RNA–Protein interactions for RNA: ENST00000420774.1

AC004540.1-205, humanhuman

TSL 2

Gene AC004540.1, Length 496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-205ENST00000420774 TSR2Q969E8 191 aaKnown RBP16.54■□□□□ 0.24
AC004540.1-205ENST00000420774 SPINK5Q9NQ38 1064 aaPredicted RBP16.54■□□□□ 0.24
AC004540.1-205ENST00000420774 IFT57Q9NWB7 429 aa16.54■□□□□ 0.24
AC004540.1-205ENST00000420774 USP16Q9Y5T5 823 aa16.54■□□□□ 0.24
AC004540.1-205ENST00000420774 ZNF521Q96K83 1311 aa16.53■□□□□ 0.24
AC004540.1-205ENST00000420774 CALD1Q05682 793 aaKnown RBP16.53■□□□□ 0.24
AC004540.1-205ENST00000420774 INTS5Q6P9B9 1019 aaKnown RBP16.53■□□□□ 0.24
AC004540.1-205ENST00000420774 BABAM1Q9NWV8 329 aa16.53■□□□□ 0.24
AC004540.1-205ENST00000420774 ZBTB1Q9Y2K1 713 aa16.53■□□□□ 0.24
AC004540.1-205ENST00000420774 GIGYF1O75420 1035 aaPredicted RBP16.52■□□□□ 0.24
AC004540.1-205ENST00000420774 SNRPA1P09661 255 aaKnown RBP16.52■□□□□ 0.24
AC004540.1-205ENST00000420774 PIP4K2AP48426 406 aaPredicted RBP16.52■□□□□ 0.24
AC004540.1-205ENST00000420774 GNAI1P63096 354 aa16.52■□□□□ 0.24
AC004540.1-205ENST00000420774 RC3H1Q5TC82 1133 aaKnown RBP16.51■□□□□ 0.23
AC004540.1-205ENST00000420774 COL23A1Q86Y22 540 aaPredicted RBP16.51■□□□□ 0.23
AC004540.1-205ENST00000420774 CCDC87Q9NVE4 849 aa16.51■□□□□ 0.23
AC004540.1-205ENST00000420774 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.5■□□□□ 0.23
AC004540.1-205ENST00000420774 A1BGP04217 495 aa16.5■□□□□ 0.23
AC004540.1-205ENST00000420774 CANXP27824 592 aaKnown RBP16.5■□□□□ 0.23
AC004540.1-205ENST00000420774 WDR63Q8IWG1 891 aa16.5■□□□□ 0.23
AC004540.1-205ENST00000420774 SRCAPQ6ZRS2 3230 aa16.5■□□□□ 0.23
AC004540.1-205ENST00000420774 IL16Q14005 1332 aa16.49■□□□□ 0.23
AC004540.1-205ENST00000420774 FANCIQ9NVI1 1328 aa16.49■□□□□ 0.23
AC004540.1-205ENST00000420774 STARD3NLO95772 234 aa16.49■□□□□ 0.23
AC004540.1-205ENST00000420774 NGEFQ8N5V2 710 aa16.49■□□□□ 0.23
AC004540.1-205ENST00000420774 TEX13AQ9BXU3 409 aaPredicted RBP16.49■□□□□ 0.23
AC004540.1-205ENST00000420774 RTCBQ9Y3I0 505 aaKnown RBP16.49■□□□□ 0.23
AC004540.1-205ENST00000420774 SOS1Q07889 1333 aaPredicted RBP16.48■□□□□ 0.23
AC004540.1-205ENST00000420774 RPS6KA4O75676 772 aa16.48■□□□□ 0.23
AC004540.1-205ENST00000420774 ZBTB7AO95365 584 aa16.48■□□□□ 0.23
AC004540.1-205ENST00000420774 SSFA2P28290 1259 aa16.48■□□□□ 0.23
AC004540.1-205ENST00000420774 HNRNPUQ00839 825 aaKnown RBP eCLIP16.48■□□□□ 0.23
AC004540.1-205ENST00000420774 NECTIN2Q92692 538 aa16.48■□□□□ 0.23
AC004540.1-205ENST00000420774 NBPF26B4DH59 902 aa16.47■□□□□ 0.23
AC004540.1-205ENST00000420774 ELL2O00472 640 aaPredicted RBP16.47■□□□□ 0.23
AC004540.1-205ENST00000420774 EIF2S2P20042 333 aaKnown RBP16.47■□□□□ 0.23
AC004540.1-205ENST00000420774 HMGB2P26583 209 aaKnown RBP16.47■□□□□ 0.23
AC004540.1-205ENST00000420774 NBPF10Q6P3W6 841 aaKnown RBP16.47■□□□□ 0.23
AC004540.1-205ENST00000420774 NBPF15Q8N660 670 aa16.47■□□□□ 0.23
AC004540.1-205ENST00000420774 C8orf58Q8NAV2 365 aa16.47■□□□□ 0.23
AC004540.1-205ENST00000420774 ZNF330Q9Y3S2 320 aaPredicted RBP16.47■□□□□ 0.23
AC004540.1-205ENST00000420774 COL15A1P39059 1388 aa16.47■□□□□ 0.23
AC004540.1-205ENST00000420774 COL24A1Q17RW2 1714 aa16.46■□□□□ 0.23
AC004540.1-205ENST00000420774 DUSP27Q5VZP5 1158 aa16.46■□□□□ 0.23
AC004540.1-205ENST00000420774 TSPYL6Q8N831 410 aa16.46■□□□□ 0.23
AC004540.1-205ENST00000420774 ARHGEF1Q92888 912 aaKnown RBP16.46■□□□□ 0.23
AC004540.1-205ENST00000420774 CDCA7LQ96GN5 454 aa16.46■□□□□ 0.23
AC004540.1-205ENST00000420774 BCORQ6W2J9 1755 aa16.46■□□□□ 0.22
AC004540.1-205ENST00000420774 TRAPPC3LQ5T215 181 aa16.45■□□□□ 0.22
AC004540.1-205ENST00000420774 MSL1Q68DK7 614 aa16.45■□□□□ 0.22
AC004540.1-205ENST00000420774 SCN7AQ01118 1682 aa16.45■□□□□ 0.22
AC004540.1-205ENST00000420774 ANXA1P04083 346 aa16.44■□□□□ 0.22
AC004540.1-205ENST00000420774 EIF5P55010 431 aaKnown RBP16.44■□□□□ 0.22
AC004540.1-205ENST00000420774 GOLGA2Q08379 1002 aa16.44■□□□□ 0.22
AC004540.1-205ENST00000420774 SRP68Q9UHB9 627 aaKnown RBP16.44■□□□□ 0.22
AC004540.1-205ENST00000420774 ATF5Q9Y2D1 282 aaPredicted RBP16.44■□□□□ 0.22
AC004540.1-205ENST00000420774 MYL6BP14649 208 aa16.43■□□□□ 0.22
AC004540.1-205ENST00000420774 EXOSC9Q06265 439 aaKnown RBP16.43■□□□□ 0.22
AC004540.1-205ENST00000420774 PROSER3Q2NL68 480 aa16.43■□□□□ 0.22
AC004540.1-205ENST00000420774 FLAD1Q8NFF5 587 aa16.43■□□□□ 0.22
AC004540.1-205ENST00000420774 RFC4P35249 363 aa16.42■□□□□ 0.22
AC004540.1-205ENST00000420774 IL6STP40189 918 aaPredicted RBP16.42■□□□□ 0.22
AC004540.1-205ENST00000420774 PDIA6Q15084 440 aa16.42■□□□□ 0.22
AC004540.1-205ENST00000420774 HDGFL1Q5TGJ6 251 aa16.42■□□□□ 0.22
AC004540.1-205ENST00000420774 PPP4R3CPQ6ZMV5 832 aa16.42■□□□□ 0.22
AC004540.1-205ENST00000420774 MYH16Q9H6N6 1097 aa16.42■□□□□ 0.22
AC004540.1-205ENST00000420774 LRP5O75197 1615 aa16.41■□□□□ 0.22
AC004540.1-205ENST00000420774 SLFN5Q08AF3 891 aa16.41■□□□□ 0.22
AC004540.1-205ENST00000420774 MTFR1LQ9H019 292 aa16.41■□□□□ 0.22
AC004540.1-205ENST00000420774 CHPF2Q9P2E5 772 aa16.41■□□□□ 0.22
AC004540.1-205ENST00000420774 TBC1D2BQ9UPU7 963 aa16.41■□□□□ 0.22
AC004540.1-205ENST00000420774 USP42Q9H9J4 1324 aaKnown RBP16.41■□□□□ 0.22
AC004540.1-205ENST00000420774 E9PSI1 815 aa16.4■□□□□ 0.22
AC004540.1-205ENST00000420774 TCERG1O14776 1098 aaKnown RBP16.4■□□□□ 0.22
AC004540.1-205ENST00000420774 HOXB7P09629 217 aa16.4■□□□□ 0.22
AC004540.1-205ENST00000420774 TWISTNBQ3B726 338 aaPredicted RBP16.4■□□□□ 0.22
AC004540.1-205ENST00000420774 USPL1Q5W0Q7 1092 aa16.4■□□□□ 0.22
AC004540.1-205ENST00000420774 LRP10Q7Z4F1 713 aa16.4■□□□□ 0.22
AC004540.1-205ENST00000420774 ARXQ96QS3 562 aa16.4■□□□□ 0.22
AC004540.1-205ENST00000420774 GYS1P13807 737 aa16.39■□□□□ 0.21
AC004540.1-205ENST00000420774 SLC16A10Q8TF71 515 aa16.39■□□□□ 0.21
AC004540.1-205ENST00000420774 NARFQ9UHQ1 456 aa16.39■□□□□ 0.21
AC004540.1-205ENST00000420774 NUP98P52948 1817 aa16.39■□□□□ 0.21
AC004540.1-205ENST00000420774 PTGER2P43116 358 aa16.38■□□□□ 0.21
AC004540.1-205ENST00000420774 TTLL7Q6ZT98 887 aa16.38■□□□□ 0.21
AC004540.1-205ENST00000420774 DZIP3Q86Y13 1208 aaKnown RBP16.38■□□□□ 0.21
AC004540.1-205ENST00000420774 BCL2L12Q9HB09 334 aa16.38■□□□□ 0.21
AC004540.1-205ENST00000420774 SPON1Q9HCB6 807 aa16.38■□□□□ 0.21
AC004540.1-205ENST00000420774 ERBB4Q15303 1308 aa16.38■□□□□ 0.21
AC004540.1-205ENST00000420774 ZBED9Q6R2W3 1325 aa16.38■□□□□ 0.21
AC004540.1-205ENST00000420774 ZPR1O75312 459 aa16.37■□□□□ 0.21
AC004540.1-205ENST00000420774 VAMP4O75379 141 aa16.37■□□□□ 0.21
AC004540.1-205ENST00000420774 FKBP8Q14318 412 aa16.37■□□□□ 0.21
AC004540.1-205ENST00000420774 TRMT2AQ8IZ69 625 aaKnown RBP16.37■□□□□ 0.21
AC004540.1-205ENST00000420774 SGIP1Q9BQI5 828 aa16.37■□□□□ 0.21
AC004540.1-205ENST00000420774 AFDNP55196 1824 aaKnown RBP16.36■□□□□ 0.21
AC004540.1-205ENST00000420774 A0A087WZG4 1122 aa16.36■□□□□ 0.21
AC004540.1-205ENST00000420774 CAMTA2O94983 1202 aa16.36■□□□□ 0.21
AC004540.1-205ENST00000420774 NPM2Q86SE8 214 aaKnown RBP16.36■□□□□ 0.21
AC004540.1-205ENST00000420774 DDX21Q9NR30 783 aaKnown RBP eCLIP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms