RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 FOXD4L5Q5VV16 416 aaPredicted RBP20.88■□□□□ 0.93
RARA-206ENST00000425707 FOXD4L4Q8WXT5 416 aaPredicted RBP20.88■□□□□ 0.93
RARA-206ENST00000425707 ATP6V1DQ9Y5K8 247 aa20.88■□□□□ 0.93
RARA-206ENST00000425707 UBR1Q8IWV7 1749 aa20.88■□□□□ 0.93
RARA-206ENST00000425707 HMGN5P82970 282 aaKnown RBP20.88■□□□□ 0.93
RARA-206ENST00000425707 FAM13BQ9NYF5 915 aa20.88■□□□□ 0.93
RARA-206ENST00000425707 UBE2HP62256 183 aa20.88■□□□□ 0.93
RARA-206ENST00000425707 MYRIPQ8NFW9 859 aa20.88■□□□□ 0.93
RARA-206ENST00000425707 TTC14Q96N46 770 aa20.88■□□□□ 0.93
RARA-206ENST00000425707 USP54Q70EL1 1684 aa20.87■□□□□ 0.93
RARA-206ENST00000425707 RBM10P98175 930 aaKnown RBP20.87■□□□□ 0.93
RARA-206ENST00000425707 GTF2F1P35269 517 aaKnown RBP eCLIP20.87■□□□□ 0.931e-7■■■■■ 30.9
RARA-206ENST00000425707 FKBP5Q13451 457 aaPredicted RBP20.87■□□□□ 0.93
RARA-206ENST00000425707 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.87■□□□□ 0.93
RARA-206ENST00000425707 ADAMTS13Q76LX8 1427 aa20.87■□□□□ 0.93
RARA-206ENST00000425707 GADD45BO75293 160 aaPredicted RBP20.86■□□□□ 0.93
RARA-206ENST00000425707 ZSCAN22P10073 491 aaPredicted RBP20.86■□□□□ 0.93
RARA-206ENST00000425707 TSHZ3Q63HK5 1081 aa20.86■□□□□ 0.93
RARA-206ENST00000425707 SGSM2O43147 1006 aa20.86■□□□□ 0.93
RARA-206ENST00000425707 POLA2Q14181 598 aa20.86■□□□□ 0.93
RARA-206ENST00000425707 MIS18AQ9NYP9 233 aa20.86■□□□□ 0.93
RARA-206ENST00000425707 CEP170BQ9Y4F5 1589 aaPredicted RBP20.86■□□□□ 0.93
RARA-206ENST00000425707 PDIA4P13667 645 aaKnown RBP20.85■□□□□ 0.93
RARA-206ENST00000425707 USP42Q9H9J4 1324 aaKnown RBP20.85■□□□□ 0.93
RARA-206ENST00000425707 TMEM2Q9UHN6 1383 aa20.85■□□□□ 0.93
RARA-206ENST00000425707 MAP3K5Q99683 1374 aa20.85■□□□□ 0.93
RARA-206ENST00000425707 UNC5CLQ8IV45 518 aa20.85■□□□□ 0.93
RARA-206ENST00000425707 USP44Q9H0E7 712 aa20.85■□□□□ 0.93
RARA-206ENST00000425707 SPTLC3Q9NUV7 552 aa20.85■□□□□ 0.93
RARA-206ENST00000425707 LRRFIP2Q9Y608 721 aaKnown RBP20.85■□□□□ 0.93
RARA-206ENST00000425707 FOXO3O43524 673 aa20.84■□□□□ 0.93
RARA-206ENST00000425707 UPF3BQ9BZI7 483 aaKnown RBP20.84■□□□□ 0.93
RARA-206ENST00000425707 LIMCH1Q9UPQ0 1083 aa20.84■□□□□ 0.93
RARA-206ENST00000425707 TPM3P06753 285 aa20.83■□□□□ 0.93
RARA-206ENST00000425707 UBTFL1P0CB47 393 aaPredicted RBP20.83■□□□□ 0.93
RARA-206ENST00000425707 PI4K2BQ8TCG2 481 aa20.83■□□□□ 0.93
RARA-206ENST00000425707 CHD2O14647 1828 aaKnown RBP20.83■□□□□ 0.93
RARA-206ENST00000425707 SNX14Q9Y5W7 946 aa20.83■□□□□ 0.93
RARA-206ENST00000425707 GNAT3A8MTJ3 354 aa20.82■□□□□ 0.92
RARA-206ENST00000425707 LSG1Q9H089 658 aaKnown RBP20.82■□□□□ 0.92
RARA-206ENST00000425707 STX6O43752 255 aa20.82■□□□□ 0.92
RARA-206ENST00000425707 SMAP1Q8IYB5 467 aaPredicted RBP20.82■□□□□ 0.92
RARA-206ENST00000425707 CHMP4AQ9BY43 222 aa20.82■□□□□ 0.92
RARA-206ENST00000425707 CNTROBQ8N137 903 aa20.81■□□□□ 0.92
RARA-206ENST00000425707 KIF1BPQ96EK5 621 aa20.81■□□□□ 0.92
RARA-206ENST00000425707 PLEKHG1Q9ULL1 1385 aa20.81■□□□□ 0.92
RARA-206ENST00000425707 NOLC1Q14978 699 aaKnown RBP eCLIP20.81■□□□□ 0.92
RARA-206ENST00000425707 EYA1Q99502 592 aa20.81■□□□□ 0.92
RARA-206ENST00000425707 FUCA2Q9BTY2 467 aa20.81■□□□□ 0.92
RARA-206ENST00000425707 DIP2AQ14689 1571 aa20.81■□□□□ 0.92
RARA-206ENST00000425707 F13A1P00488 732 aa20.8■□□□□ 0.92
RARA-206ENST00000425707 HSP90AB4PQ58FF6 505 aa20.8■□□□□ 0.92
RARA-206ENST00000425707 NWD1Q149M9 1564 aa20.8■□□□□ 0.92
RARA-206ENST00000425707 PIK3C2AO00443 1686 aa20.8■□□□□ 0.92
RARA-206ENST00000425707 KDM4AO75164 1064 aa20.8■□□□□ 0.92
RARA-206ENST00000425707 KCNB2Q92953 911 aa20.8■□□□□ 0.92
RARA-206ENST00000425707 ZSCAN31Q96LW9 406 aaPredicted RBP20.8■□□□□ 0.92
RARA-206ENST00000425707 TM6SF1Q9BZW5 370 aa20.8■□□□□ 0.92
RARA-206ENST00000425707 IL25Q9H293 177 aa20.8■□□□□ 0.92
RARA-206ENST00000425707 TTC41PQ6P2S7 1318 aa20.79■□□□□ 0.92
RARA-206ENST00000425707 ADCY5O95622 1261 aa20.79■□□□□ 0.92
RARA-206ENST00000425707 NOL8Q76FK4 1167 aaKnown RBP20.79■□□□□ 0.92
RARA-206ENST00000425707 RHPN1Q8TCX5 695 aa20.79■□□□□ 0.92
RARA-206ENST00000425707 TNRQ92752 1358 aa20.79■□□□□ 0.92
RARA-206ENST00000425707 SYT1P21579 422 aa20.79■□□□□ 0.92
RARA-206ENST00000425707 GDPD2Q9HCC8 539 aa20.79■□□□□ 0.92
RARA-206ENST00000425707 SH2B1Q9NRF2 756 aaPredicted RBP20.78■□□□□ 0.92
RARA-206ENST00000425707 CNPY2Q9Y2B0 182 aa20.78■□□□□ 0.92
RARA-206ENST00000425707 AK2P54819 239 aa20.78■□□□□ 0.92
RARA-206ENST00000425707 TAF7Q15545 349 aaPredicted RBP20.78■□□□□ 0.92
RARA-206ENST00000425707 USP25Q9UHP3 1055 aa20.78■□□□□ 0.92
RARA-206ENST00000425707 RUFY3Q7L099 469 aa20.78■□□□□ 0.92
RARA-206ENST00000425707 CCDC94Q9BW85 323 aaPredicted RBP20.78■□□□□ 0.92
RARA-206ENST00000425707 SMC3Q9UQE7 1217 aa20.78■□□□□ 0.92
RARA-206ENST00000425707 HOXB7P09629 217 aa20.77■□□□□ 0.92
RARA-206ENST00000425707 MED1Q15648 1581 aaPredicted RBP20.77■□□□□ 0.92
RARA-206ENST00000425707 VPS53Q5VIR6 699 aa20.77■□□□□ 0.91
RARA-206ENST00000425707 RUFY2Q8WXA3 655 aa20.76■□□□□ 0.91
RARA-206ENST00000425707 PPP1R42Q7Z4L9 355 aa20.76■□□□□ 0.91
RARA-206ENST00000425707 MARF1Q9Y4F3 1742 aaKnown RBP20.75■□□□□ 0.91
RARA-206ENST00000425707 SURF6O75683 361 aaKnown RBP20.75■□□□□ 0.91
RARA-206ENST00000425707 IL1RAPL2Q9NP60 686 aa20.75■□□□□ 0.91
RARA-206ENST00000425707 HYPKQ9NX55 129 aa20.75■□□□□ 0.91
RARA-206ENST00000425707 KDM3BQ7LBC6 1761 aa20.74■□□□□ 0.91
RARA-206ENST00000425707 GLRX3O76003 335 aaKnown RBP20.74■□□□□ 0.91
RARA-206ENST00000425707 HCLS1P14317 486 aaPredicted RBP20.74■□□□□ 0.91
RARA-206ENST00000425707 AMPHP49418 695 aa20.74■□□□□ 0.91
RARA-206ENST00000425707 NUTM1Q86Y26 1132 aa20.74■□□□□ 0.91
RARA-206ENST00000425707 ESF1Q9H501 851 aaKnown RBP20.74■□□□□ 0.91
RARA-206ENST00000425707 CCDC171Q6TFL3 1326 aa20.74■□□□□ 0.91
RARA-206ENST00000425707 DNTTIP2Q5QJE6 756 aaKnown RBP20.74■□□□□ 0.91
RARA-206ENST00000425707 RASEFQ8IZ41 740 aa20.73■□□□□ 0.91
RARA-206ENST00000425707 MTX1Q13505 466 aa20.73■□□□□ 0.91
RARA-206ENST00000425707 IL17REQ8NFR9 667 aa20.72■□□□□ 0.91
RARA-206ENST00000425707 ZSWIM6Q9HCJ5 1215 aa20.72■□□□□ 0.91
RARA-206ENST00000425707 PRDM4Q9UKN5 801 aa20.72■□□□□ 0.91
RARA-206ENST00000425707 MTMR6Q9Y217 621 aa20.72■□□□□ 0.91
RARA-206ENST00000425707 CEMIPQ8WUJ3 1361 aa20.71■□□□□ 0.91
RARA-206ENST00000425707 ELP1O95163 1332 aa20.71■□□□□ 0.91
RARA-206ENST00000425707 HDGFL1Q5TGJ6 251 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms