RNA–Protein interactions for RNA: ENST00000428683.5

ZNF3-208, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-208ENST00000428683 NARFQ9UHQ1 456 aa13.76□□□□□ -0.21
ZNF3-208ENST00000428683 GOLGB1Q14789 3259 aaKnown RBP13.75□□□□□ -0.21
ZNF3-208ENST00000428683 C10orf71Q711Q0 1435 aa13.75□□□□□ -0.21
ZNF3-208ENST00000428683 KCNQ3O43525 872 aa13.75□□□□□ -0.21
ZNF3-208ENST00000428683 STARD3NLO95772 234 aa13.75□□□□□ -0.21
ZNF3-208ENST00000428683 CHRNA5P30532 468 aa13.75□□□□□ -0.21
ZNF3-208ENST00000428683 BICDL1Q6ZP65 573 aa13.75□□□□□ -0.21
ZNF3-208ENST00000428683 PIM2Q9P1W9 311 aa13.75□□□□□ -0.21
ZNF3-208ENST00000428683 ZNF330Q9Y3S2 320 aaPredicted RBP13.75□□□□□ -0.21
ZNF3-208ENST00000428683 TJP1Q07157 1748 aa13.74□□□□□ -0.21
ZNF3-208ENST00000428683 BTBD11A6QL63 1104 aa13.74□□□□□ -0.21
ZNF3-208ENST00000428683 NFIXQ14938 502 aa13.74□□□□□ -0.21
ZNF3-208ENST00000428683 BCL2L12Q9HB09 334 aa13.74□□□□□ -0.21
ZNF3-208ENST00000428683 KCPQ6ZWJ8 1503 aa13.74□□□□□ -0.21
ZNF3-208ENST00000428683 MRC1P22897 1456 aa13.74□□□□□ -0.21
ZNF3-208ENST00000428683 COL15A1P39059 1388 aa13.73□□□□□ -0.21
ZNF3-208ENST00000428683 SERPINB2P05120 415 aa13.73□□□□□ -0.21
ZNF3-208ENST00000428683 DCTN1Q14203 1278 aa13.73□□□□□ -0.21
ZNF3-208ENST00000428683 MCM10Q7L590 875 aa13.73□□□□□ -0.21
ZNF3-208ENST00000428683 RTF1Q92541 710 aaKnown RBP13.73□□□□□ -0.21
ZNF3-208ENST00000428683 TEX13AQ9BXU3 409 aaPredicted RBP13.73□□□□□ -0.21
ZNF3-208ENST00000428683 TBC1D2BQ9UPU7 963 aa13.73□□□□□ -0.21
ZNF3-208ENST00000428683 HEG1Q9ULI3 1381 aa13.72□□□□□ -0.21
ZNF3-208ENST00000428683 A1BGP04217 495 aa13.72□□□□□ -0.21
ZNF3-208ENST00000428683 EIF5P55010 431 aaKnown RBP13.72□□□□□ -0.21
ZNF3-208ENST00000428683 DALRD3Q5D0E6 543 aaKnown RBP13.72□□□□□ -0.21
ZNF3-208ENST00000428683 FMNL2Q96PY5 1086 aa13.72□□□□□ -0.21
ZNF3-208ENST00000428683 C4AP0C0L4 1744 aa13.72□□□□□ -0.21
ZNF3-208ENST00000428683 ADCY9O60503 1353 aa13.71□□□□□ -0.21
ZNF3-208ENST00000428683 A0A087WZG4 1122 aa13.71□□□□□ -0.21
ZNF3-208ENST00000428683 N4BP2Q86UW6 1770 aaPredicted RBP13.71□□□□□ -0.22
ZNF3-208ENST00000428683 PRAMEF22A3QJZ6 481 aa13.7□□□□□ -0.22
ZNF3-208ENST00000428683 PIP4K2AP48426 406 aaPredicted RBP13.7□□□□□ -0.22
ZNF3-208ENST00000428683 NPM2Q86SE8 214 aaKnown RBP13.7□□□□□ -0.22
ZNF3-208ENST00000428683 USP16Q9Y5T5 823 aa13.7□□□□□ -0.22
ZNF3-208ENST00000428683 CEMIPQ8WUJ3 1361 aa13.7□□□□□ -0.22
ZNF3-208ENST00000428683 C9orf131Q5VYM1 1079 aa13.69□□□□□ -0.22
ZNF3-208ENST00000428683 TBC1D9BQ66K14 1250 aa13.69□□□□□ -0.22
ZNF3-208ENST00000428683 CCDC24Q8N4L8 307 aa13.69□□□□□ -0.22
ZNF3-208ENST00000428683 MIS18AQ9NYP9 233 aa13.69□□□□□ -0.22
ZNF3-208ENST00000428683 ADAMTS7Q9UKP4 1686 aa13.69□□□□□ -0.22
ZNF3-208ENST00000428683 IL6STP40189 918 aaPredicted RBP13.68□□□□□ -0.22
ZNF3-208ENST00000428683 KIF3CO14782 793 aa13.67□□□□□ -0.22
ZNF3-208ENST00000428683 NEFMP07197 916 aa13.67□□□□□ -0.22
ZNF3-208ENST00000428683 C2CD5Q86YS7 1000 aa13.67□□□□□ -0.22
ZNF3-208ENST00000428683 KIAA1551Q9HCM1 1747 aa13.67□□□□□ -0.22
ZNF3-208ENST00000428683 KIF13BQ9NQT8 1826 aa13.67□□□□□ -0.22
ZNF3-208ENST00000428683 H0YIN7 160 aa13.66□□□□□ -0.22
ZNF3-208ENST00000428683 HTATSF1O43719 755 aaKnown RBP13.66□□□□□ -0.22
ZNF3-208ENST00000428683 SNRPA1P09661 255 aaKnown RBP13.66□□□□□ -0.22
ZNF3-208ENST00000428683 TAF7Q15545 349 aaPredicted RBP13.66□□□□□ -0.22
ZNF3-208ENST00000428683 DZIP3Q86Y13 1208 aaKnown RBP13.66□□□□□ -0.22
ZNF3-208ENST00000428683 ZNF622Q969S3 477 aaKnown RBP eCLIP13.65□□□□□ -0.229e-6■■□□□ 12.8
ZNF3-208ENST00000428683 RNF181Q9P0P0 153 aa13.65□□□□□ -0.22
ZNF3-208ENST00000428683 VIRMAQ69YN4 1812 aaKnown RBP13.64□□□□□ -0.23
ZNF3-208ENST00000428683 CARMIL3Q8ND23 1372 aa13.64□□□□□ -0.23
ZNF3-208ENST00000428683 NPHP1O15259 732 aa13.64□□□□□ -0.23
ZNF3-208ENST00000428683 CAMTA2O94983 1202 aa13.64□□□□□ -0.23
ZNF3-208ENST00000428683 RASSF7Q02833 373 aa13.64□□□□□ -0.23
ZNF3-208ENST00000428683 PRR5LQ6MZQ0 368 aa13.64□□□□□ -0.23
ZNF3-208ENST00000428683 TTLL6Q8N841 843 aa13.64□□□□□ -0.23
ZNF3-208ENST00000428683 SETDB2Q96T68 719 aa13.64□□□□□ -0.23
ZNF3-208ENST00000428683 NMRK2Q9NPI5 230 aa13.64□□□□□ -0.23
ZNF3-208ENST00000428683 ZNF219Q9P2Y4 722 aaPredicted RBP13.64□□□□□ -0.23
ZNF3-208ENST00000428683 DDX10Q13206 875 aaKnown RBP13.63□□□□□ -0.23
ZNF3-208ENST00000428683 PLEKHF1Q96S99 279 aa13.63□□□□□ -0.23
ZNF3-208ENST00000428683 THUMPD2Q9BTF0 503 aaKnown RBP13.63□□□□□ -0.23
ZNF3-208ENST00000428683 UBR2Q8IWV8 1755 aa13.63□□□□□ -0.23
ZNF3-208ENST00000428683 NBPF26B4DH59 902 aa13.62□□□□□ -0.23
ZNF3-208ENST00000428683 HSPA6P17066 643 aa13.62□□□□□ -0.23
ZNF3-208ENST00000428683 PDE6BP35913 854 aa13.62□□□□□ -0.23
ZNF3-208ENST00000428683 NBPF10Q6P3W6 841 aaKnown RBP13.62□□□□□ -0.23
ZNF3-208ENST00000428683 NGEFQ8N5V2 710 aa13.62□□□□□ -0.23
ZNF3-208ENST00000428683 NBPF15Q8N660 670 aa13.62□□□□□ -0.23
ZNF3-208ENST00000428683 BRIP1Q9BX63 1249 aa13.62□□□□□ -0.23
ZNF3-208ENST00000428683 NFE2L2Q16236 605 aa13.61□□□□□ -0.23
ZNF3-208ENST00000428683 RRAGCQ9HB90 399 aa13.61□□□□□ -0.23
ZNF3-208ENST00000428683 FAM177BA6PVY3 158 aa13.6□□□□□ -0.23
ZNF3-208ENST00000428683 TOMM70O94826 608 aa13.6□□□□□ -0.23
ZNF3-208ENST00000428683 CNBD1Q8NA66 436 aa13.6□□□□□ -0.23
ZNF3-208ENST00000428683 PNNQ9H307 717 aaKnown RBP13.6□□□□□ -0.23
ZNF3-208ENST00000428683 MAPK8IP3Q9UPT6 1336 aa13.6□□□□□ -0.23
ZNF3-208ENST00000428683 SIPA1L3O60292 1781 aaPredicted RBP13.59□□□□□ -0.23
ZNF3-208ENST00000428683 C21orf2O43822 256 aa13.59□□□□□ -0.23
ZNF3-208ENST00000428683 PRELPP51888 382 aa13.59□□□□□ -0.23
ZNF3-208ENST00000428683 ST5P78524 1137 aa13.59□□□□□ -0.23
ZNF3-208ENST00000428683 NBPF5PQ86XG9 351 aaPredicted RBP13.59□□□□□ -0.23
ZNF3-208ENST00000428683 C16orf71Q8IYS4 520 aaPredicted RBP13.59□□□□□ -0.23
ZNF3-208ENST00000428683 PNISRQ8TF01 805 aaKnown RBP13.59□□□□□ -0.23
ZNF3-208ENST00000428683 RRP7AQ9Y3A4 280 aaKnown RBP13.59□□□□□ -0.23
ZNF3-208ENST00000428683 AFDNP55196 1824 aaKnown RBP13.58□□□□□ -0.24
ZNF3-208ENST00000428683 LMNB1P20700 586 aa13.58□□□□□ -0.24
ZNF3-208ENST00000428683 RALBP1Q15311 655 aa13.58□□□□□ -0.24
ZNF3-208ENST00000428683 HLFQ16534 295 aa13.58□□□□□ -0.24
ZNF3-208ENST00000428683 CLEC4GQ6UXB4 293 aa13.58□□□□□ -0.24
ZNF3-208ENST00000428683 PDZRN3Q9UPQ7 1066 aa13.58□□□□□ -0.24
ZNF3-208ENST00000428683 NIP7Q9Y221 180 aaKnown RBP eCLIP13.58□□□□□ -0.24
ZNF3-208ENST00000428683 KDM2BQ8NHM5 1336 aa13.58□□□□□ -0.24
ZNF3-208ENST00000428683 BRCA1P38398 1863 aaKnown RBP13.57□□□□□ -0.24
ZNF3-208ENST00000428683 NFKBIEO00221 500 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms