RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 GDF9O60383 454 aa7.25□□□□□ -1.25
HMGB3P10-201ENST00000434734 LDHBP07195 334 aaKnown RBP7.25□□□□□ -1.25
HMGB3P10-201ENST00000434734 CENPBP07199 599 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P10-201ENST00000434734 JUNDP17535 347 aa7.25□□□□□ -1.25
HMGB3P10-201ENST00000434734 ARID5AQ03989 594 aa7.25□□□□□ -1.25
HMGB3P10-201ENST00000434734 PDE3BQ13370 1112 aa7.25□□□□□ -1.25
HMGB3P10-201ENST00000434734 GNL2Q13823 731 aaKnown RBP7.25□□□□□ -1.25
HMGB3P10-201ENST00000434734 HSP90AB4PQ58FF6 505 aa7.25□□□□□ -1.25
HMGB3P10-201ENST00000434734 RNF187Q5TA31 235 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P10-201ENST00000434734 TMC4Q7Z404 712 aa7.25□□□□□ -1.25
HMGB3P10-201ENST00000434734 MCF2L2Q86YR7 1114 aa7.25□□□□□ -1.25
HMGB3P10-201ENST00000434734 SMC5Q8IY18 1101 aa7.25□□□□□ -1.25
HMGB3P10-201ENST00000434734 ZCRB1Q8TBF4 217 aaKnown RBP7.25□□□□□ -1.25
HMGB3P10-201ENST00000434734 SETDB2Q96T68 719 aa7.25□□□□□ -1.25
HMGB3P10-201ENST00000434734 DNAAF2Q9NVR5 837 aaKnown RBP7.25□□□□□ -1.25
HMGB3P10-201ENST00000434734 TREHO43280 583 aa7.24□□□□□ -1.25
HMGB3P10-201ENST00000434734 PURBQ96QR8 312 aaKnown RBP7.24□□□□□ -1.25
HMGB3P10-201ENST00000434734 RBCK1Q9BYM8 510 aa7.24□□□□□ -1.25
HMGB3P10-201ENST00000434734 WWC3Q9ULE0 1092 aa7.24□□□□□ -1.25
HMGB3P10-201ENST00000434734 PRR12Q9ULL5 1215 aa7.24□□□□□ -1.25
HMGB3P10-201ENST00000434734 INPP5FQ9Y2H2 1132 aa7.24□□□□□ -1.25
HMGB3P10-201ENST00000434734 PCDHGB7Q9Y5F8 929 aa7.24□□□□□ -1.25
HMGB3P10-201ENST00000434734 SORBS3O60504 671 aa7.23□□□□□ -1.25
HMGB3P10-201ENST00000434734 PRPF40AO75400 957 aaKnown RBP7.23□□□□□ -1.25
HMGB3P10-201ENST00000434734 MAPK8P45983 427 aa7.23□□□□□ -1.25
HMGB3P10-201ENST00000434734 DAB2P98082 770 aa7.23□□□□□ -1.25
HMGB3P10-201ENST00000434734 SF3B2Q13435 895 aaKnown RBP7.23□□□□□ -1.25
HMGB3P10-201ENST00000434734 ZNF394Q53GI3 561 aa7.23□□□□□ -1.25
HMGB3P10-201ENST00000434734 SPTY2D1Q68D10 685 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P10-201ENST00000434734 TRAF7Q6Q0C0 670 aa7.23□□□□□ -1.25
HMGB3P10-201ENST00000434734 CCDC146Q8IYE0 955 aa7.23□□□□□ -1.25
HMGB3P10-201ENST00000434734 PHTF2Q8N3S3 785 aa7.23□□□□□ -1.25
HMGB3P10-201ENST00000434734 EMILIN1Q9Y6C2 1016 aa7.23□□□□□ -1.25
HMGB3P10-201ENST00000434734 ZBTB7BO15156 539 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P10-201ENST00000434734 PPFIA4O75335 1185 aa7.22□□□□□ -1.25
HMGB3P10-201ENST00000434734 DGAT1O75907 488 aa7.22□□□□□ -1.25
HMGB3P10-201ENST00000434734 STK10O94804 968 aaKnown RBP7.22□□□□□ -1.25
HMGB3P10-201ENST00000434734 RACK1P63244 317 aaKnown RBP7.22□□□□□ -1.25
HMGB3P10-201ENST00000434734 TSGA10IPQ3SY00 556 aa7.22□□□□□ -1.25
HMGB3P10-201ENST00000434734 DESI1Q6ICB0 168 aa7.22□□□□□ -1.25
HMGB3P10-201ENST00000434734 SGSM3Q96HU1 749 aa7.22□□□□□ -1.25
HMGB3P10-201ENST00000434734 DDX56Q9NY93 547 aaKnown RBP7.22□□□□□ -1.25
HMGB3P10-201ENST00000434734 PKD2L1Q9P0L9 805 aa7.22□□□□□ -1.25
HMGB3P10-201ENST00000434734 CEP126Q9P2H0 1117 aa7.22□□□□□ -1.25
HMGB3P10-201ENST00000434734 SFI1A8K8P3 1242 aa7.21□□□□□ -1.26
HMGB3P10-201ENST00000434734 CREB3O43889 395 aa7.21□□□□□ -1.26
HMGB3P10-201ENST00000434734 FGRP09769 529 aa7.21□□□□□ -1.26
HMGB3P10-201ENST00000434734 TRIM32Q13049 653 aa7.21□□□□□ -1.26
HMGB3P10-201ENST00000434734 PSMD2Q13200 908 aa7.21□□□□□ -1.26
HMGB3P10-201ENST00000434734 FAM50AQ14320 339 aaKnown RBP7.21□□□□□ -1.26
HMGB3P10-201ENST00000434734 DSC3Q14574 896 aa7.21□□□□□ -1.26
HMGB3P10-201ENST00000434734 RALBP1Q15311 655 aa7.21□□□□□ -1.26
HMGB3P10-201ENST00000434734 EML3Q32P44 896 aa7.21□□□□□ -1.26
HMGB3P10-201ENST00000434734 FOXD4L6Q3SYB3 417 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P10-201ENST00000434734 SOGA3Q5TF21 947 aa7.21□□□□□ -1.26
HMGB3P10-201ENST00000434734 FOXD4L3Q6VB84 417 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P10-201ENST00000434734 SIX5Q8N196 739 aa7.21□□□□□ -1.26
HMGB3P10-201ENST00000434734 GAS2L2Q8NHY3 880 aa7.21□□□□□ -1.26
HMGB3P10-201ENST00000434734 SPOCK3Q9BQ16 436 aa7.21□□□□□ -1.26
HMGB3P10-201ENST00000434734 S100BP04271 92 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P10-201ENST00000434734 NEFLP07196 543 aa7.2□□□□□ -1.26
HMGB3P10-201ENST00000434734 XRCC5P13010 732 aaKnown RBP7.2□□□□□ -1.26
HMGB3P10-201ENST00000434734 FKBP5Q13451 457 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P10-201ENST00000434734 PTPRNQ16849 979 aa7.2□□□□□ -1.26
HMGB3P10-201ENST00000434734 WNT7AO00755 349 aa7.19□□□□□ -1.26
HMGB3P10-201ENST00000434734 ENPP3O14638 875 aa7.19□□□□□ -1.26
HMGB3P10-201ENST00000434734 SEC13P55735 322 aa7.19□□□□□ -1.26
HMGB3P10-201ENST00000434734 WNT7BP56706 349 aa7.19□□□□□ -1.26
HMGB3P10-201ENST00000434734 PKDCCQ504Y2 493 aa7.19□□□□□ -1.26
HMGB3P10-201ENST00000434734 FMNL3Q8IVF7 1028 aa7.19□□□□□ -1.26
HMGB3P10-201ENST00000434734 MRFAP1L1Q96HT8 127 aa7.19□□□□□ -1.26
HMGB3P10-201ENST00000434734 NUDT12Q9BQG2 462 aa7.19□□□□□ -1.26
HMGB3P10-201ENST00000434734 DDX41Q9UJV9 622 aaKnown RBP7.19□□□□□ -1.26
HMGB3P10-201ENST00000434734 CHIC2Q9UKJ5 165 aa7.19□□□□□ -1.26
HMGB3P10-201ENST00000434734 K7ELQ4 463 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P10-201ENST00000434734 TNFRSF10AO00220 468 aa7.18□□□□□ -1.26
HMGB3P10-201ENST00000434734 LCE2BO14633 110 aa7.18□□□□□ -1.26
HMGB3P10-201ENST00000434734 DNAJC6O75061 913 aa7.18□□□□□ -1.26
HMGB3P10-201ENST00000434734 CCNYL3P0C7X3 344 aa7.18□□□□□ -1.26
HMGB3P10-201ENST00000434734 ATP1A2P50993 1020 aa7.18□□□□□ -1.26
HMGB3P10-201ENST00000434734 TBX4P57082 545 aa7.18□□□□□ -1.26
HMGB3P10-201ENST00000434734 EHHADHQ08426 723 aa7.18□□□□□ -1.26
HMGB3P10-201ENST00000434734 FOXC1Q12948 553 aa7.18□□□□□ -1.26
HMGB3P10-201ENST00000434734 NAA30Q147X3 362 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P10-201ENST00000434734 TRIM50Q86XT4 487 aa7.18□□□□□ -1.26
HMGB3P10-201ENST00000434734 CCDC24Q8N4L8 307 aa7.18□□□□□ -1.26
HMGB3P10-201ENST00000434734 TPCN2Q8NHX9 752 aa7.18□□□□□ -1.26
HMGB3P10-201ENST00000434734 PRDM10Q9NQV6 1147 aa7.18□□□□□ -1.26
HMGB3P10-201ENST00000434734 TERF2IPQ9NYB0 399 aa7.18□□□□□ -1.26
HMGB3P10-201ENST00000434734 FKBPLQ9UIM3 349 aa7.18□□□□□ -1.26
HMGB3P10-201ENST00000434734 MAFGO15525 162 aa7.17□□□□□ -1.26
HMGB3P10-201ENST00000434734 EIF3JO75822 258 aaKnown RBP7.17□□□□□ -1.26
HMGB3P10-201ENST00000434734 IGHA2P01877 340 aa7.17□□□□□ -1.26
HMGB3P10-201ENST00000434734 MPSTP25325 297 aa7.17□□□□□ -1.26
HMGB3P10-201ENST00000434734 RHBDL3P58872 404 aa7.17□□□□□ -1.26
HMGB3P10-201ENST00000434734 AMPD3Q01432 767 aa7.17□□□□□ -1.26
HMGB3P10-201ENST00000434734 CBLBQ13191 982 aa7.17□□□□□ -1.26
HMGB3P10-201ENST00000434734 SERINC3Q13530 473 aa7.17□□□□□ -1.26
HMGB3P10-201ENST00000434734 HELQQ8TDG4 1101 aa7.17□□□□□ -1.26
HMGB3P10-201ENST00000434734 RNPC3Q96LT9 517 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms