RNA–Protein interactions for RNA: ENST00000435437.2

RPE-207, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-207ENST00000435437 DDR1Q08345 913 aa11.8□□□□□ -0.52
RPE-207ENST00000435437 FKBP8Q14318 412 aa11.8□□□□□ -0.52
RPE-207ENST00000435437 THUMPD2Q9BTF0 503 aaKnown RBP11.8□□□□□ -0.52
RPE-207ENST00000435437 PRKRIP1Q9H875 184 aaPredicted RBP11.8□□□□□ -0.52
RPE-207ENST00000435437 RTCBQ9Y3I0 505 aaKnown RBP11.8□□□□□ -0.52
RPE-207ENST00000435437 MYBBP1AQ9BQG0 1328 aaKnown RBP11.8□□□□□ -0.52
RPE-207ENST00000435437 LAMB4A4D0S4 1761 aa11.79□□□□□ -0.52
RPE-207ENST00000435437 C10orf71Q711Q0 1435 aa11.79□□□□□ -0.52
RPE-207ENST00000435437 PXDNLA1KZ92 1463 aa11.79□□□□□ -0.52
RPE-207ENST00000435437 POLD1P28340 1107 aa11.79□□□□□ -0.52
RPE-207ENST00000435437 TRAPPC3LQ5T215 181 aa11.79□□□□□ -0.52
RPE-207ENST00000435437 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
RPE-207ENST00000435437 CCDC87Q9NVE4 849 aa11.79□□□□□ -0.52
RPE-207ENST00000435437 USP16Q9Y5T5 823 aa11.79□□□□□ -0.52
RPE-207ENST00000435437 MMP10P09238 476 aa11.78□□□□□ -0.52
RPE-207ENST00000435437 TM4SF1P30408 202 aa11.78□□□□□ -0.52
RPE-207ENST00000435437 MIS18AQ9NYP9 233 aa11.78□□□□□ -0.52
RPE-207ENST00000435437 ANKRD31Q8N7Z5 1873 aa11.78□□□□□ -0.52
RPE-207ENST00000435437 GOLGB1Q14789 3259 aaKnown RBP11.77□□□□□ -0.52
RPE-207ENST00000435437 A1BGP04217 495 aa11.77□□□□□ -0.53
RPE-207ENST00000435437 PIP4K2AP48426 406 aaPredicted RBP11.77□□□□□ -0.53
RPE-207ENST00000435437 EIF5P55010 431 aaKnown RBP11.77□□□□□ -0.53
RPE-207ENST00000435437 NFE2L2Q16236 605 aa11.77□□□□□ -0.53
RPE-207ENST00000435437 KLHL34Q8N239 644 aa11.77□□□□□ -0.53
RPE-207ENST00000435437 COL15A1P39059 1388 aa11.77□□□□□ -0.53
RPE-207ENST00000435437 BTBD11A6QL63 1104 aa11.76□□□□□ -0.53
RPE-207ENST00000435437 NBPF26B4DH59 902 aa11.76□□□□□ -0.53
RPE-207ENST00000435437 HTATSF1O43719 755 aaKnown RBP11.76□□□□□ -0.53
RPE-207ENST00000435437 TEFQ10587 303 aa11.76□□□□□ -0.53
RPE-207ENST00000435437 USPL1Q5W0Q7 1092 aa11.76□□□□□ -0.53
RPE-207ENST00000435437 NBPF10Q6P3W6 841 aaKnown RBP11.76□□□□□ -0.53
RPE-207ENST00000435437 NBPF15Q8N660 670 aa11.76□□□□□ -0.53
RPE-207ENST00000435437 CD2APQ9Y5K6 639 aa11.76□□□□□ -0.53
RPE-207ENST00000435437 POLRMTO00411 1230 aaKnown RBP11.75□□□□□ -0.53
RPE-207ENST00000435437 KCNA3P22001 575 aa11.75□□□□□ -0.53
RPE-207ENST00000435437 DLEC1Q9Y238 1755 aa11.74□□□□□ -0.53
RPE-207ENST00000435437 CANXP27824 592 aaKnown RBP11.74□□□□□ -0.53
RPE-207ENST00000435437 RFC4P35249 363 aa11.74□□□□□ -0.53
RPE-207ENST00000435437 TMPOP42166 694 aaKnown RBP11.74□□□□□ -0.53
RPE-207ENST00000435437 CCDC146Q8IYE0 955 aa11.74□□□□□ -0.53
RPE-207ENST00000435437 NARFQ9UHQ1 456 aa11.74□□□□□ -0.53
RPE-207ENST00000435437 WWC3Q9ULE0 1092 aa11.74□□□□□ -0.53
RPE-207ENST00000435437 ADAMTS8Q9UP79 889 aa11.74□□□□□ -0.53
RPE-207ENST00000435437 TRIM35Q9UPQ4 493 aa11.74□□□□□ -0.53
RPE-207ENST00000435437 CARMIL3Q8ND23 1372 aa11.74□□□□□ -0.53
RPE-207ENST00000435437 COL11A2P13942 1736 aaPredicted RBP11.74□□□□□ -0.53
RPE-207ENST00000435437 HMGB2P26583 209 aaKnown RBP11.73□□□□□ -0.53
RPE-207ENST00000435437 NFIXQ14938 502 aa11.73□□□□□ -0.53
RPE-207ENST00000435437 TAF7Q15545 349 aaPredicted RBP11.73□□□□□ -0.53
RPE-207ENST00000435437 NLGN1Q8N2Q7 840 aa11.73□□□□□ -0.53
RPE-207ENST00000435437 FMNL2Q96PY5 1086 aa11.73□□□□□ -0.53
RPE-207ENST00000435437 RRP7AQ9Y3A4 280 aaKnown RBP11.73□□□□□ -0.53
RPE-207ENST00000435437 ARFGEF1Q9Y6D6 1849 aa11.72□□□□□ -0.53
RPE-207ENST00000435437 YY1P25490 414 aa11.72□□□□□ -0.53
RPE-207ENST00000435437 DSG3P32926 999 aa11.72□□□□□ -0.53
RPE-207ENST00000435437 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
RPE-207ENST00000435437 EIF4A1P60842 406 aaKnown RBP11.72□□□□□ -0.53
RPE-207ENST00000435437 LRP10Q7Z4F1 713 aa11.72□□□□□ -0.53
RPE-207ENST00000435437 TTC5Q8N0Z6 440 aa11.72□□□□□ -0.53
RPE-207ENST00000435437 ZNF316A6NFI3 1004 aaPredicted RBP11.71□□□□□ -0.53
RPE-207ENST00000435437 CAMTA2O94983 1202 aa11.71□□□□□ -0.53
RPE-207ENST00000435437 TBC1D9BQ66K14 1250 aa11.71□□□□□ -0.53
RPE-207ENST00000435437 TBC1D2BQ9UPU7 963 aa11.71□□□□□ -0.53
RPE-207ENST00000435437 A0A0G2JLW4 131 aa11.7□□□□□ -0.54
RPE-207ENST00000435437 GIGYF1O75420 1035 aaPredicted RBP11.7□□□□□ -0.54
RPE-207ENST00000435437 DPEP1P16444 411 aa11.7□□□□□ -0.54
RPE-207ENST00000435437 IL6STP40189 918 aaPredicted RBP11.7□□□□□ -0.54
RPE-207ENST00000435437 RIPK4P57078 832 aa11.7□□□□□ -0.54
RPE-207ENST00000435437 GPR162Q16538 588 aa11.7□□□□□ -0.54
RPE-207ENST00000435437 RTF1Q92541 710 aaKnown RBP11.7□□□□□ -0.54
RPE-207ENST00000435437 NUP98P52948 1817 aa11.7□□□□□ -0.54
RPE-207ENST00000435437 SNRPA1P09661 255 aaKnown RBP11.69□□□□□ -0.54
RPE-207ENST00000435437 KRT24Q2M2I5 525 aa11.69□□□□□ -0.54
RPE-207ENST00000435437 ADCY9O60503 1353 aa11.68□□□□□ -0.54
RPE-207ENST00000435437 STARD3NLO95772 234 aa11.68□□□□□ -0.54
RPE-207ENST00000435437 CHRNA5P30532 468 aa11.68□□□□□ -0.54
RPE-207ENST00000435437 PDIA6Q15084 440 aa11.68□□□□□ -0.54
RPE-207ENST00000435437 PELP1Q8IZL8 1130 aaKnown RBP11.68□□□□□ -0.54
RPE-207ENST00000435437 RUNDC1Q96C34 613 aa11.68□□□□□ -0.54
RPE-207ENST00000435437 TEX13AQ9BXU3 409 aaPredicted RBP11.68□□□□□ -0.54
RPE-207ENST00000435437 TNRC6CQ9HCJ0 1690 aaKnown RBP11.68□□□□□ -0.54
RPE-207ENST00000435437 SBF1O95248 1867 aa11.68□□□□□ -0.54
RPE-207ENST00000435437 CHL1O00533 1208 aa11.67□□□□□ -0.54
RPE-207ENST00000435437 SERPINB2P05120 415 aa11.67□□□□□ -0.54
RPE-207ENST00000435437 TGFB2P61812 414 aa11.67□□□□□ -0.54
RPE-207ENST00000435437 HLFQ16534 295 aa11.67□□□□□ -0.54
RPE-207ENST00000435437 CCDC24Q8N4L8 307 aa11.67□□□□□ -0.54
RPE-207ENST00000435437 ZNF784Q8NCA9 323 aaPredicted RBP11.67□□□□□ -0.54
RPE-207ENST00000435437 PARP3Q9Y6F1 533 aa11.67□□□□□ -0.54
RPE-207ENST00000435437 MAPK8IP3Q9UPT6 1336 aa11.66□□□□□ -0.54
RPE-207ENST00000435437 ZPR1O75312 459 aa11.66□□□□□ -0.54
RPE-207ENST00000435437 PRELPP51888 382 aa11.66□□□□□ -0.54
RPE-207ENST00000435437 PROSER3Q2NL68 480 aa11.66□□□□□ -0.54
RPE-207ENST00000435437 CACNA1SQ13698 1873 aa11.66□□□□□ -0.54
RPE-207ENST00000435437 SENP3-EIF4A1A0A087X0R7 540 aa11.65□□□□□ -0.54
RPE-207ENST00000435437 ZNF853P0CG23 659 aa11.65□□□□□ -0.54
RPE-207ENST00000435437 NEUROD2Q15784 382 aa11.65□□□□□ -0.54
RPE-207ENST00000435437 PRR5LQ6MZQ0 368 aa11.65□□□□□ -0.54
RPE-207ENST00000435437 BICDL1Q6ZP65 573 aa11.65□□□□□ -0.54
RPE-207ENST00000435437 TTLL7Q6ZT98 887 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms