RNA–Protein interactions for RNA: ENST00000420329.6

CRTC3-202, Transcript of CREB regulated transcription coactivator 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CRTC3, Length 5,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-202ENST00000420329 DDX19AQ9NUU7 478 aaKnown RBP19.39■□□□□ 0.69
CRTC3-202ENST00000420329 GIMAP6Q6P9H5 292 aa19.39■□□□□ 0.69
CRTC3-202ENST00000420329 CLIP2Q9UDT6 1046 aa19.39■□□□□ 0.69
CRTC3-202ENST00000420329 CBFA2T2O43439 604 aa19.39■□□□□ 0.69
CRTC3-202ENST00000420329 MYD88Q99836 296 aa19.39■□□□□ 0.69
CRTC3-202ENST00000420329 PRDM10Q9NQV6 1147 aa19.39■□□□□ 0.69
CRTC3-202ENST00000420329 AMOTL2Q9Y2J4 779 aa19.39■□□□□ 0.69
CRTC3-202ENST00000420329 U3KPZ7 1027 aaPredicted RBP19.39■□□□□ 0.69
CRTC3-202ENST00000420329 ZC3H6P61129 1189 aaKnown RBP19.38■□□□□ 0.69
CRTC3-202ENST00000420329 PTPN14Q15678 1187 aa19.38■□□□□ 0.69
CRTC3-202ENST00000420329 SMARCE1Q969G3 411 aa19.38■□□□□ 0.69
CRTC3-202ENST00000420329 CEP89Q96ST8 783 aa19.38■□□□□ 0.69
CRTC3-202ENST00000420329 CBX1P83916 185 aa19.38■□□□□ 0.69
CRTC3-202ENST00000420329 ANO10Q9NW15 660 aa19.38■□□□□ 0.69
CRTC3-202ENST00000420329 RAD21O60216 631 aa19.38■□□□□ 0.69
CRTC3-202ENST00000420329 USP48Q86UV5 1035 aa19.38■□□□□ 0.69
CRTC3-202ENST00000420329 EIF4A2Q14240 407 aaKnown RBP19.38■□□□□ 0.69
CRTC3-202ENST00000420329 CNPY2Q9Y2B0 182 aa19.38■□□□□ 0.69
CRTC3-202ENST00000420329 CDKL5O76039 1030 aa19.38■□□□□ 0.69
CRTC3-202ENST00000420329 C16orf45Q96MC5 204 aaPredicted RBP19.38■□□□□ 0.69
CRTC3-202ENST00000420329 USP26Q9BXU7 913 aa19.38■□□□□ 0.69
CRTC3-202ENST00000420329 TRIM35Q9UPQ4 493 aa19.38■□□□□ 0.69
CRTC3-202ENST00000420329 MTMR7Q9Y216 660 aa19.38■□□□□ 0.69
CRTC3-202ENST00000420329 ANXA1P04083 346 aa19.37■□□□□ 0.69
CRTC3-202ENST00000420329 NAP1L1P55209 391 aaKnown RBP19.37■□□□□ 0.69
CRTC3-202ENST00000420329 GUCY1B3Q02153 619 aa19.37■□□□□ 0.69
CRTC3-202ENST00000420329 ZKSCAN5Q9Y2L8 839 aa19.37■□□□□ 0.69
CRTC3-202ENST00000420329 IMMTQ16891 758 aaKnown RBP19.37■□□□□ 0.69
CRTC3-202ENST00000420329 CCDC85AQ96PX6 553 aaPredicted RBP19.37■□□□□ 0.69
CRTC3-202ENST00000420329 RUFY1Q96T51 708 aa19.37■□□□□ 0.69
CRTC3-202ENST00000420329 SMTNL1A8MU46 457 aa19.37■□□□□ 0.69
CRTC3-202ENST00000420329 AMOTQ4VCS5 1084 aa19.37■□□□□ 0.69
CRTC3-202ENST00000420329 DACH1Q9UI36 760 aa19.37■□□□□ 0.69
CRTC3-202ENST00000420329 CCDC69A6NI79 296 aa19.36■□□□□ 0.69
CRTC3-202ENST00000420329 DYNC1I1O14576 645 aa19.36■□□□□ 0.69
CRTC3-202ENST00000420329 SFPQP23246 707 aaKnown RBP eCLIP19.36■□□□□ 0.69
CRTC3-202ENST00000420329 ATP8B2P98198 1209 aa19.36■□□□□ 0.69
CRTC3-202ENST00000420329 CAGE1Q8TC20 777 aa19.36■□□□□ 0.69
CRTC3-202ENST00000420329 ZNF830Q96NB3 372 aaPredicted RBP19.36■□□□□ 0.69
CRTC3-202ENST00000420329 MAP3K2Q9Y2U5 619 aa19.36■□□□□ 0.69
CRTC3-202ENST00000420329 KDM5CP41229 1560 aa19.36■□□□□ 0.69
CRTC3-202ENST00000420329 MAST1Q9Y2H9 1570 aa19.36■□□□□ 0.69
CRTC3-202ENST00000420329 PPIP5K1Q6PFW1 1433 aa19.36■□□□□ 0.69
CRTC3-202ENST00000420329 ZSCAN25Q6NSZ9 544 aa19.36■□□□□ 0.69
CRTC3-202ENST00000420329 PPFIBP1Q86W92 1011 aa19.36■□□□□ 0.69
CRTC3-202ENST00000420329 SETQ01105 290 aaPredicted RBP19.36■□□□□ 0.69
CRTC3-202ENST00000420329 TNNT1P13805 278 aa19.35■□□□□ 0.69
CRTC3-202ENST00000420329 CFAP100Q494V2 611 aa19.35■□□□□ 0.69
CRTC3-202ENST00000420329 NECAB1Q8N987 351 aa19.35■□□□□ 0.69
CRTC3-202ENST00000420329 NACAP1Q9BZK3 213 aa19.35■□□□□ 0.69
CRTC3-202ENST00000420329 ZNF165P49910 485 aa19.35■□□□□ 0.69
CRTC3-202ENST00000420329 HYPKQ9NX55 129 aa19.35■□□□□ 0.69
CRTC3-202ENST00000420329 NUP133Q8WUM0 1156 aa19.34■□□□□ 0.69
CRTC3-202ENST00000420329 AK7Q96M32 723 aa19.34■□□□□ 0.69
CRTC3-202ENST00000420329 STRN4Q9NRL3 753 aa19.34■□□□□ 0.69
CRTC3-202ENST00000420329 ZFYVE9O95405 1425 aa19.34■□□□□ 0.69
CRTC3-202ENST00000420329 TOM1L2Q6ZVM7 507 aa19.34■□□□□ 0.69
CRTC3-202ENST00000420329 HMGB1P09429 215 aaKnown RBP19.33■□□□□ 0.69
CRTC3-202ENST00000420329 TXLNAP40222 546 aa19.33■□□□□ 0.69
CRTC3-202ENST00000420329 ERCC4Q92889 916 aaPredicted RBP19.33■□□□□ 0.69
CRTC3-202ENST00000420329 ANKLE2Q86XL3 938 aa19.33■□□□□ 0.69
CRTC3-202ENST00000420329 KIF2AO00139 706 aaPredicted RBP19.33■□□□□ 0.68
CRTC3-202ENST00000420329 CTAGE5O15320 804 aa19.33■□□□□ 0.68
CRTC3-202ENST00000420329 KIF18AQ8NI77 898 aa19.33■□□□□ 0.68
CRTC3-202ENST00000420329 OTUD7AQ8TE49 926 aaPredicted RBP19.33■□□□□ 0.68
CRTC3-202ENST00000420329 UBE2Q2Q8WVN8 375 aa19.33■□□□□ 0.68
CRTC3-202ENST00000420329 ZNF518AQ6AHZ1 1483 aa19.33■□□□□ 0.68
CRTC3-202ENST00000420329 IFIT1P09914 478 aaKnown RBP19.33■□□□□ 0.68
CRTC3-202ENST00000420329 UBXN4Q92575 508 aa19.33■□□□□ 0.68
CRTC3-202ENST00000420329 CWC15Q9P013 229 aaKnown RBP19.33■□□□□ 0.68
CRTC3-202ENST00000420329 PHF8Q9UPP1 1060 aa19.33■□□□□ 0.68
CRTC3-202ENST00000420329 IDH1O75874 414 aaKnown RBP19.32■□□□□ 0.68
CRTC3-202ENST00000420329 CCT2P78371 535 aaKnown RBP19.32■□□□□ 0.68
CRTC3-202ENST00000420329 C8orf76Q96K31 380 aa19.32■□□□□ 0.68
CRTC3-202ENST00000420329 MAGI2Q86UL8 1455 aa19.32■□□□□ 0.68
CRTC3-202ENST00000420329 PIP4K2AP48426 406 aaPredicted RBP19.32■□□□□ 0.68
CRTC3-202ENST00000420329 PRIMPOLQ96LW4 560 aa19.32■□□□□ 0.68
CRTC3-202ENST00000420329 TCEANC2Q96MN5 208 aa19.32■□□□□ 0.68
CRTC3-202ENST00000420329 PTPRTO14522 1441 aa19.32■□□□□ 0.68
CRTC3-202ENST00000420329 ADGBQ8N7X0 1667 aa19.32■□□□□ 0.68
CRTC3-202ENST00000420329 ABCC10Q5T3U5 1492 aa19.32■□□□□ 0.68
CRTC3-202ENST00000420329 FSIP1Q8NA03 581 aa19.31■□□□□ 0.68
CRTC3-202ENST00000420329 TRMT1Q9NXH9 659 aaKnown RBP19.31■□□□□ 0.68
CRTC3-202ENST00000420329 ASXL2Q76L83 1435 aa19.31■□□□□ 0.68
CRTC3-202ENST00000420329 HS1BP3Q53T59 392 aa19.31■□□□□ 0.68
CRTC3-202ENST00000420329 NOLC1Q14978 699 aaKnown RBP eCLIP19.31■□□□□ 0.68
CRTC3-202ENST00000420329 PBRM1Q86U86 1689 aa19.3■□□□□ 0.68
CRTC3-202ENST00000420329 NOM1Q5C9Z4 860 aaKnown RBP19.3■□□□□ 0.68
CRTC3-202ENST00000420329 MTHFSDQ2M296 383 aaKnown RBP19.3■□□□□ 0.68
CRTC3-202ENST00000420329 CHPF2Q9P2E5 772 aa19.3■□□□□ 0.68
CRTC3-202ENST00000420329 EIF4G3O43432 1585 aaKnown RBP19.3■□□□□ 0.68
CRTC3-202ENST00000420329 F13A1P00488 732 aa19.3■□□□□ 0.68
CRTC3-202ENST00000420329 MAGEC2Q9UBF1 373 aaPredicted RBP19.3■□□□□ 0.68
CRTC3-202ENST00000420329 OFD1O75665 1012 aa19.3■□□□□ 0.68
CRTC3-202ENST00000420329 TRMT2AQ8IZ69 625 aaKnown RBP19.3■□□□□ 0.68
CRTC3-202ENST00000420329 TTC12Q9H892 705 aaPredicted RBP19.3■□□□□ 0.68
CRTC3-202ENST00000420329 NEK1Q96PY6 1258 aa19.29■□□□□ 0.68
CRTC3-202ENST00000420329 A0A087WZG4 1122 aa19.29■□□□□ 0.68
CRTC3-202ENST00000420329 DNM1Q05193 864 aaKnown RBP19.29■□□□□ 0.68
CRTC3-202ENST00000420329 WDR7Q9Y4E6 1490 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms