2.08
SDHAP3-201ENST00000436493 TGFB2P61812 414 aa28.01■■■□□ 2.07
SDHAP3-201ENST00000436493 CFAP44Q96MT7 982 aa28.01■■■□□ 2.07
SDHAP3-201ENST00000436493 CAMTA2O94983 1202 aa28■■■□□ 2.07
SDHAP3-201ENST00000436493 C10orf71Q711Q0 1435 aa28■■■□□ 2.07
SDHAP3-201ENST00000436493 EIF2S2P20042 333 aaKnown RBP27.99■■■□□ 2.07
SDHAP3-201ENST00000436493 SERPINB2P05120 415 aa27.98■■■□□ 2.07
SDHAP3-201ENST00000436493 TBC1D9BQ66K14 1250 aa27.98■■■□□ 2.07
SDHAP3-201ENST00000436493 NGEFQ8N5V2 710 aa27.98■■■□□ 2.07
SDHAP3-201ENST00000436493 ZNF652Q9Y2D9 606 aa27.98■■■□□ 2.07
SDHAP3-201ENST00000436493 ERBB4Q15303 1308 aa27.97■■■□□ 2.07
SDHAP3-201ENST00000436493 GRIN3BO60391 1043 aa27.97■■■□□ 2.07
SDHAP3-201ENST00000436493 MYL6BP14649 208 aa27.97■■■□□ 2.07
SDHAP3-201ENST00000436493 GNAI1P63096 354 aa27.97■■■□□ 2.07
SDHAP3-201ENST00000436493 FAM9BQ8IZU0 186 aa27.96■■■□□ 2.07
SDHAP3-201ENST00000436493 IFT57Q9NWB7 429 aa27.96■■■□□ 2.07
SDHAP3-201ENST00000436493 KIF13BQ9NQT8 1826 aa27.96■■■□□ 2.07
SDHAP3-201ENST00000436493 SCN7AQ01118 1682 aa27.96■■■□□ 2.07
SDHAP3-201ENST00000436493 A0A0G2JLW4 131 aa27.95■■■□□ 2.06
SDHAP3-201ENST00000436493 YBX3P16989 372 aaKnown RBP eCLIP27.95■■■□□ 2.06
SDHAP3-201ENST00000436493 CLEC4GQ6UXB4 293 aa27.95■■■□□ 2.06
SDHAP3-201ENST00000436493 SETDB2Q96T68 719 aa27.95■■■□□ 2.06
SDHAP3-201ENST00000436493 SENP3-EIF4A1A0A087X0R7 540 aa27.94■■■□□ 2.06
SDHAP3-201ENST00000436493 MBIPQ9NS73 344 aa27.94■■■□□ 2.06
SDHAP3-201ENST00000436493 WWC3Q9ULE0 1092 aa27.94■■■□□ 2.06
SDHAP3-201ENST00000436493 ZNF853P0CG23 659 aa27.93■■■□□ 2.06
SDHAP3-201ENST00000436493 DPEP1P16444 411 aa27.93■■■□□ 2.06
SDHAP3-201ENST00000436493 CCDC27Q2M243 656 aa27.93■■■□□ 2.06
SDHAP3-201ENST00000436493 PXDNLA1KZ92 1463 aa27.93■■■□□ 2.06
SDHAP3-201ENST00000436493 CARMIL3Q8ND23 1372 aa27.92■■■□□ 2.06
SDHAP3-201ENST00000436493 RGL2O15211 777 aa27.92■■■□□ 2.06
SDHAP3-201ENST00000436493 YY1P25490 414 aa27.92■■■□□ 2.06
SDHAP3-201ENST00000436493 KRT24Q2M2I5 525 aa27.92■■■□□ 2.06
SDHAP3-201ENST00000436493 KIF6Q6ZMV9 814 aa27.92■■■□□ 2.06
SDHAP3-201ENST00000436493 NECTIN2Q92692 538 aa27.91■■■□□ 2.06
SDHAP3-201ENST00000436493 NPHP1O15259 732 aa27.9■■■□□ 2.06
SDHAP3-201ENST00000436493 NCBP3Q53F19 620 aaKnown RBP27.9■■■□□ 2.06
SDHAP3-201ENST00000436493 BCORQ6W2J9 1755 aa27.9■■■□□ 2.06
SDHAP3-201ENST00000436493 AFDNP55196 1824 aaKnown RBP27.9■■■□□ 2.06
SDHAP3-201ENST00000436493 N4BP2Q86UW6 1770 aaPredicted RBP27.89■■■□□ 2.06
SDHAP3-201ENST00000436493 HOXB7P09629 217 aa27.89■■■□□ 2.06
SDHAP3-201ENST00000436493 WWC1Q8IX03 1113 aa27.89■■■□□ 2.06
SDHAP3-201ENST00000436493 ERVV-1B6SEH8 477 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms