RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 RIPK4P57078 832 aa19.49■□□□□ 0.71
FAM3A-209ENST00000421517 DCTN1Q14203 1278 aa19.49■□□□□ 0.71
FAM3A-209ENST00000421517 DLG5Q8TDM6 1919 aa19.49■□□□□ 0.71
FAM3A-209ENST00000421517 ANP32CO43423 234 aa19.48■□□□□ 0.71
FAM3A-209ENST00000421517 IL6STP40189 918 aaPredicted RBP19.48■□□□□ 0.71
FAM3A-209ENST00000421517 EIF5P55010 431 aaKnown RBP19.48■□□□□ 0.71
FAM3A-209ENST00000421517 RGL2O15211 777 aa19.47■□□□□ 0.71
FAM3A-209ENST00000421517 NCBP3Q53F19 620 aaKnown RBP19.47■□□□□ 0.71
FAM3A-209ENST00000421517 MSL1Q68DK7 614 aa19.47■□□□□ 0.71
FAM3A-209ENST00000421517 NARFQ9UHQ1 456 aa19.47■□□□□ 0.71
FAM3A-209ENST00000421517 ZBTB1Q9Y2K1 713 aa19.47■□□□□ 0.71
FAM3A-209ENST00000421517 C4AP0C0L4 1744 aa19.47■□□□□ 0.71
FAM3A-209ENST00000421517 COL15A1P39059 1388 aa19.46■□□□□ 0.71
FAM3A-209ENST00000421517 SMIM5Q71RC9 77 aa19.46■□□□□ 0.71
FAM3A-209ENST00000421517 KCNQ3O43525 872 aa19.45■□□□□ 0.7
FAM3A-209ENST00000421517 ZPR1O75312 459 aa19.45■□□□□ 0.7
FAM3A-209ENST00000421517 KDM3BQ7LBC6 1761 aa19.44■□□□□ 0.7
FAM3A-209ENST00000421517 MMP10P09238 476 aa19.44■□□□□ 0.7
FAM3A-209ENST00000421517 TM4SF1P30408 202 aa19.43■□□□□ 0.7
FAM3A-209ENST00000421517 EIF4A1P60842 406 aaKnown RBP19.43■□□□□ 0.7
FAM3A-209ENST00000421517 USP16Q9Y5T5 823 aa19.42■□□□□ 0.7
FAM3A-209ENST00000421517 GIGYF1O75420 1035 aaPredicted RBP19.41■□□□□ 0.7
FAM3A-209ENST00000421517 TGFB2P61812 414 aa19.41■□□□□ 0.7
FAM3A-209ENST00000421517 TRIM35Q9UPQ4 493 aa19.41■□□□□ 0.7
FAM3A-209ENST00000421517 PARP3Q9Y6F1 533 aa19.41■□□□□ 0.7
FAM3A-209ENST00000421517 CANXP27824 592 aaKnown RBP19.4■□□□□ 0.7
FAM3A-209ENST00000421517 USPL1Q5W0Q7 1092 aa19.4■□□□□ 0.7
FAM3A-209ENST00000421517 NPM2Q86SE8 214 aaKnown RBP19.4■□□□□ 0.7
FAM3A-209ENST00000421517 CCDC146Q8IYE0 955 aa19.4■□□□□ 0.7
FAM3A-209ENST00000421517 ERBB4Q15303 1308 aa19.4■□□□□ 0.7
FAM3A-209ENST00000421517 KIF13BQ9NQT8 1826 aa19.39■□□□□ 0.7
FAM3A-209ENST00000421517 CHL1O00533 1208 aa19.39■□□□□ 0.69
FAM3A-209ENST00000421517 CALD1Q05682 793 aaKnown RBP19.39■□□□□ 0.69
FAM3A-209ENST00000421517 FKBP8Q14318 412 aa19.39■□□□□ 0.69
FAM3A-209ENST00000421517 SRP68Q9UHB9 627 aaKnown RBP19.39■□□□□ 0.69
FAM3A-209ENST00000421517 C10orf71Q711Q0 1435 aa19.39■□□□□ 0.69
FAM3A-209ENST00000421517 A1BGP04217 495 aa19.38■□□□□ 0.69
FAM3A-209ENST00000421517 CLEC4GQ6UXB4 293 aa19.38■□□□□ 0.69
FAM3A-209ENST00000421517 NLGN2Q8NFZ4 835 aa19.38■□□□□ 0.69
FAM3A-209ENST00000421517 THUMPD2Q9BTF0 503 aaKnown RBP19.38■□□□□ 0.69
FAM3A-209ENST00000421517 TSPYL4Q9UJ04 414 aa19.38■□□□□ 0.69
FAM3A-209ENST00000421517 LAMB4A4D0S4 1761 aa19.37■□□□□ 0.69
FAM3A-209ENST00000421517 CCDC27Q2M243 656 aa19.37■□□□□ 0.69
FAM3A-209ENST00000421517 BCL2L12Q9HB09 334 aa19.37■□□□□ 0.69
FAM3A-209ENST00000421517 MIS18AQ9NYP9 233 aa19.37■□□□□ 0.69
FAM3A-209ENST00000421517 POLRMTO00411 1230 aaKnown RBP19.36■□□□□ 0.69
FAM3A-209ENST00000421517 GRIN3BO60391 1043 aa19.36■□□□□ 0.69
FAM3A-209ENST00000421517 CFAP44Q96MT7 982 aa19.36■□□□□ 0.69
FAM3A-209ENST00000421517 HOXB7P09629 217 aa19.35■□□□□ 0.69
FAM3A-209ENST00000421517 KLHL34Q8N239 644 aa19.35■□□□□ 0.69
FAM3A-209ENST00000421517 SCN7AQ01118 1682 aa19.34■□□□□ 0.69
FAM3A-209ENST00000421517 PRAMEF22A3QJZ6 481 aa19.34■□□□□ 0.69
FAM3A-209ENST00000421517 APAF1O14727 1248 aa19.34■□□□□ 0.69
FAM3A-209ENST00000421517 CAMTA2O94983 1202 aa19.34■□□□□ 0.69
FAM3A-209ENST00000421517 DDR1Q08345 913 aa19.34■□□□□ 0.69
FAM3A-209ENST00000421517 NEUROD2Q15784 382 aa19.34■□□□□ 0.69
FAM3A-209ENST00000421517 MRS2Q9HD23 443 aa19.34■□□□□ 0.69
FAM3A-209ENST00000421517 RRP7AQ9Y3A4 280 aaKnown RBP19.34■□□□□ 0.69
FAM3A-209ENST00000421517 NRXN2Q9P2S2 1712 aa19.34■□□□□ 0.69
FAM3A-209ENST00000421517 NBPF26B4DH59 902 aa19.33■□□□□ 0.68
FAM3A-209ENST00000421517 ZNF853P0CG23 659 aa19.33■□□□□ 0.68
FAM3A-209ENST00000421517 NFIXQ14938 502 aa19.33■□□□□ 0.68
FAM3A-209ENST00000421517 GPR162Q16538 588 aa19.33■□□□□ 0.68
FAM3A-209ENST00000421517 CCDC184Q52MB2 194 aa19.33■□□□□ 0.68
FAM3A-209ENST00000421517 NBPF10Q6P3W6 841 aaKnown RBP19.33■□□□□ 0.68
FAM3A-209ENST00000421517 DZIP3Q86Y13 1208 aaKnown RBP19.33■□□□□ 0.68
FAM3A-209ENST00000421517 NGEFQ8N5V2 710 aa19.33■□□□□ 0.68
FAM3A-209ENST00000421517 NBPF15Q8N660 670 aa19.33■□□□□ 0.68
FAM3A-209ENST00000421517 ERVV-1B6SEH8 477 aa19.32■□□□□ 0.68
FAM3A-209ENST00000421517 IFT57Q9NWB7 429 aa19.32■□□□□ 0.68
FAM3A-209ENST00000421517 PDZRN3Q9UPQ7 1066 aa19.32■□□□□ 0.68
FAM3A-209ENST00000421517 ZNF652Q9Y2D9 606 aa19.32■□□□□ 0.68
FAM3A-209ENST00000421517 PXDNLA1KZ92 1463 aa19.32■□□□□ 0.68
FAM3A-209ENST00000421517 TBC1D2BQ9UPU7 963 aa19.31■□□□□ 0.68
FAM3A-209ENST00000421517 CARMIL3Q8ND23 1372 aa19.31■□□□□ 0.68
FAM3A-209ENST00000421517 UTRNP46939 3433 aa19.3■□□□□ 0.68
FAM3A-209ENST00000421517 BCORQ6W2J9 1755 aa19.3■□□□□ 0.68
FAM3A-209ENST00000421517 SERPINB2P05120 415 aa19.3■□□□□ 0.68
FAM3A-209ENST00000421517 GNAI1P63096 354 aa19.3■□□□□ 0.68
FAM3A-209ENST00000421517 CHMP4AQ9BY43 222 aa19.3■□□□□ 0.68
FAM3A-209ENST00000421517 KIAA1551Q9HCM1 1747 aa19.29■□□□□ 0.68
FAM3A-209ENST00000421517 TBC1D9BQ66K14 1250 aa19.28■□□□□ 0.68
FAM3A-209ENST00000421517 SETDB2Q96T68 719 aa19.28■□□□□ 0.68
FAM3A-209ENST00000421517 YBX3P16989 372 aaKnown RBP eCLIP19.27■□□□□ 0.686e-6■□□□□ 10.6
FAM3A-209ENST00000421517 ZNF330Q9Y3S2 320 aaPredicted RBP19.27■□□□□ 0.68
FAM3A-209ENST00000421517 GOLGB1Q14789 3259 aaKnown RBP19.27■□□□□ 0.67
FAM3A-209ENST00000421517 IL16Q14005 1332 aa19.26■□□□□ 0.67
FAM3A-209ENST00000421517 KCNA3P22001 575 aa19.26■□□□□ 0.67
FAM3A-209ENST00000421517 LRP10Q7Z4F1 713 aa19.26■□□□□ 0.67
FAM3A-209ENST00000421517 PDIA6Q15084 440 aa19.25■□□□□ 0.67
FAM3A-209ENST00000421517 BRIP1Q9BX63 1249 aa19.25■□□□□ 0.67
FAM3A-209ENST00000421517 MAP3K15Q6ZN16 1313 aa19.25■□□□□ 0.67
FAM3A-209ENST00000421517 YY1P25490 414 aa19.24■□□□□ 0.67
FAM3A-209ENST00000421517 WWC1Q8IX03 1113 aa19.24■□□□□ 0.67
FAM3A-209ENST00000421517 MBIPQ9NS73 344 aa19.24■□□□□ 0.67
FAM3A-209ENST00000421517 PIM2Q9P1W9 311 aa19.24■□□□□ 0.67
FAM3A-209ENST00000421517 ATP10DQ9P241 1426 aa19.24■□□□□ 0.67
FAM3A-209ENST00000421517 AFDNP55196 1824 aaKnown RBP19.23■□□□□ 0.67
FAM3A-209ENST00000421517 DPEP1P16444 411 aa19.23■□□□□ 0.67
FAM3A-209ENST00000421517 PIP4K2AP48426 406 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms