RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 IL17RAQ96F46 866 aa24.62■■□□□ 1.53
PMPCB-202ENST00000428154 MTX1Q13505 466 aa24.61■■□□□ 1.53
PMPCB-202ENST00000428154 ESYT1Q9BSJ8 1104 aa24.61■■□□□ 1.53
PMPCB-202ENST00000428154 HYPKQ9NX55 129 aa24.61■■□□□ 1.53
PMPCB-202ENST00000428154 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.61■■□□□ 1.534e-7■■□□□ 12.3
PMPCB-202ENST00000428154 PI4KAP2A4QPH2 592 aa24.61■■□□□ 1.53
PMPCB-202ENST00000428154 GOLGA6L22H0YM25 854 aa24.61■■□□□ 1.53
PMPCB-202ENST00000428154 GIGYF1O75420 1035 aaPredicted RBP24.61■■□□□ 1.53
PMPCB-202ENST00000428154 PPP1R42Q7Z4L9 355 aa24.61■■□□□ 1.53
PMPCB-202ENST00000428154 PI4KAP1Q8N8J0 262 aa24.61■■□□□ 1.53
PMPCB-202ENST00000428154 PXDNQ92626 1479 aa24.6■■□□□ 1.53
PMPCB-202ENST00000428154 ERBB3P21860 1342 aa24.6■■□□□ 1.53
PMPCB-202ENST00000428154 ADCY9O60503 1353 aa24.58■■□□□ 1.53
PMPCB-202ENST00000428154 ATF3P18847 181 aa24.58■■□□□ 1.53
PMPCB-202ENST00000428154 LMOD2Q6P5Q4 547 aa24.58■■□□□ 1.53
PMPCB-202ENST00000428154 KSR2Q6VAB6 950 aa24.58■■□□□ 1.53
PMPCB-202ENST00000428154 SURF6O75683 361 aaKnown RBP24.58■■□□□ 1.52
PMPCB-202ENST00000428154 DDX58O95786 925 aaKnown RBP24.58■■□□□ 1.52
PMPCB-202ENST00000428154 CHMLP26374 656 aa24.58■■□□□ 1.52
PMPCB-202ENST00000428154 RHPN1Q8TCX5 695 aa24.58■■□□□ 1.52
PMPCB-202ENST00000428154 FSD2A1L4K1 749 aa24.57■■□□□ 1.52
PMPCB-202ENST00000428154 GOLGA6L3A6NEY3 463 aa24.57■■□□□ 1.52
PMPCB-202ENST00000428154 SRGAP3O43295 1099 aa24.56■■□□□ 1.52
PMPCB-202ENST00000428154 KCNQ3O43525 872 aa24.56■■□□□ 1.52
PMPCB-202ENST00000428154 RAPGEF4Q8WZA2 1011 aa24.56■■□□□ 1.52
PMPCB-202ENST00000428154 USP42Q9H9J4 1324 aaKnown RBP24.56■■□□□ 1.52
PMPCB-202ENST00000428154 RGPD5Q99666 1765 aa24.56■■□□□ 1.52
PMPCB-202ENST00000428154 SCN11AQ9UI33 1791 aa24.56■■□□□ 1.52
PMPCB-202ENST00000428154 XPCQ01831 940 aaPredicted RBP24.55■■□□□ 1.52
PMPCB-202ENST00000428154 TRIM6-TRIM34B2RNG4 842 aa24.55■■□□□ 1.52
PMPCB-202ENST00000428154 ERC1Q8IUD2 1116 aa24.55■■□□□ 1.52
PMPCB-202ENST00000428154 SPG7Q9UQ90 795 aa24.55■■□□□ 1.52
PMPCB-202ENST00000428154 AXIN2Q9Y2T1 843 aa24.55■■□□□ 1.52
PMPCB-202ENST00000428154 DDX21Q9NR30 783 aaKnown RBP eCLIP24.54■■□□□ 1.52
PMPCB-202ENST00000428154 TTC41PQ6P2S7 1318 aa24.54■■□□□ 1.52
PMPCB-202ENST00000428154 NBPF7P0C2Y1 421 aaPredicted RBP24.53■■□□□ 1.52
PMPCB-202ENST00000428154 TATP17735 454 aaPredicted RBP24.53■■□□□ 1.52
PMPCB-202ENST00000428154 AK9Q5TCS8 1911 aa24.53■■□□□ 1.52
PMPCB-202ENST00000428154 RILPL2Q969X0 211 aa24.52■■□□□ 1.52
PMPCB-202ENST00000428154 NPHP3Q7Z494 1330 aa24.52■■□□□ 1.52
PMPCB-202ENST00000428154 COL18A1P39060 1754 aa24.52■■□□□ 1.52
PMPCB-202ENST00000428154 CADPS2Q86UW7 1296 aa24.52■■□□□ 1.52
PMPCB-202ENST00000428154 LINS1Q8NG48 757 aa24.52■■□□□ 1.52
PMPCB-202ENST00000428154 UTYO14607 1347 aa24.52■■□□□ 1.52
PMPCB-202ENST00000428154 CNTROBQ8N137 903 aa24.51■■□□□ 1.51
PMPCB-202ENST00000428154 C9orf78Q9NZ63 289 aaPredicted RBP24.51■■□□□ 1.51
PMPCB-202ENST00000428154 MAP3K2Q9Y2U5 619 aa24.51■■□□□ 1.51
PMPCB-202ENST00000428154 CRYBG1Q9Y4K1 1723 aa24.51■■□□□ 1.51
PMPCB-202ENST00000428154 CYP2E1P05181 493 aaPredicted RBP24.5■■□□□ 1.51
PMPCB-202ENST00000428154 BRPF3Q9ULD4 1205 aa24.5■■□□□ 1.51
PMPCB-202ENST00000428154 TMEM94Q12767 1356 aa24.5■■□□□ 1.51
PMPCB-202ENST00000428154 MRE11P49959 708 aa24.49■■□□□ 1.51
PMPCB-202ENST00000428154 PI4K2BQ8TCG2 481 aa24.49■■□□□ 1.51
PMPCB-202ENST00000428154 SLC52A2Q9HAB3 445 aa24.49■■□□□ 1.51
PMPCB-202ENST00000428154 TNS3Q68CZ2 1445 aa24.48■■□□□ 1.51
PMPCB-202ENST00000428154 GLRX3O76003 335 aaKnown RBP24.48■■□□□ 1.51
PMPCB-202ENST00000428154 IFNL2Q8IZJ0 200 aa24.48■■□□□ 1.51
PMPCB-202ENST00000428154 GPATCH3Q96I76 525 aa24.48■■□□□ 1.51
PMPCB-202ENST00000428154 IL1RAPL2Q9NP60 686 aa24.48■■□□□ 1.51
PMPCB-202ENST00000428154 MRC1P22897 1456 aa24.48■■□□□ 1.51
PMPCB-202ENST00000428154 ZNF790Q6PG37 636 aa24.47■■□□□ 1.51
PMPCB-202ENST00000428154 CLASRPQ8N2M8 674 aaKnown RBP24.47■■□□□ 1.51
PMPCB-202ENST00000428154 ANO2Q9NQ90 1003 aa24.47■■□□□ 1.51
PMPCB-202ENST00000428154 FOXD4L1Q9NU39 408 aa24.47■■□□□ 1.51
PMPCB-202ENST00000428154 BAG4O95429 457 aaKnown RBP24.47■■□□□ 1.51
PMPCB-202ENST00000428154 SSFA2P28290 1259 aa24.47■■□□□ 1.51
PMPCB-202ENST00000428154 INTS4Q96HW7 963 aaKnown RBP24.47■■□□□ 1.51
PMPCB-202ENST00000428154 CPDO75976 1380 aa24.46■■□□□ 1.51
PMPCB-202ENST00000428154 PHKG2P15735 406 aa24.46■■□□□ 1.51
PMPCB-202ENST00000428154 ZC3H6P61129 1189 aaKnown RBP24.46■■□□□ 1.51
PMPCB-202ENST00000428154 TSHZ3Q63HK5 1081 aa24.46■■□□□ 1.51
PMPCB-202ENST00000428154 LARP1Q6PKG0 1096 aaKnown RBP24.46■■□□□ 1.51
PMPCB-202ENST00000428154 NEK4P51957 841 aa24.45■■□□□ 1.5
PMPCB-202ENST00000428154 NLRP2Q9NX02 1062 aa24.45■■□□□ 1.5
PMPCB-202ENST00000428154 PKD1L3Q7Z443 1732 aa24.45■■□□□ 1.5
PMPCB-202ENST00000428154 GRM8O00222 908 aa24.44■■□□□ 1.5
PMPCB-202ENST00000428154 OS9Q13438 667 aaPredicted RBP24.44■■□□□ 1.5
PMPCB-202ENST00000428154 CUL4AQ13619 759 aa24.44■■□□□ 1.5
PMPCB-202ENST00000428154 NUTM1Q86Y26 1132 aa24.44■■□□□ 1.5
PMPCB-202ENST00000428154 KDM6AO15550 1401 aaPredicted RBP24.44■■□□□ 1.5
PMPCB-202ENST00000428154 RUFY2Q8WXA3 655 aa24.44■■□□□ 1.5
PMPCB-202ENST00000428154 DCAF5Q96JK2 942 aa24.44■■□□□ 1.5
PMPCB-202ENST00000428154 ANXA1P04083 346 aa24.43■■□□□ 1.5
PMPCB-202ENST00000428154 HSPA4P34932 840 aa24.43■■□□□ 1.5
PMPCB-202ENST00000428154 NEXNQ0ZGT2 675 aa24.43■■□□□ 1.5
PMPCB-202ENST00000428154 KLHL40Q2TBA0 621 aa24.43■■□□□ 1.5
PMPCB-202ENST00000428154 SGSM2O43147 1006 aa24.42■■□□□ 1.5
PMPCB-202ENST00000428154 GZF1Q9H116 711 aaPredicted RBP24.42■■□□□ 1.5
PMPCB-202ENST00000428154 STRCP1A6NGW2 1772 aa24.42■■□□□ 1.5
PMPCB-202ENST00000428154 PDIA6Q15084 440 aa24.41■■□□□ 1.5
PMPCB-202ENST00000428154 PROSER3Q2NL68 480 aa24.41■■□□□ 1.5
PMPCB-202ENST00000428154 UNC5CLQ8IV45 518 aa24.41■■□□□ 1.5
PMPCB-202ENST00000428154 TMX3Q96JJ7 454 aa24.41■■□□□ 1.5
PMPCB-202ENST00000428154 PARP4Q9UKK3 1724 aaKnown RBP24.4■■□□□ 1.5
PMPCB-202ENST00000428154 SPATA31A3Q5VYP0 1347 aa24.4■■□□□ 1.5
PMPCB-202ENST00000428154 RAD50Q92878 1312 aa24.4■■□□□ 1.5
PMPCB-202ENST00000428154 XRCC6P12956 609 aaKnown RBP eCLIP24.4■■□□□ 1.5
PMPCB-202ENST00000428154 ECHDC1Q9NTX5 307 aa24.4■■□□□ 1.5
PMPCB-202ENST00000428154 KIAA1211Q6ZU35 1233 aa24.39■■□□□ 1.5
PMPCB-202ENST00000428154 FAM43AQ8N2R8 423 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms