RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 ALDH1L1O75891 902 aa12.82□□□□□ -0.36
NOD1-206ENST00000434755 BRINP3Q76B58 766 aa12.82□□□□□ -0.36
NOD1-206ENST00000434755 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.82□□□□□ -0.36
NOD1-206ENST00000434755 CARD10Q9BWT7 1032 aa12.82□□□□□ -0.36
NOD1-206ENST00000434755 TNS3Q68CZ2 1445 aa12.82□□□□□ -0.36
NOD1-206ENST00000434755 FOSBP53539 338 aa12.82□□□□□ -0.36
NOD1-206ENST00000434755 FSD1Q9BTV5 496 aa12.82□□□□□ -0.36
NOD1-206ENST00000434755 MTMR7Q9Y216 660 aa12.82□□□□□ -0.36
NOD1-206ENST00000434755 ERVV-2B6SEH9 535 aa12.81□□□□□ -0.36
NOD1-206ENST00000434755 SRGAP3O43295 1099 aa12.81□□□□□ -0.36
NOD1-206ENST00000434755 PHF14O94880 888 aa12.81□□□□□ -0.36
NOD1-206ENST00000434755 BRPF1P55201 1214 aaPredicted RBP12.81□□□□□ -0.36
NOD1-206ENST00000434755 VPS53Q5VIR6 699 aa12.81□□□□□ -0.36
NOD1-206ENST00000434755 C1orf167Q5SNV9 1468 aa12.81□□□□□ -0.36
NOD1-206ENST00000434755 CPS1P31327 1500 aa12.81□□□□□ -0.36
NOD1-206ENST00000434755 CCDC57Q2TAC2 916 aa12.81□□□□□ -0.36
NOD1-206ENST00000434755 PDIA4P13667 645 aaKnown RBP12.81□□□□□ -0.36
NOD1-206ENST00000434755 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
NOD1-206ENST00000434755 ZPR1O75312 459 aa12.81□□□□□ -0.36
NOD1-206ENST00000434755 MAP4K4O95819 1239 aaPredicted RBP12.81□□□□□ -0.36
NOD1-206ENST00000434755 AMOTL1Q8IY63 956 aa12.81□□□□□ -0.36
NOD1-206ENST00000434755 TRDNQ13061 729 aa12.8□□□□□ -0.36
NOD1-206ENST00000434755 PHACTR3Q96KR7 559 aa12.8□□□□□ -0.36
NOD1-206ENST00000434755 GNL3LQ9NVN8 582 aaKnown RBP12.8□□□□□ -0.36
NOD1-206ENST00000434755 EXOC6BQ9Y2D4 811 aa12.8□□□□□ -0.36
NOD1-206ENST00000434755 CHL1O00533 1208 aa12.8□□□□□ -0.36
NOD1-206ENST00000434755 ANXA1P04083 346 aa12.8□□□□□ -0.36
NOD1-206ENST00000434755 CNNM1Q9NRU3 951 aa12.8□□□□□ -0.36
NOD1-206ENST00000434755 GOLGA6L3A6NEY3 463 aa12.8□□□□□ -0.36
NOD1-206ENST00000434755 CPLX1O14810 134 aa12.8□□□□□ -0.36
NOD1-206ENST00000434755 MARCH6O60337 910 aa12.8□□□□□ -0.36
NOD1-206ENST00000434755 KDM4AO75164 1064 aa12.8□□□□□ -0.36
NOD1-206ENST00000434755 CWC22Q9HCG8 908 aaKnown RBP12.8□□□□□ -0.36
NOD1-206ENST00000434755 DDX49Q9Y6V7 483 aaKnown RBP12.8□□□□□ -0.36
NOD1-206ENST00000434755 KDM2BQ8NHM5 1336 aa12.8□□□□□ -0.36
NOD1-206ENST00000434755 DHX16O60231 1041 aaKnown RBP12.79□□□□□ -0.36
NOD1-206ENST00000434755 AKAP17AQ02040 695 aaKnown RBP12.79□□□□□ -0.36
NOD1-206ENST00000434755 NUCB1Q02818 461 aa12.79□□□□□ -0.36
NOD1-206ENST00000434755 GSE1Q14687 1217 aa12.79□□□□□ -0.36
NOD1-206ENST00000434755 SYNE3Q6ZMZ3 975 aa12.79□□□□□ -0.36
NOD1-206ENST00000434755 NRDCO43847 1150 aa12.79□□□□□ -0.36
NOD1-206ENST00000434755 SMC5Q8IY18 1101 aa12.79□□□□□ -0.36
NOD1-206ENST00000434755 NAP1L5Q96NT1 182 aaPredicted RBP12.79□□□□□ -0.36
NOD1-206ENST00000434755 WDR17Q8IZU2 1322 aa12.79□□□□□ -0.36
NOD1-206ENST00000434755 NBPF6Q5VWK0 638 aa12.79□□□□□ -0.36
NOD1-206ENST00000434755 NBPF4Q96M43 638 aa12.79□□□□□ -0.36
NOD1-206ENST00000434755 PLEKHF1Q96S99 279 aa12.79□□□□□ -0.36
NOD1-206ENST00000434755 PTPRUQ92729 1446 aa12.78□□□□□ -0.36
NOD1-206ENST00000434755 KIF1BPQ96EK5 621 aa12.78□□□□□ -0.36
NOD1-206ENST00000434755 THRAP3Q9Y2W1 955 aaKnown RBP12.78□□□□□ -0.36
NOD1-206ENST00000434755 VPS37CA5D8V6 355 aaPredicted RBP12.78□□□□□ -0.36
NOD1-206ENST00000434755 ZBTB40Q9NUA8 1239 aa12.78□□□□□ -0.36
NOD1-206ENST00000434755 ERBB4Q15303 1308 aa12.78□□□□□ -0.36
NOD1-206ENST00000434755 CPLX2Q6PUV4 134 aaKnown RBP12.78□□□□□ -0.36
NOD1-206ENST00000434755 IGHDP01880 384 aa12.77□□□□□ -0.36
NOD1-206ENST00000434755 PSMA5P28066 241 aa12.77□□□□□ -0.36
NOD1-206ENST00000434755 CCDC158Q5M9N0 1113 aa12.77□□□□□ -0.36
NOD1-206ENST00000434755 STK11IPQ8N1F8 1099 aa12.77□□□□□ -0.36
NOD1-206ENST00000434755 ANKRD44Q8N8A2 993 aa12.77□□□□□ -0.36
NOD1-206ENST00000434755 ANO8Q9HCE9 1232 aaPredicted RBP12.77□□□□□ -0.36
NOD1-206ENST00000434755 SPINK5Q9NQ38 1064 aaPredicted RBP12.77□□□□□ -0.36
NOD1-206ENST00000434755 CEP126Q9P2H0 1117 aa12.77□□□□□ -0.36
NOD1-206ENST00000434755 GOLGA6L6A8MZA4 724 aa12.77□□□□□ -0.37
NOD1-206ENST00000434755 TBC1D2BQ9UPU7 963 aa12.77□□□□□ -0.37
NOD1-206ENST00000434755 AKAP2Q9Y2D5 859 aa12.77□□□□□ -0.37
NOD1-206ENST00000434755 USP32Q8NFA0 1604 aa12.77□□□□□ -0.37
NOD1-206ENST00000434755 ANKRD13DQ6ZTN6 518 aa12.77□□□□□ -0.37
NOD1-206ENST00000434755 PPP1R42Q7Z4L9 355 aa12.77□□□□□ -0.37
NOD1-206ENST00000434755 MPHOSPH8Q99549 860 aa12.77□□□□□ -0.37
NOD1-206ENST00000434755 KSR2Q6VAB6 950 aa12.76□□□□□ -0.37
NOD1-206ENST00000434755 NFXL1Q6ZNB6 911 aa12.76□□□□□ -0.37
NOD1-206ENST00000434755 SLC52A2Q9HAB3 445 aa12.76□□□□□ -0.37
NOD1-206ENST00000434755 ERBB3P21860 1342 aa12.76□□□□□ -0.37
NOD1-206ENST00000434755 NCAPD2Q15021 1401 aa12.76□□□□□ -0.37
NOD1-206ENST00000434755 DDX21Q9NR30 783 aaKnown RBP eCLIP12.76□□□□□ -0.37
NOD1-206ENST00000434755 CWC25Q9NXE8 425 aaPredicted RBP12.76□□□□□ -0.37
NOD1-206ENST00000434755 PCDHB15Q9Y5E8 787 aa12.76□□□□□ -0.37
NOD1-206ENST00000434755 PNPLA6Q8IY17 1366 aa12.76□□□□□ -0.37
NOD1-206ENST00000434755 IGHMBP2P38935 993 aaKnown RBP12.76□□□□□ -0.37
NOD1-206ENST00000434755 NEK4P51957 841 aa12.76□□□□□ -0.37
NOD1-206ENST00000434755 AK7Q96M32 723 aa12.76□□□□□ -0.37
NOD1-206ENST00000434755 NFKBIBQ15653 356 aa12.75□□□□□ -0.37
NOD1-206ENST00000434755 RALYLQ86SE5 291 aaKnown RBP12.75□□□□□ -0.37
NOD1-206ENST00000434755 C3P01024 1663 aa12.75□□□□□ -0.37
NOD1-206ENST00000434755 ZSCAN25Q6NSZ9 544 aa12.75□□□□□ -0.37
NOD1-206ENST00000434755 ZNF790Q6PG37 636 aa12.75□□□□□ -0.37
NOD1-206ENST00000434755 MYD88Q99836 296 aa12.75□□□□□ -0.37
NOD1-206ENST00000434755 TRIM34Q9BYJ4 488 aa12.75□□□□□ -0.37
NOD1-206ENST00000434755 USP21Q9UK80 565 aa12.75□□□□□ -0.37
NOD1-206ENST00000434755 NFATC2IPQ8NCF5 419 aa12.74□□□□□ -0.37
NOD1-206ENST00000434755 LINS1Q8NG48 757 aa12.74□□□□□ -0.37
NOD1-206ENST00000434755 MSNP26038 577 aaKnown RBP12.74□□□□□ -0.37
NOD1-206ENST00000434755 FKBP4Q02790 459 aaKnown RBP eCLIP12.74□□□□□ -0.37
NOD1-206ENST00000434755 C8orf58Q8NAV2 365 aa12.74□□□□□ -0.37
NOD1-206ENST00000434755 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.74□□□□□ -0.37
NOD1-206ENST00000434755 TRPC5Q9UL62 973 aaPredicted RBP12.74□□□□□ -0.37
NOD1-206ENST00000434755 GLRX3O76003 335 aaKnown RBP12.73□□□□□ -0.37
NOD1-206ENST00000434755 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.73□□□□□ -0.37
NOD1-206ENST00000434755 UBR1Q8IWV7 1749 aa12.73□□□□□ -0.37
NOD1-206ENST00000434755 K7ELQ4 463 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms