RNA–Protein interactions for RNA: ENST00000424248.2

DENND3-202, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene DENND3, Length 4,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-202ENST00000424248 MBIPQ9NS73 344 aa16.41■□□□□ 0.22
DENND3-202ENST00000424248 WDR7Q9Y4E6 1490 aa16.41■□□□□ 0.22
DENND3-202ENST00000424248 CBX1P83916 185 aa16.41■□□□□ 0.22
DENND3-202ENST00000424248 TMOD3Q9NYL9 352 aa16.41■□□□□ 0.22
DENND3-202ENST00000424248 LRRFIP2Q9Y608 721 aaKnown RBP16.41■□□□□ 0.22
DENND3-202ENST00000424248 F6X3S4 739 aa16.41■□□□□ 0.22
DENND3-202ENST00000424248 TDO2P48775 406 aa16.41■□□□□ 0.22
DENND3-202ENST00000424248 GSDMDP57764 484 aa16.41■□□□□ 0.22
DENND3-202ENST00000424248 TTC22Q5TAA0 569 aa16.41■□□□□ 0.22
DENND3-202ENST00000424248 MAGEC2Q9UBF1 373 aaPredicted RBP16.41■□□□□ 0.22
DENND3-202ENST00000424248 ABCC10Q5T3U5 1492 aa16.4■□□□□ 0.22
DENND3-202ENST00000424248 PIK3R4Q99570 1358 aa16.4■□□□□ 0.22
DENND3-202ENST00000424248 HMGB1P09429 215 aaKnown RBP16.4■□□□□ 0.22
DENND3-202ENST00000424248 RAB3GAP1Q15042 981 aa16.4■□□□□ 0.22
DENND3-202ENST00000424248 MTMR7Q9Y216 660 aa16.4■□□□□ 0.22
DENND3-202ENST00000424248 UHRF1BP1LA0JNW5 1464 aa16.4■□□□□ 0.22
DENND3-202ENST00000424248 TEX14Q8IWB6 1497 aa16.4■□□□□ 0.22
DENND3-202ENST00000424248 ADCY5O95622 1261 aa16.4■□□□□ 0.22
DENND3-202ENST00000424248 TNNT1P13805 278 aa16.4■□□□□ 0.22
DENND3-202ENST00000424248 AXDND1Q5T1B0 1012 aaPredicted RBP16.4■□□□□ 0.22
DENND3-202ENST00000424248 ZNF652Q9Y2D9 606 aa16.4■□□□□ 0.22
DENND3-202ENST00000424248 PAXBP1Q9Y5B6 917 aa16.4■□□□□ 0.22
DENND3-202ENST00000424248 SMARCA5O60264 1052 aaPredicted RBP16.4■□□□□ 0.22
DENND3-202ENST00000424248 PIK3C2GO75747 1445 aa16.4■□□□□ 0.22
DENND3-202ENST00000424248 TESK2Q96S53 571 aa16.4■□□□□ 0.22
DENND3-202ENST00000424248 PANK2Q9BZ23 570 aa16.4■□□□□ 0.22
DENND3-202ENST00000424248 ANAPC15P60006 121 aa16.39■□□□□ 0.21
DENND3-202ENST00000424248 METTL24Q5JXM2 366 aa16.39■□□□□ 0.21
DENND3-202ENST00000424248 IQCEQ6IPM2 695 aa16.39■□□□□ 0.21
DENND3-202ENST00000424248 CCDC83Q8IWF9 413 aa16.39■□□□□ 0.21
DENND3-202ENST00000424248 MYD88Q99836 296 aa16.39■□□□□ 0.21
DENND3-202ENST00000424248 STIM1Q13586 685 aa16.39■□□□□ 0.21
DENND3-202ENST00000424248 MPRIPQ6WCQ1 1025 aa16.39■□□□□ 0.21
DENND3-202ENST00000424248 AIDAQ96BJ3 306 aa16.39■□□□□ 0.21
DENND3-202ENST00000424248 LUC7LQ9NQ29 371 aaKnown RBP16.39■□□□□ 0.21
DENND3-202ENST00000424248 LRP2BPQ9P2M1 347 aa16.38■□□□□ 0.21
DENND3-202ENST00000424248 USHBP1Q8N6Y0 703 aa16.38■□□□□ 0.21
DENND3-202ENST00000424248 CLIP2Q9UDT6 1046 aa16.38■□□□□ 0.21
DENND3-202ENST00000424248 IDH1O75874 414 aaKnown RBP16.38■□□□□ 0.21
DENND3-202ENST00000424248 CCAR1Q8IX12 1150 aaKnown RBP16.38■□□□□ 0.21
DENND3-202ENST00000424248 PTCD1O75127 700 aaKnown RBP16.38■□□□□ 0.21
DENND3-202ENST00000424248 ECHDC1Q9NTX5 307 aa16.38■□□□□ 0.21
DENND3-202ENST00000424248 TRAPPC8Q9Y2L5 1435 aa16.38■□□□□ 0.21
DENND3-202ENST00000424248 STX6O43752 255 aa16.37■□□□□ 0.21
DENND3-202ENST00000424248 KDM4AO75164 1064 aa16.37■□□□□ 0.21
DENND3-202ENST00000424248 IFIT1P09914 478 aaKnown RBP16.37■□□□□ 0.21
DENND3-202ENST00000424248 CCDC191Q8NCU4 936 aa16.37■□□□□ 0.21
DENND3-202ENST00000424248 SOGA3Q5TF21 947 aa16.37■□□□□ 0.21
DENND3-202ENST00000424248 PRPF40BQ6NWY9 871 aaKnown RBP16.37■□□□□ 0.21
DENND3-202ENST00000424248 KIAA0754O94854 1291 aa16.37■□□□□ 0.21
DENND3-202ENST00000424248 IFNL2Q8IZJ0 200 aa16.37■□□□□ 0.21
DENND3-202ENST00000424248 NUP133Q8WUM0 1156 aa16.37■□□□□ 0.21
DENND3-202ENST00000424248 TEX13AQ9BXU3 409 aaPredicted RBP16.37■□□□□ 0.21
DENND3-202ENST00000424248 RAI14Q9P0K7 980 aa16.37■□□□□ 0.21
DENND3-202ENST00000424248 CEBPAP49715 358 aaPredicted RBP16.37■□□□□ 0.21
DENND3-202ENST00000424248 EVI5LQ96CN4 794 aa16.36■□□□□ 0.21
DENND3-202ENST00000424248 BOLA2Q9H3K6 86 aa16.36■□□□□ 0.21
DENND3-202ENST00000424248 IFIT5Q13325 482 aaKnown RBP16.36■□□□□ 0.21
DENND3-202ENST00000424248 TTLL5Q6EMB2 1281 aa16.36■□□□□ 0.21
DENND3-202ENST00000424248 NUTM2BA6NNL0 878 aaPredicted RBP16.36■□□□□ 0.21
DENND3-202ENST00000424248 NUTM2EB1AL46 878 aaPredicted RBP16.36■□□□□ 0.21
DENND3-202ENST00000424248 PPP4R3BQ5MIZ7 849 aa16.36■□□□□ 0.21
DENND3-202ENST00000424248 NUTM2AQ8IVF1 878 aaPredicted RBP16.36■□□□□ 0.21
DENND3-202ENST00000424248 TERF1P54274 439 aa16.35■□□□□ 0.21
DENND3-202ENST00000424248 KRT28Q7Z3Y7 464 aa16.35■□□□□ 0.21
DENND3-202ENST00000424248 FERMT3Q86UX7 667 aa16.35■□□□□ 0.21
DENND3-202ENST00000424248 NOLC1Q14978 699 aaKnown RBP eCLIP16.35■□□□□ 0.21
DENND3-202ENST00000424248 CT47A1Q5JQC4 288 aaPredicted RBP16.35■□□□□ 0.21
DENND3-202ENST00000424248 KDM2BQ8NHM5 1336 aa16.35■□□□□ 0.21
DENND3-202ENST00000424248 RBM25P49756 843 aaKnown RBP16.34■□□□□ 0.21
DENND3-202ENST00000424248 CFAP100Q494V2 611 aa16.34■□□□□ 0.21
DENND3-202ENST00000424248 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
DENND3-202ENST00000424248 CCDC196A0A1B0GTZ2 297 aa16.34■□□□□ 0.21
DENND3-202ENST00000424248 A0A087WZG4 1122 aa16.34■□□□□ 0.21
DENND3-202ENST00000424248 CAMK4Q16566 473 aa16.34■□□□□ 0.21
DENND3-202ENST00000424248 DEF6Q9H4E7 631 aa16.34■□□□□ 0.21
DENND3-202ENST00000424248 CEP131Q9UPN4 1083 aa16.34■□□□□ 0.21
DENND3-202ENST00000424248 CCDC171Q6TFL3 1326 aa16.34■□□□□ 0.21
DENND3-202ENST00000424248 CADPS2Q86UW7 1296 aa16.34■□□□□ 0.21
DENND3-202ENST00000424248 TMX3Q96JJ7 454 aa16.34■□□□□ 0.21
DENND3-202ENST00000424248 ZNF287Q9HBT7 754 aa16.34■□□□□ 0.21
DENND3-202ENST00000424248 GOLGA6L9A6NEM1 432 aa16.33■□□□□ 0.21
DENND3-202ENST00000424248 BMS1Q14692 1282 aaKnown RBP16.33■□□□□ 0.21
DENND3-202ENST00000424248 PRDM10Q9NQV6 1147 aa16.33■□□□□ 0.21
DENND3-202ENST00000424248 GOLGA6L10A6NI86 522 aa16.33■□□□□ 0.2
DENND3-202ENST00000424248 RIMS2Q9UQ26 1411 aa16.33■□□□□ 0.2
DENND3-202ENST00000424248 UHRF1BP1Q6BDS2 1440 aa16.33■□□□□ 0.2
DENND3-202ENST00000424248 TUBB4AP04350 444 aa16.33■□□□□ 0.2
DENND3-202ENST00000424248 KRT18P05783 430 aaKnown RBP16.33■□□□□ 0.2
DENND3-202ENST00000424248 MCM3P25205 808 aa16.33■□□□□ 0.2
DENND3-202ENST00000424248 ARHGAP29Q52LW3 1261 aa16.33■□□□□ 0.2
DENND3-202ENST00000424248 PPIP5K1Q6PFW1 1433 aa16.33■□□□□ 0.2
DENND3-202ENST00000424248 BRPF1P55201 1214 aaPredicted RBP16.33■□□□□ 0.2
DENND3-202ENST00000424248 C16orf45Q96MC5 204 aaPredicted RBP16.33■□□□□ 0.2
DENND3-202ENST00000424248 DNMT1P26358 1616 aaKnown RBP16.32■□□□□ 0.2
DENND3-202ENST00000424248 MAP3K12Q12852 859 aa16.32■□□□□ 0.2
DENND3-202ENST00000424248 FAM83GA6ND36 823 aa16.32■□□□□ 0.2
DENND3-202ENST00000424248 EPB41L2O43491 1005 aaKnown RBP16.32■□□□□ 0.2
DENND3-202ENST00000424248 ZNF165P49910 485 aa16.32■□□□□ 0.2
DENND3-202ENST00000424248 ZFYVE9O95405 1425 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 236 ms