RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 COL15A1P39059 1388 aa17.6■□□□□ 0.41
CDCA4P4-201ENST00000435216 SIPA1L3O60292 1781 aaPredicted RBP17.6■□□□□ 0.41
CDCA4P4-201ENST00000435216 KCNA3P22001 575 aa17.59■□□□□ 0.41
CDCA4P4-201ENST00000435216 CANXP27824 592 aaKnown RBP17.59■□□□□ 0.41
CDCA4P4-201ENST00000435216 CFAP53Q96M91 514 aa17.59■□□□□ 0.41
CDCA4P4-201ENST00000435216 POLRMTO00411 1230 aaKnown RBP17.58■□□□□ 0.4
CDCA4P4-201ENST00000435216 PPP2R1AP30153 589 aa17.58■□□□□ 0.4
CDCA4P4-201ENST00000435216 TM4SF1P30408 202 aa17.58■□□□□ 0.4
CDCA4P4-201ENST00000435216 CHRNA5P30532 468 aa17.58■□□□□ 0.4
CDCA4P4-201ENST00000435216 ARHGAP27Q6ZUM4 889 aa17.58■□□□□ 0.4
CDCA4P4-201ENST00000435216 ZNF496Q96IT1 587 aaPredicted RBP17.58■□□□□ 0.4
CDCA4P4-201ENST00000435216 RSPH6AQ9H0K4 717 aa17.58■□□□□ 0.4
CDCA4P4-201ENST00000435216 VSIG10Q8N0Z9 540 aa17.57■□□□□ 0.4
CDCA4P4-201ENST00000435216 NARFQ9UHQ1 456 aa17.57■□□□□ 0.4
CDCA4P4-201ENST00000435216 AFDNP55196 1824 aaKnown RBP17.56■□□□□ 0.4
CDCA4P4-201ENST00000435216 NFIXQ14938 502 aa17.56■□□□□ 0.4
CDCA4P4-201ENST00000435216 ZNF790Q6PG37 636 aa17.56■□□□□ 0.4
CDCA4P4-201ENST00000435216 BCL2L12Q9HB09 334 aa17.56■□□□□ 0.4
CDCA4P4-201ENST00000435216 KCNQ3O43525 872 aa17.55■□□□□ 0.4
CDCA4P4-201ENST00000435216 U2AF1L5P0DN76 240 aaPredicted RBP17.55■□□□□ 0.4
CDCA4P4-201ENST00000435216 U2AF1Q01081 240 aaKnown RBP eCLIP17.55■□□□□ 0.4
CDCA4P4-201ENST00000435216 PIM2Q9P1W9 311 aa17.55■□□□□ 0.4
CDCA4P4-201ENST00000435216 ZNF330Q9Y3S2 320 aaPredicted RBP17.55■□□□□ 0.4
CDCA4P4-201ENST00000435216 ARFGEF1Q9Y6D6 1849 aa17.55■□□□□ 0.4
CDCA4P4-201ENST00000435216 HEG1Q9ULI3 1381 aa17.54■□□□□ 0.4
CDCA4P4-201ENST00000435216 STARD3NLO95772 234 aa17.54■□□□□ 0.4
CDCA4P4-201ENST00000435216 NUDCQ9Y266 331 aa17.54■□□□□ 0.4
CDCA4P4-201ENST00000435216 CEMIPQ8WUJ3 1361 aa17.53■□□□□ 0.4
CDCA4P4-201ENST00000435216 DALRD3Q5D0E6 543 aaKnown RBP17.53■□□□□ 0.4
CDCA4P4-201ENST00000435216 BICDL1Q6ZP65 573 aa17.53■□□□□ 0.4
CDCA4P4-201ENST00000435216 BTBD11A6QL63 1104 aa17.52■□□□□ 0.4
CDCA4P4-201ENST00000435216 EIF5P55010 431 aaKnown RBP17.52■□□□□ 0.4
CDCA4P4-201ENST00000435216 MCM10Q7L590 875 aa17.52■□□□□ 0.4
CDCA4P4-201ENST00000435216 NRXN2Q9P2S2 1712 aa17.52■□□□□ 0.39
CDCA4P4-201ENST00000435216 SERPINB2P05120 415 aa17.51■□□□□ 0.39
CDCA4P4-201ENST00000435216 DCTN1Q14203 1278 aa17.51■□□□□ 0.39
CDCA4P4-201ENST00000435216 FMNL2Q96PY5 1086 aa17.51■□□□□ 0.39
CDCA4P4-201ENST00000435216 CARMIL3Q8ND23 1372 aa17.51■□□□□ 0.39
CDCA4P4-201ENST00000435216 KIF3CO14782 793 aa17.5■□□□□ 0.39
CDCA4P4-201ENST00000435216 A1BGP04217 495 aa17.5■□□□□ 0.39
CDCA4P4-201ENST00000435216 PIP4K2AP48426 406 aaPredicted RBP17.5■□□□□ 0.39
CDCA4P4-201ENST00000435216 TBC1D2BQ9UPU7 963 aa17.5■□□□□ 0.39
CDCA4P4-201ENST00000435216 CEP350Q5VT06 3117 aa17.5■□□□□ 0.39
CDCA4P4-201ENST00000435216 SCN7AQ01118 1682 aa17.49■□□□□ 0.39
CDCA4P4-201ENST00000435216 PRAMEF22A3QJZ6 481 aa17.49■□□□□ 0.39
CDCA4P4-201ENST00000435216 C9orf131Q5VYM1 1079 aa17.49■□□□□ 0.39
CDCA4P4-201ENST00000435216 TBC1D9BQ66K14 1250 aa17.49■□□□□ 0.39
CDCA4P4-201ENST00000435216 TEX13AQ9BXU3 409 aaPredicted RBP17.49■□□□□ 0.39
CDCA4P4-201ENST00000435216 A0A087WZG4 1122 aa17.48■□□□□ 0.39
CDCA4P4-201ENST00000435216 CCDC24Q8N4L8 307 aa17.48■□□□□ 0.39
CDCA4P4-201ENST00000435216 RTF1Q92541 710 aaKnown RBP17.48■□□□□ 0.39
CDCA4P4-201ENST00000435216 USP16Q9Y5T5 823 aa17.47■□□□□ 0.39
CDCA4P4-201ENST00000435216 DLEC1Q9Y238 1755 aa17.47■□□□□ 0.39
CDCA4P4-201ENST00000435216 IL6STP40189 918 aaPredicted RBP17.46■□□□□ 0.39
CDCA4P4-201ENST00000435216 NMRK2Q9NPI5 230 aa17.46■□□□□ 0.39
CDCA4P4-201ENST00000435216 RNF181Q9P0P0 153 aa17.46■□□□□ 0.39
CDCA4P4-201ENST00000435216 ANKRD31Q8N7Z5 1873 aa17.46■□□□□ 0.38
CDCA4P4-201ENST00000435216 RASSF7Q02833 373 aa17.45■□□□□ 0.38
CDCA4P4-201ENST00000435216 C2CD5Q86YS7 1000 aa17.45■□□□□ 0.38
CDCA4P4-201ENST00000435216 SBF1O95248 1867 aa17.44■□□□□ 0.38
CDCA4P4-201ENST00000435216 NPM2Q86SE8 214 aaKnown RBP17.44■□□□□ 0.38
CDCA4P4-201ENST00000435216 MIS18AQ9NYP9 233 aa17.44■□□□□ 0.38
CDCA4P4-201ENST00000435216 BCORQ6W2J9 1755 aa17.43■□□□□ 0.38
CDCA4P4-201ENST00000435216 DLG5Q8TDM6 1919 aa17.43■□□□□ 0.38
CDCA4P4-201ENST00000435216 CAMTA2O94983 1202 aa17.43■□□□□ 0.38
CDCA4P4-201ENST00000435216 HSPA6P17066 643 aa17.43■□□□□ 0.38
CDCA4P4-201ENST00000435216 PRR5LQ6MZQ0 368 aa17.43■□□□□ 0.38
CDCA4P4-201ENST00000435216 DZIP3Q86Y13 1208 aaKnown RBP17.43■□□□□ 0.38
CDCA4P4-201ENST00000435216 COL11A2P13942 1736 aaPredicted RBP17.42■□□□□ 0.38
CDCA4P4-201ENST00000435216 H0YIN7 160 aa17.42■□□□□ 0.38
CDCA4P4-201ENST00000435216 TTLL6Q8N841 843 aa17.42■□□□□ 0.38
CDCA4P4-201ENST00000435216 SNRPA1P09661 255 aaKnown RBP17.41■□□□□ 0.38
CDCA4P4-201ENST00000435216 PRELPP51888 382 aa17.41■□□□□ 0.38
CDCA4P4-201ENST00000435216 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
CDCA4P4-201ENST00000435216 HTATSF1O43719 755 aaKnown RBP17.4■□□□□ 0.38
CDCA4P4-201ENST00000435216 TAF7Q15545 349 aaPredicted RBP17.4■□□□□ 0.38
CDCA4P4-201ENST00000435216 ZNF622Q969S3 477 aaKnown RBP eCLIP17.4■□□□□ 0.38
CDCA4P4-201ENST00000435216 SETDB2Q96T68 719 aa17.4■□□□□ 0.38
CDCA4P4-201ENST00000435216 NBPF26B4DH59 902 aa17.39■□□□□ 0.37
CDCA4P4-201ENST00000435216 NPHP1O15259 732 aa17.39■□□□□ 0.37
CDCA4P4-201ENST00000435216 TOMM70O94826 608 aa17.39■□□□□ 0.37
CDCA4P4-201ENST00000435216 NBPF10Q6P3W6 841 aaKnown RBP17.39■□□□□ 0.37
CDCA4P4-201ENST00000435216 NBPF15Q8N660 670 aa17.39■□□□□ 0.37
CDCA4P4-201ENST00000435216 THUMPD2Q9BTF0 503 aaKnown RBP17.39■□□□□ 0.37
CDCA4P4-201ENST00000435216 CACNA1SQ13698 1873 aa17.38■□□□□ 0.37
CDCA4P4-201ENST00000435216 CCDC88AQ3V6T2 1871 aa17.38■□□□□ 0.37
CDCA4P4-201ENST00000435216 NEFMP07197 916 aa17.38■□□□□ 0.37
CDCA4P4-201ENST00000435216 PDE6BP35913 854 aa17.38■□□□□ 0.37
CDCA4P4-201ENST00000435216 CNBD1Q8NA66 436 aa17.38■□□□□ 0.37
CDCA4P4-201ENST00000435216 PLEKHF1Q96S99 279 aa17.38■□□□□ 0.37
CDCA4P4-201ENST00000435216 BRIP1Q9BX63 1249 aa17.38■□□□□ 0.37
CDCA4P4-201ENST00000435216 NFKBIEO00221 500 aa17.37■□□□□ 0.37
CDCA4P4-201ENST00000435216 RRAGCQ9HB90 399 aa17.37■□□□□ 0.37
CDCA4P4-201ENST00000435216 LAMB4A4D0S4 1761 aa17.37■□□□□ 0.37
CDCA4P4-201ENST00000435216 KDM3BQ7LBC6 1761 aa17.37■□□□□ 0.37
CDCA4P4-201ENST00000435216 TIAM2Q8IVF5 1701 aa17.36■□□□□ 0.37
CDCA4P4-201ENST00000435216 C21orf2O43822 256 aa17.36■□□□□ 0.37
CDCA4P4-201ENST00000435216 LMNB1P20700 586 aa17.36■□□□□ 0.37
CDCA4P4-201ENST00000435216 KDM2BQ8NHM5 1336 aa17.36■□□□□ 0.37
CDCA4P4-201ENST00000435216 ST5P78524 1137 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms