RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 TEFQ10587 303 aa24.82■■□□□ 1.56
SREBF1-206ENST00000423161 USPL1Q5W0Q7 1092 aa24.82■■□□□ 1.56
SREBF1-206ENST00000423161 FCHSD2O94868 740 aa24.81■■□□□ 1.56
SREBF1-206ENST00000423161 IL17REQ8NFR9 667 aa24.81■■□□□ 1.56
SREBF1-206ENST00000423161 POLRMTO00411 1230 aaKnown RBP24.8■■□□□ 1.56
SREBF1-206ENST00000423161 NRXN2Q9P2S2 1712 aa24.79■■□□□ 1.56
SREBF1-206ENST00000423161 KCNA3P22001 575 aa24.79■■□□□ 1.56
SREBF1-206ENST00000423161 TM4SF1P30408 202 aa24.79■■□□□ 1.56
SREBF1-206ENST00000423161 PRKAR2BP31323 418 aa24.79■■□□□ 1.56
SREBF1-206ENST00000423161 NARFQ9UHQ1 456 aa24.79■■□□□ 1.56
SREBF1-206ENST00000423161 RSPH6AQ9H0K4 717 aa24.78■■□□□ 1.56
SREBF1-206ENST00000423161 CANXP27824 592 aaKnown RBP24.77■■□□□ 1.56
SREBF1-206ENST00000423161 ZNF790Q6PG37 636 aa24.77■■□□□ 1.56
SREBF1-206ENST00000423161 ARHGAP27Q6ZUM4 889 aa24.77■■□□□ 1.56
SREBF1-206ENST00000423161 ZNF496Q96IT1 587 aaPredicted RBP24.77■■□□□ 1.56
SREBF1-206ENST00000423161 PHACTR3Q96KR7 559 aa24.77■■□□□ 1.56
SREBF1-206ENST00000423161 PIM2Q9P1W9 311 aa24.77■■□□□ 1.56
SREBF1-206ENST00000423161 NUDCQ9Y266 331 aa24.77■■□□□ 1.56
SREBF1-206ENST00000423161 HEG1Q9ULI3 1381 aa24.77■■□□□ 1.56
SREBF1-206ENST00000423161 STARD3NLO95772 234 aa24.76■■□□□ 1.55
SREBF1-206ENST00000423161 PPP2R1AP30153 589 aa24.76■■□□□ 1.55
SREBF1-206ENST00000423161 CEMIPQ8WUJ3 1361 aa24.76■■□□□ 1.55
SREBF1-206ENST00000423161 SCN7AQ01118 1682 aa24.75■■□□□ 1.55
SREBF1-206ENST00000423161 DLEC1Q9Y238 1755 aa24.75■■□□□ 1.55
SREBF1-206ENST00000423161 NFIXQ14938 502 aa24.74■■□□□ 1.55
SREBF1-206ENST00000423161 U2AF1L5P0DN76 240 aaPredicted RBP24.73■■□□□ 1.55
SREBF1-206ENST00000423161 CHRNA5P30532 468 aa24.73■■□□□ 1.55
SREBF1-206ENST00000423161 U2AF1Q01081 240 aaKnown RBP eCLIP24.73■■□□□ 1.55
SREBF1-206ENST00000423161 DALRD3Q5D0E6 543 aaKnown RBP24.73■■□□□ 1.55
SREBF1-206ENST00000423161 BCL2L12Q9HB09 334 aa24.73■■□□□ 1.55
SREBF1-206ENST00000423161 TEX13AQ9BXU3 409 aaPredicted RBP24.72■■□□□ 1.55
SREBF1-206ENST00000423161 SBF1O95248 1867 aa24.72■■□□□ 1.55
SREBF1-206ENST00000423161 EIF5P55010 431 aaKnown RBP24.71■■□□□ 1.55
SREBF1-206ENST00000423161 FMNL2Q96PY5 1086 aa24.71■■□□□ 1.55
SREBF1-206ENST00000423161 A0A087WZG4 1122 aa24.7■■□□□ 1.54
SREBF1-206ENST00000423161 BTBD11A6QL63 1104 aa24.69■■□□□ 1.54
SREBF1-206ENST00000423161 SERPINB2P05120 415 aa24.69■■□□□ 1.54
SREBF1-206ENST00000423161 ZNF330Q9Y3S2 320 aaPredicted RBP24.69■■□□□ 1.54
SREBF1-206ENST00000423161 DLG5Q8TDM6 1919 aa24.69■■□□□ 1.54
SREBF1-206ENST00000423161 ANKRD31Q8N7Z5 1873 aa24.68■■□□□ 1.54
SREBF1-206ENST00000423161 BCORQ6W2J9 1755 aa24.67■■□□□ 1.54
SREBF1-206ENST00000423161 KIF3CO14782 793 aa24.67■■□□□ 1.54
SREBF1-206ENST00000423161 KCNQ3O43525 872 aa24.67■■□□□ 1.54
SREBF1-206ENST00000423161 BICDL1Q6ZP65 573 aa24.67■■□□□ 1.54
SREBF1-206ENST00000423161 RTF1Q92541 710 aaKnown RBP24.67■■□□□ 1.54
SREBF1-206ENST00000423161 C9orf131Q5VYM1 1079 aa24.66■■□□□ 1.54
SREBF1-206ENST00000423161 CEP350Q5VT06 3117 aa24.65■■□□□ 1.54
SREBF1-206ENST00000423161 IL6STP40189 918 aaPredicted RBP24.65■■□□□ 1.54
SREBF1-206ENST00000423161 MCM10Q7L590 875 aa24.65■■□□□ 1.54
SREBF1-206ENST00000423161 CARMIL3Q8ND23 1372 aa24.65■■□□□ 1.54
SREBF1-206ENST00000423161 A1BGP04217 495 aa24.64■■□□□ 1.54
SREBF1-206ENST00000423161 TBC1D2BQ9UPU7 963 aa24.64■■□□□ 1.54
SREBF1-206ENST00000423161 TBC1D9BQ66K14 1250 aa24.63■■□□□ 1.53
SREBF1-206ENST00000423161 NPM2Q86SE8 214 aaKnown RBP24.63■■□□□ 1.53
SREBF1-206ENST00000423161 CCDC88AQ3V6T2 1871 aa24.63■■□□□ 1.53
SREBF1-206ENST00000423161 COL11A2P13942 1736 aaPredicted RBP24.61■■□□□ 1.53
SREBF1-206ENST00000423161 HSPA6P17066 643 aa24.61■■□□□ 1.53
SREBF1-206ENST00000423161 DCTN1Q14203 1278 aa24.61■■□□□ 1.53
SREBF1-206ENST00000423161 RNF181Q9P0P0 153 aa24.61■■□□□ 1.53
SREBF1-206ENST00000423161 C2CD5Q86YS7 1000 aa24.6■■□□□ 1.53
SREBF1-206ENST00000423161 LAMB4A4D0S4 1761 aa24.59■■□□□ 1.53
SREBF1-206ENST00000423161 HTATSF1O43719 755 aaKnown RBP24.59■■□□□ 1.53
SREBF1-206ENST00000423161 NMRK2Q9NPI5 230 aa24.59■■□□□ 1.53
SREBF1-206ENST00000423161 USP16Q9Y5T5 823 aa24.59■■□□□ 1.53
SREBF1-206ENST00000423161 CACNA1SQ13698 1873 aa24.59■■□□□ 1.53
SREBF1-206ENST00000423161 PRAMEF22A3QJZ6 481 aa24.58■■□□□ 1.53
SREBF1-206ENST00000423161 H0YIN7 160 aa24.58■■□□□ 1.53
SREBF1-206ENST00000423161 CAMTA2O94983 1202 aa24.58■■□□□ 1.53
SREBF1-206ENST00000423161 TTLL6Q8N841 843 aa24.58■■□□□ 1.53
SREBF1-206ENST00000423161 TNRC6CQ9HCJ0 1690 aaKnown RBP24.58■■□□□ 1.53
SREBF1-206ENST00000423161 NEFMP07197 916 aa24.57■■□□□ 1.52
SREBF1-206ENST00000423161 SNRPA1P09661 255 aaKnown RBP24.57■■□□□ 1.52
SREBF1-206ENST00000423161 PIP4K2AP48426 406 aaPredicted RBP24.57■■□□□ 1.52
SREBF1-206ENST00000423161 RASSF7Q02833 373 aa24.57■■□□□ 1.52
SREBF1-206ENST00000423161 DZIP3Q86Y13 1208 aaKnown RBP24.57■■□□□ 1.52
SREBF1-206ENST00000423161 KDM3BQ7LBC6 1761 aa24.57■■□□□ 1.52
SREBF1-206ENST00000423161 TIAM2Q8IVF5 1701 aa24.56■■□□□ 1.52
SREBF1-206ENST00000423161 TOMM70O94826 608 aa24.55■■□□□ 1.52
SREBF1-206ENST00000423161 PRR5LQ6MZQ0 368 aa24.55■■□□□ 1.52
SREBF1-206ENST00000423161 CCDC24Q8N4L8 307 aa24.54■■□□□ 1.52
SREBF1-206ENST00000423161 SETDB2Q96T68 719 aa24.54■■□□□ 1.52
SREBF1-206ENST00000423161 BRIP1Q9BX63 1249 aa24.54■■□□□ 1.52
SREBF1-206ENST00000423161 NPHP1O15259 732 aa24.53■■□□□ 1.52
SREBF1-206ENST00000423161 PDE6BP35913 854 aa24.53■■□□□ 1.52
SREBF1-206ENST00000423161 TAF7Q15545 349 aaPredicted RBP24.53■■□□□ 1.52
SREBF1-206ENST00000423161 CNBD1Q8NA66 436 aa24.53■■□□□ 1.52
SREBF1-206ENST00000423161 PDZRN3Q9UPQ7 1066 aa24.53■■□□□ 1.52
SREBF1-206ENST00000423161 KDM2BQ8NHM5 1336 aa24.53■■□□□ 1.52
SREBF1-206ENST00000423161 ARFGEF2Q9Y6D5 1785 aa24.52■■□□□ 1.52
SREBF1-206ENST00000423161 FER1L6Q2WGJ9 1857 aa24.52■■□□□ 1.52
SREBF1-206ENST00000423161 ZNF622Q969S3 477 aaKnown RBP eCLIP24.52■■□□□ 1.52
SREBF1-206ENST00000423161 DICER1Q9UPY3 1922 aaKnown RBP24.51■■□□□ 1.51
SREBF1-206ENST00000423161 LMNB1P20700 586 aa24.5■■□□□ 1.51
SREBF1-206ENST00000423161 C16orf71Q8IYS4 520 aaPredicted RBP24.5■■□□□ 1.51
SREBF1-206ENST00000423161 PLEKHF1Q96S99 279 aa24.5■■□□□ 1.51
SREBF1-206ENST00000423161 MIS18AQ9NYP9 233 aa24.5■■□□□ 1.51
SREBF1-206ENST00000423161 SLX4Q8IY92 1834 aa24.49■■□□□ 1.51
SREBF1-206ENST00000423161 ST5P78524 1137 aa24.49■■□□□ 1.51
SREBF1-206ENST00000423161 ZNF652Q9Y2D9 606 aa24.49■■□□□ 1.51
SREBF1-206ENST00000423161 ZC3H4Q9UPT8 1303 aaKnown RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms