RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 KCPQ6ZWJ8 1503 aa12.83□□□□□ -0.36
HDLBP-209ENST00000422933 RC3H1Q5TC82 1133 aaKnown RBP12.82□□□□□ -0.36
HDLBP-209ENST00000422933 FLAD1Q8NFF5 587 aa12.82□□□□□ -0.36
HDLBP-209ENST00000422933 CDCA7LQ96GN5 454 aa12.82□□□□□ -0.36
HDLBP-209ENST00000422933 CCDC87Q9NVE4 849 aa12.82□□□□□ -0.36
HDLBP-209ENST00000422933 C5P01031 1676 aa12.82□□□□□ -0.36
HDLBP-209ENST00000422933 ERBB4Q15303 1308 aa12.82□□□□□ -0.36
HDLBP-209ENST00000422933 TAF1LQ8IZX4 1826 aa12.81□□□□□ -0.36
HDLBP-209ENST00000422933 PROM2Q8N271 834 aa12.81□□□□□ -0.36
HDLBP-209ENST00000422933 TFCP2L1Q9NZI6 479 aa12.81□□□□□ -0.36
HDLBP-209ENST00000422933 RTCBQ9Y3I0 505 aaKnown RBP12.81□□□□□ -0.36
HDLBP-209ENST00000422933 CNTNAP4Q9C0A0 1308 aa12.81□□□□□ -0.36
HDLBP-209ENST00000422933 CACNA1FO60840 1977 aa12.8□□□□□ -0.36
HDLBP-209ENST00000422933 LAMB4A4D0S4 1761 aa12.8□□□□□ -0.36
HDLBP-209ENST00000422933 A0A087WZG4 1122 aa12.8□□□□□ -0.36
HDLBP-209ENST00000422933 CYP19A1P11511 503 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-209ENST00000422933 YY1P25490 414 aa12.8□□□□□ -0.36
HDLBP-209ENST00000422933 CRKLP46109 303 aaKnown RBP12.8□□□□□ -0.36
HDLBP-209ENST00000422933 KCNQ4P56696 695 aa12.8□□□□□ -0.36
HDLBP-209ENST00000422933 ITPK1Q13572 414 aa12.8□□□□□ -0.36
HDLBP-209ENST00000422933 TRMT2AQ8IZ69 625 aaKnown RBP12.8□□□□□ -0.36
HDLBP-209ENST00000422933 C8orf58Q8NAV2 365 aa12.8□□□□□ -0.36
HDLBP-209ENST00000422933 ARXQ96QS3 562 aa12.8□□□□□ -0.36
HDLBP-209ENST00000422933 SPINK5Q9NQ38 1064 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-209ENST00000422933 LRRC4BQ9NT99 713 aa12.8□□□□□ -0.36
HDLBP-209ENST00000422933 DBF4Q9UBU7 674 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-209ENST00000422933 ZNF330Q9Y3S2 320 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-209ENST00000422933 USP16Q9Y5T5 823 aa12.8□□□□□ -0.36
HDLBP-209ENST00000422933 GNPATO15228 680 aa12.79□□□□□ -0.36
HDLBP-209ENST00000422933 MSH5O43196 834 aa12.79□□□□□ -0.36
HDLBP-209ENST00000422933 CANXP27824 592 aaKnown RBP12.79□□□□□ -0.36
HDLBP-209ENST00000422933 LINC00116Q8NCU8 138 aa12.79□□□□□ -0.36
HDLBP-209ENST00000422933 SLC4A9Q96Q91 983 aa12.79□□□□□ -0.36
HDLBP-209ENST00000422933 HYPKQ9NX55 129 aa12.79□□□□□ -0.36
HDLBP-209ENST00000422933 CICQ96RK0 1608 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-209ENST00000422933 RPS6KA4O75676 772 aa12.78□□□□□ -0.36
HDLBP-209ENST00000422933 ADRA2BP18089 450 aa12.78□□□□□ -0.36
HDLBP-209ENST00000422933 IL6STP40189 918 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-209ENST00000422933 SLC15A2Q16348 729 aa12.78□□□□□ -0.36
HDLBP-209ENST00000422933 TRAPPC3LQ5T215 181 aa12.78□□□□□ -0.36
HDLBP-209ENST00000422933 NECTIN2Q92692 538 aa12.78□□□□□ -0.36
HDLBP-209ENST00000422933 C4BP0C0L5 1744 aa12.78□□□□□ -0.36
HDLBP-209ENST00000422933 COL5A3P25940 1745 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-209ENST00000422933 TJP1Q07157 1748 aa12.78□□□□□ -0.36
HDLBP-209ENST00000422933 VAMP4O75379 141 aa12.77□□□□□ -0.37
HDLBP-209ENST00000422933 DDX58O95786 925 aaKnown RBP12.77□□□□□ -0.37
HDLBP-209ENST00000422933 A1BGP04217 495 aa12.77□□□□□ -0.37
HDLBP-209ENST00000422933 MYL6BP14649 208 aa12.77□□□□□ -0.37
HDLBP-209ENST00000422933 SSFA2P28290 1259 aa12.77□□□□□ -0.37
HDLBP-209ENST00000422933 RFC4P35249 363 aa12.77□□□□□ -0.37
HDLBP-209ENST00000422933 KRT24Q2M2I5 525 aa12.77□□□□□ -0.37
HDLBP-209ENST00000422933 KIF6Q6ZMV9 814 aa12.77□□□□□ -0.37
HDLBP-209ENST00000422933 SPON1Q9HCB6 807 aa12.77□□□□□ -0.37
HDLBP-209ENST00000422933 DDX21Q9NR30 783 aaKnown RBP eCLIP12.77□□□□□ -0.37
HDLBP-209ENST00000422933 CHD4Q14839 1912 aa12.76□□□□□ -0.37
HDLBP-209ENST00000422933 PRAMEF22A3QJZ6 481 aa12.76□□□□□ -0.37
HDLBP-209ENST00000422933 ZPR1O75312 459 aa12.76□□□□□ -0.37
HDLBP-209ENST00000422933 PTGER2P43116 358 aa12.76□□□□□ -0.37
HDLBP-209ENST00000422933 ALDH1L2Q3SY69 923 aa12.76□□□□□ -0.37
HDLBP-209ENST00000422933 TSPYL6Q8N831 410 aa12.76□□□□□ -0.37
HDLBP-209ENST00000422933 PHF14O94880 888 aa12.75□□□□□ -0.37
HDLBP-209ENST00000422933 SLC4A2P04920 1241 aa12.75□□□□□ -0.37
HDLBP-209ENST00000422933 UTRNP46939 3433 aa12.75□□□□□ -0.37
HDLBP-209ENST00000422933 INTS5Q6P9B9 1019 aaKnown RBP12.75□□□□□ -0.37
HDLBP-209ENST00000422933 AKT1S1Q96B36 256 aa12.75□□□□□ -0.37
HDLBP-209ENST00000422933 CHPF2Q9P2E5 772 aa12.75□□□□□ -0.37
HDLBP-209ENST00000422933 ZBTB1Q9Y2K1 713 aa12.75□□□□□ -0.37
HDLBP-209ENST00000422933 SMC4Q9NTJ3 1288 aa12.74□□□□□ -0.37
HDLBP-209ENST00000422933 ZNF652Q9Y2D9 606 aa12.74□□□□□ -0.37
HDLBP-209ENST00000422933 MYH14Q7Z406 1995 aaKnown RBP12.74□□□□□ -0.37
HDLBP-209ENST00000422933 TUBGCP6Q96RT7 1819 aa12.74□□□□□ -0.37
HDLBP-209ENST00000422933 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.73□□□□□ -0.37
HDLBP-209ENST00000422933 IPO8O15397 1037 aaKnown RBP12.73□□□□□ -0.37
HDLBP-209ENST00000422933 ZBTB7AO95365 584 aa12.73□□□□□ -0.37
HDLBP-209ENST00000422933 AIMP1Q12904 312 aaKnown RBP12.73□□□□□ -0.37
HDLBP-209ENST00000422933 DZIP3Q86Y13 1208 aaKnown RBP12.73□□□□□ -0.37
HDLBP-209ENST00000422933 COL15A1P39059 1388 aa12.72□□□□□ -0.37
HDLBP-209ENST00000422933 KIF16BQ96L93 1317 aa12.72□□□□□ -0.37
HDLBP-209ENST00000422933 CENPBP07199 599 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-209ENST00000422933 EIF5P55010 431 aaKnown RBP12.72□□□□□ -0.37
HDLBP-209ENST00000422933 ZNF827Q17R98 1081 aa12.72□□□□□ -0.37
HDLBP-209ENST00000422933 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-209ENST00000422933 SLC16A10Q8TF71 515 aa12.72□□□□□ -0.37
HDLBP-209ENST00000422933 SGIP1Q9BQI5 828 aa12.72□□□□□ -0.37
HDLBP-209ENST00000422933 UBR3Q6ZT12 1888 aa12.72□□□□□ -0.37
HDLBP-209ENST00000422933 COL24A1Q17RW2 1714 aa12.71□□□□□ -0.37
HDLBP-209ENST00000422933 QSER1Q2KHR3 1735 aa12.71□□□□□ -0.37
HDLBP-209ENST00000422933 NBPF26B4DH59 902 aa12.71□□□□□ -0.37
HDLBP-209ENST00000422933 TCERG1O14776 1098 aaKnown RBP12.71□□□□□ -0.37
HDLBP-209ENST00000422933 PIP4K2AP48426 406 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-209ENST00000422933 FKBP5Q13451 457 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-209ENST00000422933 HSP90AB3PQ58FF7 597 aa12.71□□□□□ -0.37
HDLBP-209ENST00000422933 NBPF10Q6P3W6 841 aaKnown RBP12.71□□□□□ -0.37
HDLBP-209ENST00000422933 COPS6Q7L5N1 327 aa12.71□□□□□ -0.37
HDLBP-209ENST00000422933 RIC3Q7Z5B4 369 aa12.71□□□□□ -0.37
HDLBP-209ENST00000422933 NBPF15Q8N660 670 aa12.71□□□□□ -0.37
HDLBP-209ENST00000422933 ARHGEF1Q92888 912 aaKnown RBP12.71□□□□□ -0.37
HDLBP-209ENST00000422933 PPP1R1BQ9UD71 204 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-209ENST00000422933 RCAN3Q9UKA8 241 aa12.71□□□□□ -0.37
HDLBP-209ENST00000422933 ERVV-1B6SEH8 477 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms