RNA–Protein interactions for RNA: ENST00000434411.5

SNHG20-202, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 2,143 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-202ENST00000434411 PRDM16Q9HAZ2 1276 aa15.23■□□□□ 0.03
SNHG20-202ENST00000434411 DOT1LQ8TEK3 1739 aa15.23■□□□□ 0.03
SNHG20-202ENST00000434411 PATL2C9JE40 543 aaKnown RBP15.23■□□□□ 0.03
SNHG20-202ENST00000434411 CLGNO14967 610 aa15.23■□□□□ 0.03
SNHG20-202ENST00000434411 KCNQ2O43526 872 aa15.23■□□□□ 0.03
SNHG20-202ENST00000434411 PSMD1Q99460 953 aa15.23■□□□□ 0.03
SNHG20-202ENST00000434411 BCAR3O75815 825 aa15.22■□□□□ 0.03
SNHG20-202ENST00000434411 VGLL3A8MV65 326 aa15.22■□□□□ 0.03
SNHG20-202ENST00000434411 LRP5O75197 1615 aa15.22■□□□□ 0.03
SNHG20-202ENST00000434411 PKD1L3Q7Z443 1732 aa15.21■□□□□ 0.02
SNHG20-202ENST00000434411 RARSP54136 660 aaKnown RBP15.2■□□□□ 0.02
SNHG20-202ENST00000434411 CERS3Q8IU89 383 aa15.2■□□□□ 0.02
SNHG20-202ENST00000434411 DDRGK1Q96HY6 314 aa15.2■□□□□ 0.02
SNHG20-202ENST00000434411 PCDH11XQ9BZA7 1347 aa15.2■□□□□ 0.02
SNHG20-202ENST00000434411 PCDH11YQ9BZA8 1340 aa15.2■□□□□ 0.02
SNHG20-202ENST00000434411 RIPK4P57078 832 aa15.19■□□□□ 0.02
SNHG20-202ENST00000434411 IRX3P78415 501 aaPredicted RBP15.19■□□□□ 0.02
SNHG20-202ENST00000434411 TXNRD1Q16881 649 aa15.19■□□□□ 0.02
SNHG20-202ENST00000434411 NCAPD2Q15021 1401 aa15.19■□□□□ 0.02
SNHG20-202ENST00000434411 SYTL4Q96C24 671 aaPredicted RBP15.19■□□□□ 0.02
SNHG20-202ENST00000434411 EYA1Q99502 592 aa15.19■□□□□ 0.02
SNHG20-202ENST00000434411 LAS1LQ9Y4W2 734 aaKnown RBP15.19■□□□□ 0.02
SNHG20-202ENST00000434411 LMOD3Q0VAK6 560 aa15.18■□□□□ 0.02
SNHG20-202ENST00000434411 PROM2Q8N271 834 aa15.18■□□□□ 0.02
SNHG20-202ENST00000434411 PDCL3Q9H2J4 239 aa15.18■□□□□ 0.02
SNHG20-202ENST00000434411 EIF4A2Q14240 407 aaKnown RBP15.17■□□□□ 0.02
SNHG20-202ENST00000434411 FRAT1Q92837 279 aaPredicted RBP15.17■□□□□ 0.02
SNHG20-202ENST00000434411 PRKAR2BP31323 418 aa15.17■□□□□ 0.02
SNHG20-202ENST00000434411 TRIM35Q9UPQ4 493 aa15.17■□□□□ 0.02
SNHG20-202ENST00000434411 SPG7Q9UQ90 795 aa15.17■□□□□ 0.02
SNHG20-202ENST00000434411 HDAC5Q9UQL6 1122 aa15.17■□□□□ 0.02
SNHG20-202ENST00000434411 PRIM1P49642 420 aaKnown RBP15.16■□□□□ 0.02
SNHG20-202ENST00000434411 FAM161AQ3B820 660 aa15.16■□□□□ 0.02
SNHG20-202ENST00000434411 ITGB4P16144 1822 aa15.16■□□□□ 0.02
SNHG20-202ENST00000434411 ZNF622Q969S3 477 aaKnown RBP eCLIP15.15■□□□□ 0.021e-16■□□□□ 8.7
SNHG20-202ENST00000434411 STK32BQ9NY57 414 aa15.15■□□□□ 0.02
SNHG20-202ENST00000434411 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.15■□□□□ 0.02
SNHG20-202ENST00000434411 LY75O60449 1722 aa15.15■□□□□ 0.02
SNHG20-202ENST00000434411 IL13P35225 146 aa15.14■□□□□ 0.01
SNHG20-202ENST00000434411 NFE2L2Q16236 605 aa15.14■□□□□ 0.01
SNHG20-202ENST00000434411 CLUAP1Q96AJ1 413 aa15.14■□□□□ 0.01
SNHG20-202ENST00000434411 ZNF428Q96B54 188 aa15.14■□□□□ 0.01
SNHG20-202ENST00000434411 PLEKHG2Q9H7P9 1386 aa15.14■□□□□ 0.01
SNHG20-202ENST00000434411 MYCNP04198 464 aaPredicted RBP15.14■□□□□ 0.01
SNHG20-202ENST00000434411 C8orf34Q49A92 452 aa15.14■□□□□ 0.01
SNHG20-202ENST00000434411 DLG5Q8TDM6 1919 aa15.14■□□□□ 0.01
SNHG20-202ENST00000434411 IGSF1Q8N6C5 1336 aa15.13■□□□□ 0.01
SNHG20-202ENST00000434411 PSEN1P49768 467 aa15.13■□□□□ 0.01
SNHG20-202ENST00000434411 ZKSCAN2Q63HK3 967 aa15.13■□□□□ 0.01
SNHG20-202ENST00000434411 KIF16BQ96L93 1317 aa15.13■□□□□ 0.01
SNHG20-202ENST00000434411 CYP27B1O15528 508 aa15.13■□□□□ 0.01
SNHG20-202ENST00000434411 SLC27A3Q5K4L6 730 aa15.13■□□□□ 0.01
SNHG20-202ENST00000434411 SLC15A2Q16348 729 aa15.12■□□□□ 0.01
SNHG20-202ENST00000434411 TSR2Q969E8 191 aaKnown RBP15.12■□□□□ 0.01
SNHG20-202ENST00000434411 SMC4Q9NTJ3 1288 aa15.12■□□□□ 0.01
SNHG20-202ENST00000434411 CASZ1Q86V15 1759 aa15.11■□□□□ 0.01
SNHG20-202ENST00000434411 HMOX1P09601 288 aa15.11■□□□□ 0.01
SNHG20-202ENST00000434411 COG6Q9Y2V7 657 aa15.11■□□□□ 0.01
SNHG20-202ENST00000434411 TOGARAM1Q9Y4F4 1720 aa15.11■□□□□ 0.01
SNHG20-202ENST00000434411 PTMSP20962 102 aa15.11■□□□□ 0.01
SNHG20-202ENST00000434411 EXOSC9Q06265 439 aaKnown RBP15.11■□□□□ 0.01
SNHG20-202ENST00000434411 IFNL2Q8IZJ0 200 aa15.11■□□□□ 0.01
SNHG20-202ENST00000434411 PANK1Q8TE04 598 aa15.11■□□□□ 0.01
SNHG20-202ENST00000434411 PAPPAQ13219 1627 aa15.11■□□□□ 0.01
SNHG20-202ENST00000434411 IPO8O15397 1037 aaKnown RBP15.1■□□□□ 0.01
SNHG20-202ENST00000434411 GNAI1P63096 354 aa15.1■□□□□ 0.01
SNHG20-202ENST00000434411 NKX1-1Q15270 411 aaPredicted RBP15.1■□□□□ 0.01
SNHG20-202ENST00000434411 PHF14O94880 888 aa15.1■□□□□ 0.01
SNHG20-202ENST00000434411 HMGB2P26583 209 aaKnown RBP15.1■□□□□ 0.01
SNHG20-202ENST00000434411 ALDH1L2Q3SY69 923 aa15.1■□□□□ 0.01
SNHG20-202ENST00000434411 SPON1Q9HCB6 807 aa15.1■□□□□ 0.01
SNHG20-202ENST00000434411 VIRMAQ69YN4 1812 aaKnown RBP15.09■□□□□ 0.01
SNHG20-202ENST00000434411 QSER1Q2KHR3 1735 aa15.09■□□□□ 0.01
SNHG20-202ENST00000434411 IGHDP01880 384 aa15.09■□□□□ 0.01
SNHG20-202ENST00000434411 PLEKHO1Q53GL0 409 aaPredicted RBP15.09■□□□□ 0.01
SNHG20-202ENST00000434411 MPRIPQ6WCQ1 1025 aa15.09■□□□□ 0.01
SNHG20-202ENST00000434411 BCL2L13Q9BXK5 485 aa15.09■□□□□ 0.01
SNHG20-202ENST00000434411 DZIP1LQ8IYY4 767 aaKnown RBP15.08■□□□□ 0.01
SNHG20-202ENST00000434411 LRRC4BQ9NT99 713 aa15.08■□□□□ 0.01
SNHG20-202ENST00000434411 IFT57Q9NWB7 429 aa15.08■□□□□ 0.01
SNHG20-202ENST00000434411 PHKG2P15735 406 aa15.08■□□□□ 0
SNHG20-202ENST00000434411 AMOTQ4VCS5 1084 aa15.08■□□□□ 0
SNHG20-202ENST00000434411 SMAP1Q8IYB5 467 aaPredicted RBP15.08■□□□□ 0
SNHG20-202ENST00000434411 NPM3O75607 178 aaKnown RBP15.07■□□□□ 0
SNHG20-202ENST00000434411 MVPQ14764 893 aaKnown RBP15.07■□□□□ 0
SNHG20-202ENST00000434411 TAF1LQ8IZX4 1826 aa15.07■□□□□ 0
SNHG20-202ENST00000434411 HSP90AB1P08238 724 aaKnown RBP15.07■□□□□ 0
SNHG20-202ENST00000434411 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
SNHG20-202ENST00000434411 SULT6B1Q6IMI4 303 aa15.07■□□□□ 0
SNHG20-202ENST00000434411 SMARCC1Q92922 1105 aaPredicted RBP15.07■□□□□ 0
SNHG20-202ENST00000434411 CWC22Q9HCG8 908 aaKnown RBP15.07■□□□□ 0
SNHG20-202ENST00000434411 CCNL1Q9UK58 526 aaPredicted RBP15.07■□□□□ 0
SNHG20-202ENST00000434411 C5P01031 1676 aa15.06■□□□□ 0
SNHG20-202ENST00000434411 SLC4A3P48751 1232 aa15.06■□□□□ 0
SNHG20-202ENST00000434411 OS9Q13438 667 aaPredicted RBP15.05■□□□□ 0
SNHG20-202ENST00000434411 ATF7IPQ6VMQ6 1270 aa15.05■□□□□ 0
SNHG20-202ENST00000434411 RRAGDQ9NQL2 400 aaPredicted RBP15.05■□□□□ 0
SNHG20-202ENST00000434411 DDX19BQ9UMR2 479 aa15.05■□□□□ 0
SNHG20-202ENST00000434411 KDRP35968 1356 aa15.05■□□□□ -0
SNHG20-202ENST00000434411 TUBGCP6Q96RT7 1819 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms