RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 MCTP2Q6DN12 878 aa8.72□□□□□ -1.01
GARNL3-205ENST00000435213 KIF2CQ99661 725 aa8.72□□□□□ -1.01
GARNL3-205ENST00000435213 SART3Q15020 963 aaKnown RBP8.72□□□□□ -1.01
GARNL3-205ENST00000435213 JAKMIP3Q5VZ66 844 aa8.72□□□□□ -1.01
GARNL3-205ENST00000435213 CHD1LQ86WJ1 897 aa8.72□□□□□ -1.01
GARNL3-205ENST00000435213 SUGP1Q8IWZ8 645 aaKnown RBP8.72□□□□□ -1.01
GARNL3-205ENST00000435213 POLKQ9UBT6 870 aa8.72□□□□□ -1.01
GARNL3-205ENST00000435213 CD109Q6YHK3 1445 aa8.71□□□□□ -1.01
GARNL3-205ENST00000435213 ANKRD36BQ8N2N9 1353 aa8.71□□□□□ -1.01
GARNL3-205ENST00000435213 COQ9O75208 318 aa8.71□□□□□ -1.01
GARNL3-205ENST00000435213 EXOSC9Q06265 439 aaKnown RBP8.71□□□□□ -1.01
GARNL3-205ENST00000435213 SSH1Q8WYL5 1049 aa8.71□□□□□ -1.01
GARNL3-205ENST00000435213 TSPAN18Q96SJ8 248 aa8.71□□□□□ -1.01
GARNL3-205ENST00000435213 CEP89Q96ST8 783 aa8.71□□□□□ -1.01
GARNL3-205ENST00000435213 AK9Q5TCS8 1911 aa8.71□□□□□ -1.01
GARNL3-205ENST00000435213 POLD1P28340 1107 aa8.71□□□□□ -1.02
GARNL3-205ENST00000435213 PIK3R5Q8WYR1 880 aa8.71□□□□□ -1.02
GARNL3-205ENST00000435213 CCDC97Q96F63 343 aaPredicted RBP8.71□□□□□ -1.02
GARNL3-205ENST00000435213 IRX1P78414 480 aaPredicted RBP8.71□□□□□ -1.02
GARNL3-205ENST00000435213 SYT10Q6XYQ8 523 aa8.71□□□□□ -1.02
GARNL3-205ENST00000435213 TMEM57Q8N5G2 664 aa8.71□□□□□ -1.02
GARNL3-205ENST00000435213 RIOK3O14730 519 aaKnown RBP8.7□□□□□ -1.02
GARNL3-205ENST00000435213 U2AF1L5P0DN76 240 aaPredicted RBP8.7□□□□□ -1.02
GARNL3-205ENST00000435213 U2AF1Q01081 240 aaKnown RBP eCLIP8.7□□□□□ -1.02
GARNL3-205ENST00000435213 ALDH1L2Q3SY69 923 aa8.7□□□□□ -1.02
GARNL3-205ENST00000435213 GCC1Q96CN9 775 aa8.7□□□□□ -1.02
GARNL3-205ENST00000435213 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.7□□□□□ -1.02
GARNL3-205ENST00000435213 CDC42BPGQ6DT37 1551 aa8.7□□□□□ -1.02
GARNL3-205ENST00000435213 HECW2Q9P2P5 1572 aa8.7□□□□□ -1.02
GARNL3-205ENST00000435213 MAP9Q49MG5 647 aa8.7□□□□□ -1.02
GARNL3-205ENST00000435213 NOB1Q9ULX3 412 aaKnown RBP8.7□□□□□ -1.02
GARNL3-205ENST00000435213 TULP4Q9NRJ4 1543 aa8.7□□□□□ -1.02
GARNL3-205ENST00000435213 BAG4O95429 457 aaKnown RBP8.69□□□□□ -1.02
GARNL3-205ENST00000435213 ZSCAN26Q16670 478 aa8.69□□□□□ -1.02
GARNL3-205ENST00000435213 TSR2Q969E8 191 aaKnown RBP8.69□□□□□ -1.02
GARNL3-205ENST00000435213 TACO1Q9BSH4 297 aaKnown RBP8.69□□□□□ -1.02
GARNL3-205ENST00000435213 SPTLC3Q9NUV7 552 aa8.69□□□□□ -1.02
GARNL3-205ENST00000435213 SSFA2P28290 1259 aa8.69□□□□□ -1.02
GARNL3-205ENST00000435213 MKL1Q969V6 931 aa8.69□□□□□ -1.02
GARNL3-205ENST00000435213 ZNF428Q96B54 188 aa8.69□□□□□ -1.02
GARNL3-205ENST00000435213 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.69□□□□□ -1.02
GARNL3-205ENST00000435213 TMPOP42166 694 aaKnown RBP8.69□□□□□ -1.02
GARNL3-205ENST00000435213 ZRSR2Q15696 482 aaKnown RBP8.69□□□□□ -1.02
GARNL3-205ENST00000435213 PLEKHF1Q96S99 279 aa8.69□□□□□ -1.02
GARNL3-205ENST00000435213 LNPKQ9C0E8 428 aa8.69□□□□□ -1.02
GARNL3-205ENST00000435213 SLC12A5Q9H2X9 1139 aa8.69□□□□□ -1.02
GARNL3-205ENST00000435213 RPS6KL1Q9Y6S9 549 aa8.69□□□□□ -1.02
GARNL3-205ENST00000435213 PIK3R4Q99570 1358 aa8.69□□□□□ -1.02
GARNL3-205ENST00000435213 PPIP5K1Q6PFW1 1433 aa8.69□□□□□ -1.02
GARNL3-205ENST00000435213 ERCC3P19447 782 aa8.68□□□□□ -1.02
GARNL3-205ENST00000435213 NUCB2P80303 420 aa8.68□□□□□ -1.02
GARNL3-205ENST00000435213 YEATS2Q9ULM3 1422 aa8.68□□□□□ -1.02
GARNL3-205ENST00000435213 KIF20BQ96Q89 1820 aa8.68□□□□□ -1.02
GARNL3-205ENST00000435213 TRIM66O15016 1216 aa8.68□□□□□ -1.02
GARNL3-205ENST00000435213 SETSIPP0DME0 302 aa8.68□□□□□ -1.02
GARNL3-205ENST00000435213 MAGEA9P43362 315 aa8.68□□□□□ -1.02
GARNL3-205ENST00000435213 NCBP1Q09161 790 aaKnown RBP8.68□□□□□ -1.02
GARNL3-205ENST00000435213 ZNF397Q8NF99 534 aaPredicted RBP8.68□□□□□ -1.02
GARNL3-205ENST00000435213 GAS2L2Q8NHY3 880 aa8.68□□□□□ -1.02
GARNL3-205ENST00000435213 TRIM35Q9UPQ4 493 aa8.68□□□□□ -1.02
GARNL3-205ENST00000435213 PTCH1Q13635 1447 aa8.68□□□□□ -1.02
GARNL3-205ENST00000435213 ZBTB7CA1YPR0 619 aa8.68□□□□□ -1.02
GARNL3-205ENST00000435213 CCP110O43303 1012 aa8.68□□□□□ -1.02
GARNL3-205ENST00000435213 CD2BP2O95400 341 aaKnown RBP8.68□□□□□ -1.02
GARNL3-205ENST00000435213 CCDC191Q8NCU4 936 aa8.68□□□□□ -1.02
GARNL3-205ENST00000435213 RBSNQ9H1K0 784 aa8.68□□□□□ -1.02
GARNL3-205ENST00000435213 MLH3Q9UHC1 1453 aa8.68□□□□□ -1.02
GARNL3-205ENST00000435213 ANKRD33BA6NCL7 494 aa8.67□□□□□ -1.02
GARNL3-205ENST00000435213 TPM1P09493 284 aa8.67□□□□□ -1.02
GARNL3-205ENST00000435213 PAX7P23759 505 aa8.67□□□□□ -1.02
GARNL3-205ENST00000435213 E2F4Q16254 413 aa8.67□□□□□ -1.02
GARNL3-205ENST00000435213 TBC1D9Q6ZT07 1266 aa8.67□□□□□ -1.02
GARNL3-205ENST00000435213 MSL3Q8N5Y2 521 aaKnown RBP8.67□□□□□ -1.02
GARNL3-205ENST00000435213 CLTCQ00610 1675 aaKnown RBP8.67□□□□□ -1.02
GARNL3-205ENST00000435213 CDC45O75419 566 aa8.67□□□□□ -1.02
GARNL3-205ENST00000435213 AP1ARQ63HQ0 302 aa8.67□□□□□ -1.02
GARNL3-205ENST00000435213 KRBA2Q6ZNG9 492 aa8.67□□□□□ -1.02
GARNL3-205ENST00000435213 EXOC8Q8IYI6 725 aa8.67□□□□□ -1.02
GARNL3-205ENST00000435213 GGT6Q6P531 493 aa8.67□□□□□ -1.02
GARNL3-205ENST00000435213 SRLQ86TD4 932 aa8.67□□□□□ -1.02
GARNL3-205ENST00000435213 PPM1EQ8WY54 764 aa8.67□□□□□ -1.02
GARNL3-205ENST00000435213 IRAK4Q9NWZ3 460 aa8.67□□□□□ -1.02
GARNL3-205ENST00000435213 CYP2E1P05181 493 aaPredicted RBP8.66□□□□□ -1.02
GARNL3-205ENST00000435213 MMS22LQ6ZRQ5 1243 aa8.66□□□□□ -1.02
GARNL3-205ENST00000435213 KLHL23Q8NBE8 558 aa8.66□□□□□ -1.02
GARNL3-205ENST00000435213 TEX13AQ9BXU3 409 aaPredicted RBP8.66□□□□□ -1.02
GARNL3-205ENST00000435213 C14orf93Q9H972 538 aaKnown RBP8.66□□□□□ -1.02
GARNL3-205ENST00000435213 SIGLEC1Q9BZZ2 1709 aa8.66□□□□□ -1.02
GARNL3-205ENST00000435213 DIP2CQ9Y2E4 1556 aa8.66□□□□□ -1.02
GARNL3-205ENST00000435213 EIF3JO75822 258 aaKnown RBP8.66□□□□□ -1.02
GARNL3-205ENST00000435213 TPM4P67936 248 aa8.66□□□□□ -1.02
GARNL3-205ENST00000435213 CCT2P78371 535 aaKnown RBP8.66□□□□□ -1.02
GARNL3-205ENST00000435213 ZSCAN23Q3MJ62 389 aa8.66□□□□□ -1.02
GARNL3-205ENST00000435213 C1QTNF12Q5T7M4 302 aa8.66□□□□□ -1.02
GARNL3-205ENST00000435213 FMNL3Q8IVF7 1028 aa8.66□□□□□ -1.02
GARNL3-205ENST00000435213 ZNF446Q9NWS9 450 aa8.66□□□□□ -1.02
GARNL3-205ENST00000435213 SMC3Q9UQE7 1217 aa8.66□□□□□ -1.02
GARNL3-205ENST00000435213 RRP15Q9Y3B9 282 aaKnown RBP8.66□□□□□ -1.02
GARNL3-205ENST00000435213 EVC2Q86UK5 1308 aa8.66□□□□□ -1.02
GARNL3-205ENST00000435213 PIK3C2BO00750 1634 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms